RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 FGFBP3Q8TAT2 258 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 CYGBQ8WWM9 190 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 ERGIC1Q969X5 290 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 OTULINQ96BN8 352 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 HAVCR1Q96D42 359 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 ZMYND19Q96E35 227 aaPredicted RBP7.29□□□□□ -1.24
PDGFC-205ENST00000506880 MARS2Q96GW9 593 aaKnown RBP7.29□□□□□ -1.24
PDGFC-205ENST00000506880 MAP6Q96JE9 813 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 TECTBQ96PL2 329 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 OR8B4Q96RC9 309 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 CCL19Q99731 98 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 RAB1BQ9H0U4 201 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 OR10A2Q9H208 303 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 SCN3BQ9NY72 215 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 EXOSC1Q9Y3B2 195 aaKnown RBP7.29□□□□□ -1.24
PDGFC-205ENST00000506880 POLQO75417 2590 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 LRBAP50851 2863 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 PLSCR5A0PG75 271 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 CYSRT1A8MQ03 144 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 IQCF6A8MYZ5 107 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 ANKRD65E5RJM6 399 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 DENRO43583 198 aaKnown RBP7.28□□□□□ -1.24
PDGFC-205ENST00000506880 ENTPD6O75354 484 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 MPZL1O95297 269 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 SCG5P05408 212 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 GYPBP06028 91 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 CD55P08174 381 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 OR4A8P0C604 315 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 CLUP10909 449 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 MYL12AP19105 171 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 CD53P19397 219 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 TNFSF4P23510 183 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 TGM4P49221 684 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 CCR9P51686 369 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 TAS2R43P59537 309 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 IL5RAQ01344 420 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 BDH1Q02338 343 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 GALEQ14376 348 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 LRRC36Q1X8D7 754 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 DEFB113Q30KQ7 82 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 ZIK1Q3SY52 487 aaPredicted RBP7.28□□□□□ -1.24
PDGFC-205ENST00000506880 CDONQ4KMG0 1287 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 RBM48Q5RL73 367 aaKnown RBP7.28□□□□□ -1.24
PDGFC-205ENST00000506880 ZNF684Q5T5D7 378 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 ZNF322Q6U7Q0 402 aaPredicted RBP7.28□□□□□ -1.24
PDGFC-205ENST00000506880 TMPRSS11AQ6ZMR5 421 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 OR1J1Q8NGS3 322 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 AKR7LQ8NHP1 331 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 THEM6Q8WUY1 208 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 REPIN1Q9BWE0 567 aaKnown RBP7.28□□□□□ -1.24
PDGFC-205ENST00000506880 CHCHD3Q9NX63 227 aaKnown RBP7.28□□□□□ -1.24
PDGFC-205ENST00000506880 MRPL15Q9P015 296 aaKnown RBP7.28□□□□□ -1.24
PDGFC-205ENST00000506880 NKX1-2Q9UD57 310 aaPredicted RBP7.28□□□□□ -1.24
PDGFC-205ENST00000506880 NUFIP1Q9UHK0 495 aaKnown RBP7.28□□□□□ -1.24
PDGFC-205ENST00000506880 DIMT1Q9UNQ2 313 aaKnown RBP7.28□□□□□ -1.24
PDGFC-205ENST00000506880 CAB39Q9Y376 341 aaPredicted RBP7.28□□□□□ -1.24
PDGFC-205ENST00000506880 TPRKBQ9Y3C4 175 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 PCDHGB5Q9Y5G0 923 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 SNX5Q9Y5X3 404 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 FBN2P35556 2912 aa7.28□□□□□ -1.24
PDGFC-205ENST00000506880 A0A1W2PR80 420 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 TMEM129A0AVI4 362 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 TVP23AA6NH52 213 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 METTL15A6NJ78 407 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 GMDSO60547 372 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 WBP4O75554 376 aaKnown RBP7.27□□□□□ -1.25
PDGFC-205ENST00000506880 ISG15P05161 165 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 CD1AP06126 327 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 LCKP06239 509 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 CELA3BP08861 270 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 UBCP0CG48 685 aaKnown RBP7.27□□□□□ -1.25
PDGFC-205ENST00000506880 COL8A1P27658 744 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 THBS4P35443 961 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 WNT5AP41221 380 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 EFNA4P52798 201 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 TUBA1BP68363 451 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 TUBA4AP68366 448 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 ZNF91Q05481 1191 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 SLC3A1Q07837 685 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 CDK5R2Q13319 367 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 TESK1Q15569 626 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 MEP1BQ16820 701 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 RSPO1Q2MKA7 263 aaPredicted RBP7.27□□□□□ -1.25
PDGFC-205ENST00000506880 SPNS3Q6ZMD2 512 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 TUBA1AQ71U36 451 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 PRSS45Q7RTY3 260 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 ZNF283Q8N7M2 679 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 BBS1Q8NFJ9 593 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 OR51L1Q8NGJ5 315 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 OR51G2Q8NGK0 314 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 OR10S1Q8NGN2 331 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 OR13G1Q8NGZ3 307 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 OR52N1Q8NH53 320 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 ABHD4Q8TB40 342 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 KLF14Q8TD94 323 aaPredicted RBP7.27□□□□□ -1.25
PDGFC-205ENST00000506880 MYDGFQ969H8 173 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 RNFT2Q96EX2 444 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 EGLN1Q9GZT9 426 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 MED20Q9H944 212 aa7.27□□□□□ -1.25
PDGFC-205ENST00000506880 UBTD1Q9HAC8 227 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms