RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 DUSP1P28562 367 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 TGFBR2P37173 567 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 MAGEB1P43366 347 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 NUDT6P53370 316 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 MLLT10P55197 1068 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 PLCXD2Q0VAA5 305 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 ST3GAL4Q11206 333 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 PDSS1Q5T2R2 415 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 CARD17Q5XLA6 110 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 OPN5Q6U736 354 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 C5orf46Q6UWT4 87 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 OLIG3Q7RTU3 272 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 STX19Q8N4C7 294 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 OR6T1Q8NGN1 323 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 FNDC8Q8TC99 324 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 ADAMTS17Q8TE56 1095 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 TRUB1Q8WWH5 349 aaKnown RBP6.28□□□□□ -1.4
CLCN3-206ENST00000507875 SLC38A4Q969I6 547 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 SLC25A28Q96A46 364 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 DEFB126Q9BYW3 111 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 ABCB9Q9NP78 766 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 KLHL1Q9NR64 748 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 CNOT2Q9NZN8 540 aaKnown RBP6.28□□□□□ -1.4
CLCN3-206ENST00000507875 KCNE5Q9UJ90 142 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 YARS2Q9Y2Z4 477 aaKnown RBP6.28□□□□□ -1.4
CLCN3-206ENST00000507875 HS3ST3B1Q9Y662 390 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 NSG1A0A0A6YYJ2 146 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 TRBV11-1A0A0K0K1C0 115 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 M0R129 80 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 M0R3G1 203 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 TP53I11O14683 189 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 MED6O75586 246 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 UTS2O95399 124 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 IGKV1D-16P01601 117 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 RLN1P04808 185 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 CNR1P21554 472 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 NR0B1P51843 470 aaKnown RBP6.28□□□□□ -1.4
CLCN3-206ENST00000507875 UGT2B15P54855 530 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 DLX5P56178 289 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 TAS2R41P59536 307 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 SUMO2P61956 95 aaKnown RBP6.28□□□□□ -1.4
CLCN3-206ENST00000507875 LSM3P62310 102 aaKnown RBP6.28□□□□□ -1.4
CLCN3-206ENST00000507875 MAB21L1Q13394 359 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 KLHL22Q53GT1 634 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 MRPL2Q5T653 305 aaKnown RBP6.28□□□□□ -1.4
CLCN3-206ENST00000507875 PLCXD3Q63HM9 321 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 LINC00299Q6ZSB3 139 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 TIPARPQ7Z3E1 657 aaKnown RBP6.28□□□□□ -1.4
CLCN3-206ENST00000507875 LINC01356Q8N9X3 169 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 SLC37A3Q8NCC5 494 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 GJC3Q8NFK1 279 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 OR9K2Q8NGE7 335 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 OR13C3Q8NGS6 347 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 OSTF1Q92882 214 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 LGALS12Q96DT0 336 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 ARSGQ96EG1 525 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 ZC3HAV1LQ96H79 300 aaKnown RBP6.28□□□□□ -1.4
CLCN3-206ENST00000507875 MCHR1Q99705 422 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 ZCCHC4Q9H5U6 513 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 CLN6Q9NWW5 311 aa6.28□□□□□ -1.4
CLCN3-206ENST00000507875 ZNF223Q9UK11 482 aaPredicted RBP6.28□□□□□ -1.4
CLCN3-206ENST00000507875 KMT2BQ9UMN6 2715 aaPredicted RBP6.28□□□□□ -1.4
CLCN3-206ENST00000507875 LOC100509620A0A075B734 347 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 IGLV3-32A0A0A0MS00 114 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 A0A1B0GV90 55 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 EFCAB10A6NFE3 127 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 UNC119BA6NIH7 251 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 REM1O75628 298 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 NADKO95544 446 aaPredicted RBP6.27□□□□□ -1.4
CLCN3-206ENST00000507875 SERPINA7P05543 415 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 LIPCP11150 499 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 ZNF136P52737 540 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 NCS1P62166 190 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 SNRPGP62308 76 aaKnown RBP6.27□□□□□ -1.4
CLCN3-206ENST00000507875 RAB11AP62491 216 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 PPIAP62937 165 aaKnown RBP6.27□□□□□ -1.4
CLCN3-206ENST00000507875 RAB11BQ15907 218 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 DGUOKQ16854 277 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 CCNJQ5T5M9 372 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 SLX4IPQ5VYV7 408 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 Q6ZWC4 215 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 HMGN2P46Q86SG4 172 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 CLDN22Q8N7P3 220 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 OR11G2Q8NGC1 345 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 DYNC2LI1Q8TCX1 351 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 GNPDA2Q8TDQ7 276 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 ACOT11Q8WXI4 607 aaPredicted RBP6.27□□□□□ -1.4
CLCN3-206ENST00000507875 FGF11Q92914 225 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 HGDQ93099 445 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 C14orf79Q96F83 325 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 SH3YL1Q96HL8 342 aaPredicted RBP6.27□□□□□ -1.4
CLCN3-206ENST00000507875 CDCA4Q9BXL8 241 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 SLC19A3Q9BZV2 496 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 TOLLIPQ9H0E2 274 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 CPNE5Q9HCH3 593 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 UFSP2Q9NUQ7 469 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 TNFRSF18Q9Y5U5 241 aa6.27□□□□□ -1.4
CLCN3-206ENST00000507875 SPEGQ15772 3267 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 ASPMQ8IZT6 3477 aa6.27□□□□□ -1.41
CLCN3-206ENST00000507875 A0A087WV48 116 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms