RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 CR1P17927 2039 aa7.1□□□□□ -1.27
CDC42SE2-208ENST00000505065 LALBAP00709 142 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 APOC1P02654 83 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 GATA4P43694 442 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 HCCSP53701 268 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 SGCAQ16586 387 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 LINC00346Q8IVM7 164 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 OR51L1Q8NGJ5 315 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 SGCDQ92629 289 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 PLEKHA8Q96JA3 519 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 GSX2Q9BZM3 304 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 FRRS1LQ9P0K9 344 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 SNX5Q9Y5X3 404 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 ARFGEF3Q5TH69 2177 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 TRBV5-7A0A0A0MS05 114 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 IQCMA0A1B0GVH7 501 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 CIB4A0PJX0 185 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 KRT33AO76009 404 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 MT-ND2P03891 347 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 OR52H1Q8NGJ2 320 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 SGK3Q96BR1 496 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 DBHP09172 617 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 ZNF823P16415 610 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 IGFBP3P17936 291 aaPredicted RBP7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 FAM3AP98173 230 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 TPBGQ13641 420 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 GLYATL3Q5SZD4 288 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 C9orf135Q5VTT2 229 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 OR14K1Q8NGZ2 314 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 FGF23Q9GZV9 251 aaPredicted RBP7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 OR51V1Q9H2C8 321 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 KCNN2Q9H2S1 579 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 ISG20L2Q9H9L3 353 aaKnown RBP7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 ELOVL3Q9HB03 270 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 SLC22A13Q9Y226 551 aa7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 SIRT4Q9Y6E7 314 aaPredicted RBP7.09□□□□□ -1.27
CDC42SE2-208ENST00000505065 M0R135 149 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 XRCC2O43543 280 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 SPARCP09486 303 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 CPEP16870 476 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 APOBEC3AP31941 199 aaPredicted RBP7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 THBS4P35443 961 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 IL5RAQ01344 420 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 FAM209AQ5JX71 171 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 KCTD18Q6PI47 426 aaPredicted RBP7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 OR8B12Q8NGG6 310 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 OR51G2Q8NGK0 314 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 ZNF799Q96GE5 643 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 FOXN4Q96NZ1 517 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 MED18Q9BUE0 208 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 SP140LQ9H930 580 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 TRIM64BA6NI03 449 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 TNFRSF13BO14836 293 aaPredicted RBP7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 CD3EP07766 207 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 COX6B1P14854 86 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 RAD52P43351 418 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 CX3CR1P49238 355 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 ZNF83P51522 516 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 ST3GAL4Q11206 333 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 FOXD4Q12950 439 aaPredicted RBP7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 ZNF181Q2M3W8 571 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 ZNF773Q6PK81 442 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 Q6ZR03 302 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 NAA40Q86UY6 237 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 OR6N2Q8NGY6 317 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 Q8TCH9 128 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 SMAP2Q8WU79 429 aaPredicted RBP7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 SLC30A2Q9BRI3 323 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 ALG8Q9BVK2 526 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 CA10Q9NS85 328 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 MRPL15Q9P015 296 aaKnown RBP7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 LAMP5Q9UJQ1 280 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 USP9YO00507 2555 aaPredicted RBP7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 SVILO95425 2214 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 VWC2LB2RUY7 222 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 FSTP19883 344 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 SYT6Q5T7P8 510 aaPredicted RBP7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 PLEKHG7Q6ZR37 379 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 UTS2BQ765I0 119 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 KLBQ86Z14 1044 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 SPARTQ8N0X7 666 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 OR6K6Q8NGW6 343 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 SPTSSAQ969W0 71 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 CLEC2DQ9UHP7 191 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 ATP6V1G2-DDX39BF2Z307 99 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 ABCD4O14678 606 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 XPNPEP2O43895 674 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 NGFP01138 241 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 HOXC12P31275 282 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 TTKP33981 857 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 CFHR2P36980 270 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 RPS27P42677 84 aaKnown RBP7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 GK2Q14410 553 aaPredicted RBP7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 CDK5R1Q15078 307 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 Q8NFD4 153 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 OR2AJ1Q8NGZ0 328 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 OR2G2Q8NGZ5 317 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 KLF14Q8TD94 323 aaPredicted RBP7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 MUL1Q969V5 352 aa7.08□□□□□ -1.28
CDC42SE2-208ENST00000505065 MARVELD3Q96A59 401 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms