RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 PLATP00750 562 aa9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 HLA-DQA2P01906 255 aa9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 LCATP04180 440 aa9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 SEMG1P04279 462 aa9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 RNASE1P07998 156 aaKnown RBP9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 PPIAL4GP0DN37 164 aa9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 IRF2P14316 349 aa9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 MTNR1AP48039 350 aa9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 PITPNBP48739 271 aa9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 SMIM11AP58511 58 aa9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 TRAP1Q12931 704 aaKnown RBP9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 GK2Q14410 553 aaPredicted RBP9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 SLC9A3R2Q15599 337 aa9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 SLC36A3Q495N2 470 aa9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 PRR31Q5SQ13 230 aa9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 PRAMEF6Q5VXH4 476 aa9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 C9orf139Q6ZV77 190 aa9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 NLRC3Q7RTR2 1065 aa9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 NAA40Q86UY6 237 aa9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 C19orf18Q8NEA5 215 aa9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 OR2AJ1Q8NGZ0 328 aa9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 TAF15Q92804 592 aaKnown RBP eCLIP9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 ELAC2Q9BQ52 826 aaKnown RBP9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 MYLK2Q9H1R3 596 aa9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 PNRC2Q9NPJ4 139 aaKnown RBP9.64□□□□□ -0.87
HMGCS1-204ENST00000507293 OR6C68A6NDL8 312 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 OR10H3O60404 316 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 FAM20BO75063 409 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 FSTL3O95633 263 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 NOS3P29474 1203 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 PRDX6P30041 224 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 GGT2P36268 569 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 CD200P41217 278 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 GATA4P43694 442 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 RAD23AP54725 363 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 ECH1Q13011 328 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 MALLQ13021 153 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 MAB21L1Q13394 359 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 LYPD2Q6UXB3 125 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 ZNF620Q6ZNG0 422 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 DCDC5Q6ZRR9 648 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 MRPL21Q7Z2W9 205 aaKnown RBP9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 ZBTB46Q86UZ6 589 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 OR11L1Q8NGX0 322 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 Q8TCH9 128 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 SLC25A28Q96A46 364 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 SLCO4A1Q96BD0 722 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 PYURFQ96I23 114 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 NUDT16L1Q9BRJ7 211 aaKnown RBP9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 CDADC1Q9BWV3 514 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 GORASP2Q9H8Y8 452 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 UNKLQ9H9P5 680 aaKnown RBP9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 UFSP2Q9NUQ7 469 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 MRPL22Q9NWU5 206 aaKnown RBP9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 CLN8Q9UBY8 286 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 CYB5R1Q9UHQ9 305 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 MAGEL2Q9UJ55 1249 aa9.63□□□□□ -0.87
HMGCS1-204ENST00000507293 KIR2DS1A0A191URI9 304 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 CLDN34H7C241 214 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 M0R135 149 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 FABP3P05413 133 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 RRM2P31350 389 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 PYCR1P32322 319 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 IFNGR2P38484 337 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 RPS27P42677 84 aaKnown RBP9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 GSSP48637 474 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 TPTEP56180 551 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 IL13RA1P78552 427 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 HOXA4Q00056 320 aaPredicted RBP9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.62□□□□□ -0.876e-7■■□□□ 14.5
HMGCS1-204ENST00000507293 OR8G1Q15617 311 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 MPPED2Q15777 294 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 CLEC12AQ5QGZ9 265 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 SLC35F1Q5T1Q4 408 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 WDR25Q64LD2 544 aaPredicted RBP9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 BRD3OSQ6XYD6 125 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 PGAP1Q75T13 922 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 FITM2Q8N6M3 262 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 CELF2-AS1Q8N7Q2 184 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 OR10S1Q8NGN2 331 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 GNPDA2Q8TDQ7 276 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 SPRYD4Q8WW59 207 aaPredicted RBP9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 MCUR1Q96AQ8 359 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 ZNF799Q96GE5 643 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 MAP6Q96JE9 813 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 NSMCE2Q96MF7 247 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 ZNF696Q9H7X3 374 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 TMCC3Q9ULS5 477 aa9.62□□□□□ -0.87
HMGCS1-204ENST00000507293 CD300LBA8K4G0 201 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 C22orf46C9J442 243 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 DYNC1I1O14576 645 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 PHYHO14832 338 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 ARPC2O15144 300 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 KCNAB3O43448 404 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 IDH3BO43837 385 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 PSKH1P11801 424 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 HSD17B1P14061 328 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 ZNF823P16415 610 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 CA6P23280 308 aa9.61□□□□□ -0.87
HMGCS1-204ENST00000507293 ANOS1P23352 680 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms