RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, human

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-222	ENST00000508500	TNFRSF1A	P19438	455 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	FAS	P25445	335 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	SLC6A9	P48067	706 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	RGS6	P49758	472 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	MMP16	P51512	607 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	HMGA2	P52926	109 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	HILS1	P60008	231 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	PPP1R8	Q12972	351 aa	Known RBP	13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	TSPAN31	Q12999	210 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	TMEM155	Q4W5P6	130 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	SLC35F1	Q5T1Q4	408 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	PEG10	Q86TG7	708 aa	Known RBP	13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	JAZF1	Q86VZ6	243 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	DEFB108B	Q8NET1	73 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	OR10AD1	Q8NGE0	317 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	OR9Q2	Q8NGE9	314 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	OR52E2	Q8NGJ4	325 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	OR4C15	Q8NGM1	316 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	OR8D4	Q8NGM9	314 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	OR10S1	Q8NGN2	331 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	GNPDA2	Q8TDQ7	276 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	SLCO4A1	Q96BD0	722 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	MAP6	Q96JE9	813 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	C1QTNF5	Q9BXJ0	243 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	PLA2G12A	Q9BZM1	189 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	C7orf69	Q9H7B7	122 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	CYB5R1	Q9UHQ9	305 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	PCDHB10	Q9UN67	800 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	PPP1R3C	Q9UQK1	317 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	LYVE1	Q9Y5Y7	322 aa		13.63	□□□□□ -0.23
LMNA-222	ENST00000508500	IGHV3-64D	A0A0J9YX35	117 aa		13.62	□□□□□ -0.23
LMNA-222	ENST00000508500		A0A1B0GWJ7	208 aa		13.62	□□□□□ -0.23
LMNA-222	ENST00000508500	IQCF6	A8MYZ5	107 aa		13.62	□□□□□ -0.23
LMNA-222	ENST00000508500	HAX1	O00165	279 aa		13.62	□□□□□ -0.23
LMNA-222	ENST00000508500	BHLHE40	O14503	412 aa		13.62	□□□□□ -0.23
LMNA-222	ENST00000508500	SELE	P16581	610 aa		13.62	□□□□□ -0.23
LMNA-222	ENST00000508500	TNFSF4	P23510	183 aa		13.62	□□□□□ -0.23
LMNA-222	ENST00000508500	VHL	P40337	213 aa		13.62	□□□□□ -0.23
LMNA-222	ENST00000508500	PMEL	P40967	661 aa		13.62	□□□□□ -0.23
LMNA-222	ENST00000508500	BTG1	P62324	171 aa		13.62	□□□□□ -0.23
LMNA-222	ENST00000508500	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
LMNA-222	ENST00000508500	TUSC1	Q2TAM9	212 aa		13.62	□□□□□ -0.23
LMNA-222	ENST00000508500	ZNF770	Q6IQ21	691 aa	Predicted RBP	13.62	□□□□□ -0.23
LMNA-222	ENST00000508500	LYPD4	Q6UWN0	246 aa		13.62	□□□□□ -0.23
LMNA-222	ENST00000508500	ATG16L2	Q8NAA4	619 aa		13.62	□□□□□ -0.23
LMNA-222	ENST00000508500	ST7L	Q8TDW4	575 aa		13.62	□□□□□ -0.23
LMNA-222	ENST00000508500	DVL3	Q92997	716 aa	Predicted RBP	13.62	□□□□□ -0.23
LMNA-222	ENST00000508500	MEGF10	Q96KG7	1140 aa		13.62	□□□□□ -0.23
LMNA-222	ENST00000508500	SLC6A7	Q99884	636 aa		13.62	□□□□□ -0.23
LMNA-222	ENST00000508500	SLC30A2	Q9BRI3	323 aa		13.62	□□□□□ -0.23
LMNA-222	ENST00000508500	ESM1	Q9NQ30	184 aa		13.62	□□□□□ -0.23
LMNA-222	ENST00000508500	VNN3	Q9NY84	501 aa		13.62	□□□□□ -0.23
LMNA-222	ENST00000508500	PPIAL4E	A0A075B759	164 aa		13.61	□□□□□ -0.23
LMNA-222	ENST00000508500	PPIAL4C	A0A0B4J2A2	164 aa		13.61	□□□□□ -0.23
LMNA-222	ENST00000508500	C5orf63	A6NC05	138 aa		13.61	□□□□□ -0.23
LMNA-222	ENST00000508500	PPIAL4D	F5H284	164 aa		13.61	□□□□□ -0.23
LMNA-222	ENST00000508500		F5H5P2	479 aa		13.61	□□□□□ -0.23
LMNA-222	ENST00000508500	IDH3B	O43837	385 aa		13.61	□□□□□ -0.23
LMNA-222	ENST00000508500	FOXH1	O75593	365 aa		13.61	□□□□□ -0.23
LMNA-222	ENST00000508500	ZNF205	O95201	554 aa		13.61	□□□□□ -0.23
LMNA-222	ENST00000508500	GAST	P01350	101 aa		13.61	□□□□□ -0.23
LMNA-222	ENST00000508500	PPIAL4F	P0DN26	164 aa		13.61	□□□□□ -0.23
LMNA-222	ENST00000508500	GATA3	P23771	443 aa		13.61	□□□□□ -0.23
LMNA-222	ENST00000508500	PYCR1	P32322	319 aa		13.61	□□□□□ -0.23
LMNA-222	ENST00000508500	RPS27	P42677	84 aa	Known RBP	13.61	□□□□□ -0.23
LMNA-222	ENST00000508500	MAGEA2	P43356	314 aa		13.61	□□□□□ -0.23
LMNA-222	ENST00000508500	CLEC12A	Q5QGZ9	265 aa		13.61	□□□□□ -0.23
LMNA-222	ENST00000508500	USP43	Q70EL4	1123 aa		13.61	□□□□□ -0.23
LMNA-222	ENST00000508500	CYB561A3	Q8NBI2	242 aa		13.61	□□□□□ -0.23
LMNA-222	ENST00000508500	BHLHE23	Q8NDY6	225 aa		13.61	□□□□□ -0.23
LMNA-222	ENST00000508500	OR5L1	Q8NGL2	311 aa		13.61	□□□□□ -0.23
LMNA-222	ENST00000508500	ZNF418	Q8TF45	676 aa	Predicted RBP	13.61	□□□□□ -0.23
LMNA-222	ENST00000508500	ZFAND2B	Q8WV99	257 aa		13.61	□□□□□ -0.23
LMNA-222	ENST00000508500	C22orf15	Q8WYQ4	148 aa		13.61	□□□□□ -0.23
LMNA-222	ENST00000508500	CENPN	Q96H22	339 aa	Predicted RBP	13.61	□□□□□ -0.23
LMNA-222	ENST00000508500	CHID1	Q9BWS9	393 aa		13.61	□□□□□ -0.23
LMNA-222	ENST00000508500	TMCC3	Q9ULS5	477 aa		13.61	□□□□□ -0.23
LMNA-222	ENST00000508500		A8MXK9	166 aa		13.6	□□□□□ -0.23
LMNA-222	ENST00000508500		F5H5K5	113 aa		13.6	□□□□□ -0.23
LMNA-222	ENST00000508500	SURF4	O15260	269 aa		13.6	□□□□□ -0.23
LMNA-222	ENST00000508500	CYB5R3	P00387	301 aa	Predicted RBP	13.6	□□□□□ -0.23
LMNA-222	ENST00000508500	HLA-DPB1	P04440	258 aa		13.6	□□□□□ -0.23
LMNA-222	ENST00000508500	WNT2	P09544	360 aa		13.6	□□□□□ -0.23
LMNA-222	ENST00000508500	NOS3	P29474	1203 aa		13.6	□□□□□ -0.23
LMNA-222	ENST00000508500	MAB21L1	Q13394	359 aa		13.6	□□□□□ -0.23
LMNA-222	ENST00000508500	GK3P	Q14409	553 aa		13.6	□□□□□ -0.23
LMNA-222	ENST00000508500	GK2	Q14410	553 aa	Predicted RBP	13.6	□□□□□ -0.23
LMNA-222	ENST00000508500	ATP6AP1	Q15904	470 aa		13.6	□□□□□ -0.23
LMNA-222	ENST00000508500	KLF17	Q5JT82	389 aa	Predicted RBP	13.6	□□□□□ -0.23
LMNA-222	ENST00000508500	FAM201A	Q5SY85	155 aa		13.6	□□□□□ -0.23
LMNA-222	ENST00000508500	OGFRL1	Q5TC84	451 aa	Predicted RBP	13.6	□□□□□ -0.23
LMNA-222	ENST00000508500	SPIC	Q8N5J4	248 aa		13.6	□□□□□ -0.23
LMNA-222	ENST00000508500	ZDHHC22	Q8N966	263 aa		13.6	□□□□□ -0.23
LMNA-222	ENST00000508500	OR13G1	Q8NGZ3	307 aa		13.6	□□□□□ -0.23
LMNA-222	ENST00000508500	NANP	Q8TBE9	248 aa		13.6	□□□□□ -0.23
LMNA-222	ENST00000508500	ZNF582	Q96NG8	517 aa	Predicted RBP	13.6	□□□□□ -0.23
LMNA-222	ENST00000508500	PITX2	Q99697	317 aa		13.6	□□□□□ -0.23
LMNA-222	ENST00000508500	ATF6B	Q99941	703 aa		13.6	□□□□□ -0.23
LMNA-222	ENST00000508500	TMEM165	Q9HC07	324 aa		13.6	□□□□□ -0.23

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