RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 LRBAP50851 2863 aa4□□□□□ -1.77
HERC4-213ENST00000506515 KIR2DL5BA0A0G2JN68 375 aa4□□□□□ -1.77
HERC4-213ENST00000506515 KIR2DL5BA0A0G2JPC4 375 aa4□□□□□ -1.77
HERC4-213ENST00000506515 PVALEFA0A1B0GWK0 134 aa4□□□□□ -1.77
HERC4-213ENST00000506515 GJE1A6NN92 205 aa4□□□□□ -1.77
HERC4-213ENST00000506515 D6RAR5 112 aa4□□□□□ -1.77
HERC4-213ENST00000506515 F5H5T6 163 aa4□□□□□ -1.77
HERC4-213ENST00000506515 KPNA3O00505 521 aaPredicted RBP4□□□□□ -1.77
HERC4-213ENST00000506515 CALUO43852 315 aaPredicted RBP4□□□□□ -1.77
HERC4-213ENST00000506515 CLDN11O75508 207 aa4□□□□□ -1.77
HERC4-213ENST00000506515 ASS1P00966 412 aaKnown RBP4□□□□□ -1.77
HERC4-213ENST00000506515 CHTF8P0CG12 524 aa4□□□□□ -1.77
HERC4-213ENST00000506515 GIMD1P0DJR0 217 aa4□□□□□ -1.77
HERC4-213ENST00000506515 ICAM2P13598 275 aa4□□□□□ -1.77
HERC4-213ENST00000506515 ATP1B2P14415 290 aaPredicted RBP4□□□□□ -1.77
HERC4-213ENST00000506515 CD70P32970 193 aa4□□□□□ -1.77
HERC4-213ENST00000506515 BTCP35070 178 aa4□□□□□ -1.77
HERC4-213ENST00000506515 CDH4P55283 916 aa4□□□□□ -1.77
HERC4-213ENST00000506515 RPL23AP62750 156 aaKnown RBP4□□□□□ -1.77
HERC4-213ENST00000506515 BST1Q10588 318 aa4□□□□□ -1.77
HERC4-213ENST00000506515 BST2Q10589 180 aaKnown RBP4□□□□□ -1.77
HERC4-213ENST00000506515 MRPL28Q13084 256 aaKnown RBP4□□□□□ -1.77
HERC4-213ENST00000506515 PDIA2Q13087 525 aaKnown RBP4□□□□□ -1.77
HERC4-213ENST00000506515 CTSL3PQ5NE16 218 aa4□□□□□ -1.77
HERC4-213ENST00000506515 CASC10Q5T4H9 136 aa4□□□□□ -1.77
HERC4-213ENST00000506515 C1orf94Q6P1W5 598 aa4□□□□□ -1.77
HERC4-213ENST00000506515 GUSBP11Q6P575 273 aa4□□□□□ -1.77
HERC4-213ENST00000506515 H2BFWTQ7Z2G1 175 aa4□□□□□ -1.77
HERC4-213ENST00000506515 KRTAP11-1Q8IUC1 163 aa4□□□□□ -1.77
HERC4-213ENST00000506515 KIR2DL5AQ8N109 375 aa4□□□□□ -1.77
HERC4-213ENST00000506515 UBE2J2Q8N2K1 259 aa4□□□□□ -1.77
HERC4-213ENST00000506515 TPRX1Q8N7U7 411 aa4□□□□□ -1.77
HERC4-213ENST00000506515 C12orf29Q8N999 325 aa4□□□□□ -1.77
HERC4-213ENST00000506515 SDR9C7Q8NEX9 313 aa4□□□□□ -1.77
HERC4-213ENST00000506515 OR1L6Q8NGR2 347 aa4□□□□□ -1.77
HERC4-213ENST00000506515 KIR2DL5BQ8NHK3 375 aa4□□□□□ -1.77
HERC4-213ENST00000506515 PYROXD1Q8WU10 500 aa4□□□□□ -1.77
HERC4-213ENST00000506515 DNAJC19Q96DA6 116 aa4□□□□□ -1.77
HERC4-213ENST00000506515 TM4SF19Q96DZ7 209 aa4□□□□□ -1.77
HERC4-213ENST00000506515 BMFQ96LC9 184 aa4□□□□□ -1.77
HERC4-213ENST00000506515 CNN2Q99439 309 aaKnown RBP4□□□□□ -1.77
HERC4-213ENST00000506515 GBA3Q9H227 469 aa4□□□□□ -1.77
HERC4-213ENST00000506515 ANKRD19PQ9H560 264 aa4□□□□□ -1.77
HERC4-213ENST00000506515 SIAEQ9HAT2 523 aa4□□□□□ -1.77
HERC4-213ENST00000506515 MMP26Q9NRE1 261 aa4□□□□□ -1.77
HERC4-213ENST00000506515 AGPAT3Q9NRZ7 376 aa4□□□□□ -1.77
HERC4-213ENST00000506515 NAV3Q8IVL0 2385 aa4□□□□□ -1.77
HERC4-213ENST00000506515 SETD2Q9BYW2 2564 aaPredicted RBP3.99□□□□□ -1.77
HERC4-213ENST00000506515 PANO1I0J062 215 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 HCRTO43612 131 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 DPM1O60762 260 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 INSP01308 110 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 GAPDHP04406 335 aaKnown RBP3.99□□□□□ -1.77
HERC4-213ENST00000506515 TBPP20226 339 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 PFN3P60673 137 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 UNC119Q13432 240 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 FZD2Q14332 565 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 DEFB133Q30KQ1 61 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 C6orf226Q5I0X4 101 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 SETD3Q86TU7 594 aaPredicted RBP3.99□□□□□ -1.77
HERC4-213ENST00000506515 TMEM61Q8N0U2 210 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 MYDGFQ969H8 173 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 ISG20Q96AZ6 181 aaKnown RBP3.99□□□□□ -1.77
HERC4-213ENST00000506515 PLEKHA8Q96JA3 519 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 FCRL1Q96LA6 429 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 NRIP2Q9BQI9 281 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 PELOQ9BRX2 385 aaKnown RBP3.99□□□□□ -1.77
HERC4-213ENST00000506515 FBXO8Q9NRD0 319 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 FAM49BQ9NUQ9 324 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 SLC39A1Q9NY26 324 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 SLC7A8Q9UHI5 535 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 NEU3Q9UQ49 428 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 HS3ST2Q9Y278 367 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 SLC25A15Q9Y619 301 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 IKBKGQ9Y6K9 419 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 UTP20O75691 2785 aaKnown RBP3.99□□□□□ -1.77
HERC4-213ENST00000506515 PCNX1Q96RV3 2341 aa3.99□□□□□ -1.77
HERC4-213ENST00000506515 PLXNA2O75051 1894 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 A0A1B0GUH1 482 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 TRIM49D1C9J1S8 452 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 RAD1O60671 282 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 IGLV3-27P01718 113 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 KRT7P08729 469 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 HOXC4P09017 264 aaPredicted RBP3.98□□□□□ -1.77
HERC4-213ENST00000506515 ZNF17P17021 662 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 SLC2A5P22732 501 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 CMA1P23946 247 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 SH3BGRP55822 239 aaPredicted RBP3.98□□□□□ -1.77
HERC4-213ENST00000506515 CCL7P80098 99 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 ACVR1Q04771 509 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 GK3PQ14409 553 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 KCTD21Q4G0X4 260 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 PIP5KL1Q5T9C9 394 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 RNF175Q8N4F7 328 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 LINC01555Q8NAE3 123 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 RNF138Q8WVD3 245 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 NDRG1Q92597 394 aaKnown RBP3.98□□□□□ -1.77
HERC4-213ENST00000506515 N4BP2L2Q92802 583 aaPredicted RBP3.98□□□□□ -1.77
HERC4-213ENST00000506515 SLC35E1Q96K37 410 aa3.98□□□□□ -1.77
HERC4-213ENST00000506515 MS4A4EQ96PG1 132 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms