RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 KCNMB1Q16558 191 aa10.73□□□□□ -0.69
LIN54-206ENST00000506560 ZNF544Q6NX49 715 aa10.73□□□□□ -0.69
LIN54-206ENST00000506560 JMJD6Q6NYC1 403 aaPredicted RBP10.73□□□□□ -0.69
LIN54-206ENST00000506560 MZT2BQ6NZ67 158 aa10.73□□□□□ -0.69
LIN54-206ENST00000506560 HDDC2Q7Z4H3 204 aa10.73□□□□□ -0.69
LIN54-206ENST00000506560 C20orf196Q8IYI0 205 aa10.73□□□□□ -0.69
LIN54-206ENST00000506560 ZNF283Q8N7M2 679 aa10.73□□□□□ -0.69
LIN54-206ENST00000506560 OR13C9Q8NGT0 318 aa10.73□□□□□ -0.69
LIN54-206ENST00000506560 ZC3HAV1LQ96H79 300 aaKnown RBP10.73□□□□□ -0.69
LIN54-206ENST00000506560 ST6GAL2Q96JF0 529 aa10.73□□□□□ -0.69
LIN54-206ENST00000506560 FYTTD1Q96QD9 318 aaKnown RBP10.73□□□□□ -0.69
LIN54-206ENST00000506560 ZMAT3Q9HA38 289 aaKnown RBP10.73□□□□□ -0.69
LIN54-206ENST00000506560 RCE1Q9Y256 329 aa10.73□□□□□ -0.69
LIN54-206ENST00000506560 GJE1A6NN92 205 aa10.73□□□□□ -0.69
LIN54-206ENST00000506560 CTAG2O75638 210 aa10.73□□□□□ -0.69
LIN54-206ENST00000506560 FOXG1P55316 489 aaPredicted RBP10.73□□□□□ -0.69
LIN54-206ENST00000506560 CLDN18P56856 261 aa10.73□□□□□ -0.69
LIN54-206ENST00000506560 PMP22Q01453 160 aa10.73□□□□□ -0.69
LIN54-206ENST00000506560 RAB11BQ15907 218 aa10.73□□□□□ -0.69
LIN54-206ENST00000506560 SFRP5Q5T4F7 317 aa10.73□□□□□ -0.69
LIN54-206ENST00000506560 C9orf135Q5VTT2 229 aa10.73□□□□□ -0.69
LIN54-206ENST00000506560 TMEM244Q5VVB8 128 aa10.73□□□□□ -0.69
LIN54-206ENST00000506560 ABLIM2Q6H8Q1 611 aa10.73□□□□□ -0.69
LIN54-206ENST00000506560 ZNF704Q6ZNC4 412 aaPredicted RBP10.73□□□□□ -0.69
LIN54-206ENST00000506560 S100A16Q96FQ6 103 aaKnown RBP10.73□□□□□ -0.69
LIN54-206ENST00000506560 RNF170Q96K19 258 aa10.73□□□□□ -0.69
LIN54-206ENST00000506560 BEX1Q9HBH7 125 aa10.73□□□□□ -0.69
LIN54-206ENST00000506560 NUDT15Q9NV35 164 aa10.73□□□□□ -0.69
LIN54-206ENST00000506560 UBCP0CG48 685 aaKnown RBP10.72□□□□□ -0.69
LIN54-206ENST00000506560 FSTP19883 344 aa10.72□□□□□ -0.69
LIN54-206ENST00000506560 DCTDP32321 178 aa10.72□□□□□ -0.69
LIN54-206ENST00000506560 CASRP41180 1078 aa10.72□□□□□ -0.69
LIN54-206ENST00000506560 MEOX1P50221 254 aa10.72□□□□□ -0.69
LIN54-206ENST00000506560 HGFACQ04756 655 aa10.72□□□□□ -0.69
LIN54-206ENST00000506560 MOGAT2Q3SYC2 334 aa10.72□□□□□ -0.69
LIN54-206ENST00000506560 TBRG1Q3YBR2 411 aa10.72□□□□□ -0.69
LIN54-206ENST00000506560 SFRP4Q6FHJ7 346 aaPredicted RBP10.72□□□□□ -0.69
LIN54-206ENST00000506560 AAED1Q7RTV5 226 aa10.72□□□□□ -0.69
LIN54-206ENST00000506560 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.72□□□□□ -0.69
LIN54-206ENST00000506560 LYPD6Q86Y78 171 aa10.72□□□□□ -0.69
LIN54-206ENST00000506560 LYZL4Q96KX0 146 aa10.72□□□□□ -0.69
LIN54-206ENST00000506560 RGS13O14921 159 aa10.72□□□□□ -0.69
LIN54-206ENST00000506560 HTR2CP28335 458 aa10.72□□□□□ -0.69
LIN54-206ENST00000506560 SLC6A9P48067 706 aa10.72□□□□□ -0.69
LIN54-206ENST00000506560 MDS2Q8NDY4 140 aa10.72□□□□□ -0.69
LIN54-206ENST00000506560 FNDC9Q8TBE3 224 aa10.72□□□□□ -0.69
LIN54-206ENST00000506560 FAM46BQ96A09 425 aa10.72□□□□□ -0.69
LIN54-206ENST00000506560 MARVELD1Q9BSK0 173 aa10.72□□□□□ -0.69
LIN54-206ENST00000506560 CNTD2Q9H8S5 307 aa10.72□□□□□ -0.69
LIN54-206ENST00000506560 CKLFQ9UBR5 152 aa10.72□□□□□ -0.69
LIN54-206ENST00000506560 CIB4A0PJX0 185 aa10.71□□□□□ -0.69
LIN54-206ENST00000506560 INMT-MINDY4F8WBC2 141 aa10.71□□□□□ -0.69
LIN54-206ENST00000506560 SP1P08047 785 aa10.71□□□□□ -0.69
LIN54-206ENST00000506560 ZNF133P52736 654 aaPredicted RBP10.71□□□□□ -0.69
LIN54-206ENST00000506560 PLGLB1Q02325 96 aa10.71□□□□□ -0.69
LIN54-206ENST00000506560 ZNF813Q6ZN06 617 aa10.71□□□□□ -0.69
LIN54-206ENST00000506560 DEFB127Q9H1M4 99 aa10.71□□□□□ -0.69
LIN54-206ENST00000506560 RANGRFQ9HD47 186 aaPredicted RBP10.71□□□□□ -0.69
LIN54-206ENST00000506560 FLVCR2Q9UPI3 526 aa10.71□□□□□ -0.69
LIN54-206ENST00000506560 PRR14LQ5THK1 2151 aa10.71□□□□□ -0.69
LIN54-206ENST00000506560 ATMQ13315 3056 aa10.71□□□□□ -0.69
LIN54-206ENST00000506560 PRR33A8MZF0 331 aa10.71□□□□□ -0.69
LIN54-206ENST00000506560 GSTZ1O43708 216 aaPredicted RBP10.71□□□□□ -0.69
LIN54-206ENST00000506560 GLSO94925 669 aaPredicted RBP10.71□□□□□ -0.69
LIN54-206ENST00000506560 MRPS15P82914 257 aaKnown RBP10.71□□□□□ -0.69
LIN54-206ENST00000506560 PITPNAQ00169 270 aa10.71□□□□□ -0.69
LIN54-206ENST00000506560 CD83Q01151 205 aa10.71□□□□□ -0.69
LIN54-206ENST00000506560 NDUFA5Q16718 116 aa10.71□□□□□ -0.69
LIN54-206ENST00000506560 CEACAM16Q2WEN9 425 aa10.71□□□□□ -0.69
LIN54-206ENST00000506560 FOXL2NBQ6ZUU3 175 aa10.71□□□□□ -0.69
LIN54-206ENST00000506560 AKR7LQ8NHP1 331 aa10.71□□□□□ -0.69
LIN54-206ENST00000506560 FER1L6-AS2Q96M78 137 aa10.71□□□□□ -0.69
LIN54-206ENST00000506560 SF3B5Q9BWJ5 86 aaKnown RBP10.71□□□□□ -0.69
LIN54-206ENST00000506560 ZNF552Q9H707 407 aaPredicted RBP10.71□□□□□ -0.69
LIN54-206ENST00000506560 PLSCR3Q9NRY6 295 aa10.71□□□□□ -0.69
LIN54-206ENST00000506560 PLEK2Q9NYT0 353 aa10.71□□□□□ -0.69
LIN54-206ENST00000506560 ETV7Q9Y603 341 aa10.71□□□□□ -0.69
LIN54-206ENST00000506560 TNRC6AQ8NDV7 1962 aaKnown RBP10.71□□□□□ -0.7
LIN54-206ENST00000506560 TRAV18A0A075B6X5 111 aa10.71□□□□□ -0.7
LIN54-206ENST00000506560 LOC100289279A0A1B0GTE1 492 aa10.71□□□□□ -0.7
LIN54-206ENST00000506560 WIPF3A6NGB9 483 aa10.71□□□□□ -0.7
LIN54-206ENST00000506560 HPNP05981 417 aa10.71□□□□□ -0.7
LIN54-206ENST00000506560 ARSBP15848 533 aa10.71□□□□□ -0.7
LIN54-206ENST00000506560 LSM6P62312 80 aaKnown RBP10.71□□□□□ -0.7
LIN54-206ENST00000506560 SNAI3Q3KNW1 292 aa10.71□□□□□ -0.7
LIN54-206ENST00000506560 ZFP69Q49AA0 526 aa10.71□□□□□ -0.7
LIN54-206ENST00000506560 GLT8D1Q68CQ7 371 aa10.71□□□□□ -0.7
LIN54-206ENST00000506560 ZNF774Q6NX45 483 aa10.71□□□□□ -0.7
LIN54-206ENST00000506560 ANKRD16Q6P6B7 361 aa10.71□□□□□ -0.7
LIN54-206ENST00000506560 BEST4Q8NFU0 473 aa10.71□□□□□ -0.7
LIN54-206ENST00000506560 NPRL2Q8WTW4 380 aa10.71□□□□□ -0.7
LIN54-206ENST00000506560 RAB40AQ8WXH6 277 aa10.71□□□□□ -0.7
LIN54-206ENST00000506560 CMBLQ96DG6 245 aa10.71□□□□□ -0.7
LIN54-206ENST00000506560 MS4A3Q96HJ5 214 aa10.71□□□□□ -0.7
LIN54-206ENST00000506560 CMTM3Q96MX0 182 aa10.71□□□□□ -0.7
LIN54-206ENST00000506560 ATG5Q9H1Y0 275 aa10.71□□□□□ -0.7
LIN54-206ENST00000506560 NKIRAS2Q9NYR9 191 aa10.71□□□□□ -0.7
LIN54-206ENST00000506560 A0A1B0GVI7 797 aa10.7□□□□□ -0.7
LIN54-206ENST00000506560 GGT3PA6NGU5 568 aa10.7□□□□□ -0.7
LIN54-206ENST00000506560 CTDSPLO15194 276 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms