RNA–Protein interactions for RNA: ENST00000505220.1

RBM47-204, Transcript of RNA binding motif protein 47, human

TSL 2

Gene RBM47, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM47-204	ENST00000505220	HOXA4	Q00056	320 aa	Predicted RBP	13.92	□□□□□ -0.18
RBM47-204	ENST00000505220	OR8G1	Q15617	311 aa		13.92	□□□□□ -0.18
RBM47-204	ENST00000505220	BLOC1S3	Q6QNY0	202 aa		13.92	□□□□□ -0.18
RBM47-204	ENST00000505220	PPP1R35	Q8TAP8	253 aa		13.92	□□□□□ -0.18
RBM47-204	ENST00000505220	LRRC8C	Q8TDW0	803 aa		13.92	□□□□□ -0.18
RBM47-204	ENST00000505220	AEN	Q8WTP8	325 aa	Known RBP	13.92	□□□□□ -0.18
RBM47-204	ENST00000505220	POLR2J2	Q9GZM3	115 aa	Known RBP	13.92	□□□□□ -0.18
RBM47-204	ENST00000505220	POLR2J3	Q9H1A7	115 aa	Known RBP	13.92	□□□□□ -0.18
RBM47-204	ENST00000505220	CCDC167	Q9P0B6	97 aa		13.92	□□□□□ -0.18
RBM47-204	ENST00000505220	DNAJB11	Q9UBS4	358 aa		13.92	□□□□□ -0.18
RBM47-204	ENST00000505220	POLR1D	Q9Y2S0	133 aa		13.92	□□□□□ -0.18
RBM47-204	ENST00000505220	XKRY	O14609	159 aa		13.91	□□□□□ -0.18
RBM47-204	ENST00000505220	SNN	O75324	88 aa	Predicted RBP	13.91	□□□□□ -0.18
RBM47-204	ENST00000505220	OR5F1	O95221	314 aa		13.91	□□□□□ -0.18
RBM47-204	ENST00000505220	SAA4	P35542	130 aa		13.91	□□□□□ -0.18
RBM47-204	ENST00000505220	CCDC92	Q53HC0	331 aa	Predicted RBP	13.91	□□□□□ -0.18
RBM47-204	ENST00000505220	ZBTB37	Q5TC79	503 aa		13.91	□□□□□ -0.18
RBM47-204	ENST00000505220	NDUFA11	Q86Y39	141 aa		13.91	□□□□□ -0.18
RBM47-204	ENST00000505220	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.91	□□□□□ -0.18
RBM47-204	ENST00000505220	TMEM109	Q9BVC6	243 aa		13.91	□□□□□ -0.18
RBM47-204	ENST00000505220	SLC22A4	Q9H015	551 aa		13.91	□□□□□ -0.18
RBM47-204	ENST00000505220	RIMS3	Q9UJD0	308 aa		13.91	□□□□□ -0.18
RBM47-204	ENST00000505220	AURKC	Q9UQB9	309 aa		13.91	□□□□□ -0.18
RBM47-204	ENST00000505220	SH3GLB1	Q9Y371	365 aa		13.91	□□□□□ -0.18
RBM47-204	ENST00000505220	MAB21L2	Q9Y586	359 aa		13.91	□□□□□ -0.18
RBM47-204	ENST00000505220	DNAH9	Q9NYC9	4486 aa		13.91	□□□□□ -0.18
RBM47-204	ENST00000505220	RER1	O15258	196 aa		13.9	□□□□□ -0.18
RBM47-204	ENST00000505220	POLR3G	O15318	223 aa	Predicted RBP	13.9	□□□□□ -0.18
RBM47-204	ENST00000505220	LSM6	P62312	80 aa	Known RBP	13.9	□□□□□ -0.18
RBM47-204	ENST00000505220	PRB3	Q04118	309 aa	Predicted RBP	13.9	□□□□□ -0.18
RBM47-204	ENST00000505220	MALL	Q13021	153 aa		13.9	□□□□□ -0.18
RBM47-204	ENST00000505220	LY6E	Q16553	131 aa		13.9	□□□□□ -0.18
RBM47-204	ENST00000505220	PGBD2	Q6P3X8	592 aa		13.9	□□□□□ -0.18
RBM47-204	ENST00000505220	MAVS	Q7Z434	540 aa		13.9	□□□□□ -0.18
RBM47-204	ENST00000505220	ANKRD42	Q8N9B4	389 aa		13.9	□□□□□ -0.18
RBM47-204	ENST00000505220	PLPP7	Q8NBV4	271 aa		13.9	□□□□□ -0.18
RBM47-204	ENST00000505220	TAMM41	Q96BW9	452 aa		13.9	□□□□□ -0.18
RBM47-204	ENST00000505220	BPIFA2	Q96DR5	249 aa		13.9	□□□□□ -0.18
RBM47-204	ENST00000505220	COQ7	Q99807	217 aa		13.9	□□□□□ -0.18
RBM47-204	ENST00000505220	NPFFR1	Q9GZQ6	430 aa		13.9	□□□□□ -0.18
RBM47-204	ENST00000505220	GRHPR	Q9UBQ7	328 aa		13.9	□□□□□ -0.18
RBM47-204	ENST00000505220	TEX13C	A0A0J9YWL9	993 aa		13.89	□□□□□ -0.19
RBM47-204	ENST00000505220	hCG_1807616	A0A1W2PRN6	198 aa		13.89	□□□□□ -0.19
RBM47-204	ENST00000505220	HTR3E	A5X5Y0	456 aa		13.89	□□□□□ -0.19
RBM47-204	ENST00000505220	IFI30	P13284	250 aa		13.89	□□□□□ -0.19
RBM47-204	ENST00000505220	IGLL1	P15814	213 aa		13.89	□□□□□ -0.19
RBM47-204	ENST00000505220	MRPL19	P49406	292 aa	Known RBP	13.89	□□□□□ -0.19
RBM47-204	ENST00000505220	PRSS12	P56730	875 aa		13.89	□□□□□ -0.19
RBM47-204	ENST00000505220	PIN1	Q13526	163 aa	Predicted RBP	13.89	□□□□□ -0.19
RBM47-204	ENST00000505220	MPP2	Q14168	576 aa		13.89	□□□□□ -0.19
RBM47-204	ENST00000505220	FAM90A1	Q86YD7	464 aa		13.89	□□□□□ -0.19
RBM47-204	ENST00000505220	FUNDC1	Q8IVP5	155 aa		13.89	□□□□□ -0.19
RBM47-204	ENST00000505220	BEND2	Q8NDZ0	799 aa		13.89	□□□□□ -0.19
RBM47-204	ENST00000505220	OR51G2	Q8NGK0	314 aa		13.89	□□□□□ -0.19
RBM47-204	ENST00000505220	OR51A7	Q8NH64	312 aa		13.89	□□□□□ -0.19
RBM47-204	ENST00000505220	DMRTB1	Q96MA1	342 aa		13.89	□□□□□ -0.19
RBM47-204	ENST00000505220	SSX3	Q99909	188 aa		13.89	□□□□□ -0.19
RBM47-204	ENST00000505220	ADAT1	Q9BUB4	502 aa	Known RBP	13.89	□□□□□ -0.19
RBM47-204	ENST00000505220	HDHD2	Q9H0R4	259 aa		13.89	□□□□□ -0.19
RBM47-204	ENST00000505220	RERGL	Q9H628	205 aa		13.89	□□□□□ -0.19
RBM47-204	ENST00000505220	C1orf123	Q9NWV4	160 aa		13.89	□□□□□ -0.19
RBM47-204	ENST00000505220	KAAG1	Q9UBP8	84 aa		13.89	□□□□□ -0.19
RBM47-204	ENST00000505220	TRAV27	A0A087WT01	109 aa		13.88	□□□□□ -0.19
RBM47-204	ENST00000505220		A6NLC8	198 aa		13.88	□□□□□ -0.19
RBM47-204	ENST00000505220	AHCYL1	O43865	530 aa		13.88	□□□□□ -0.19
RBM47-204	ENST00000505220	CD28	P10747	220 aa		13.88	□□□□□ -0.19
RBM47-204	ENST00000505220	CA6	P23280	308 aa		13.88	□□□□□ -0.19
RBM47-204	ENST00000505220	RPL4	P36578	427 aa	Known RBP	13.88	□□□□□ -0.19
RBM47-204	ENST00000505220	ACSM1	Q08AH1	577 aa		13.88	□□□□□ -0.19
RBM47-204	ENST00000505220	ECH1	Q13011	328 aa		13.88	□□□□□ -0.19
RBM47-204	ENST00000505220	KLRD1	Q13241	179 aa		13.88	□□□□□ -0.19
RBM47-204	ENST00000505220	GK2	Q14410	553 aa	Predicted RBP	13.88	□□□□□ -0.19
RBM47-204	ENST00000505220	OTP	Q5XKR4	325 aa		13.88	□□□□□ -0.19
RBM47-204	ENST00000505220	PGAP1	Q75T13	922 aa		13.88	□□□□□ -0.19
RBM47-204	ENST00000505220	GLB1L2	Q8IW92	636 aa		13.88	□□□□□ -0.19
RBM47-204	ENST00000505220	MICU2	Q8IYU8	434 aa		13.88	□□□□□ -0.19
RBM47-204	ENST00000505220	LRRC75A	Q8NAA5	344 aa		13.88	□□□□□ -0.19
RBM47-204	ENST00000505220	LY6G5B	Q8NDX9	201 aa		13.88	□□□□□ -0.19
RBM47-204	ENST00000505220	GJC3	Q8NFK1	279 aa		13.88	□□□□□ -0.19
RBM47-204	ENST00000505220	SLC7A13	Q8TCU3	470 aa		13.88	□□□□□ -0.19
RBM47-204	ENST00000505220	GMDS	O60547	372 aa		13.87	□□□□□ -0.19
RBM47-204	ENST00000505220	PEX14	O75381	377 aa		13.87	□□□□□ -0.19
RBM47-204	ENST00000505220	KHDRBS3	O75525	346 aa	Known RBP	13.87	□□□□□ -0.19
RBM47-204	ENST00000505220	CTLA4	P16410	223 aa		13.87	□□□□□ -0.19
RBM47-204	ENST00000505220	IFNA8	P32881	189 aa		13.87	□□□□□ -0.19
RBM47-204	ENST00000505220	UBE2E1	P51965	193 aa		13.87	□□□□□ -0.19
RBM47-204	ENST00000505220	MTPN	P58546	118 aa		13.87	□□□□□ -0.19
RBM47-204	ENST00000505220	POU4F2	Q12837	409 aa		13.87	□□□□□ -0.19
RBM47-204	ENST00000505220	ANKDD1A	Q495B1	522 aa		13.87	□□□□□ -0.19
RBM47-204	ENST00000505220	NCR3LG1	Q68D85	454 aa		13.87	□□□□□ -0.19
RBM47-204	ENST00000505220	MRPL21	Q7Z2W9	205 aa	Known RBP	13.87	□□□□□ -0.19
RBM47-204	ENST00000505220	OAF	Q86UD1	273 aa		13.87	□□□□□ -0.19
RBM47-204	ENST00000505220	PNKD	Q8N490	385 aa		13.87	□□□□□ -0.19
RBM47-204	ENST00000505220	SLCO4A1	Q96BD0	722 aa		13.87	□□□□□ -0.19
RBM47-204	ENST00000505220	NKX3-1	Q99801	234 aa	Predicted RBP	13.87	□□□□□ -0.19
RBM47-204	ENST00000505220	NDEL1	Q9GZM8	345 aa		13.87	□□□□□ -0.19
RBM47-204	ENST00000505220	BAG5	Q9UL15	447 aa		13.87	□□□□□ -0.19
RBM47-204	ENST00000505220	IGHV3OR15-7	A0A075B7D8	119 aa		13.86	□□□□□ -0.19
RBM47-204	ENST00000505220	PRSS37	A4D1T9	235 aa		13.86	□□□□□ -0.19
RBM47-204	ENST00000505220		E9PQ18	207 aa		13.86	□□□□□ -0.19

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