RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 NMT2O60551 498 aa1.94□□□□□ -2.1
SUB1-204ENST00000504016 EIF1BO60739 113 aaKnown RBP1.94□□□□□ -2.1
SUB1-204ENST00000504016 CNMDO75829 334 aa1.94□□□□□ -2.1
SUB1-204ENST00000504016 OR1E1P30953 314 aa1.94□□□□□ -2.1
SUB1-204ENST00000504016 TALDO1P37837 337 aa1.94□□□□□ -2.1
SUB1-204ENST00000504016 EIF1P41567 113 aaKnown RBP1.94□□□□□ -2.1
SUB1-204ENST00000504016 TNNT2P45379 298 aaPredicted RBP1.94□□□□□ -2.1
SUB1-204ENST00000504016 GFERP55789 205 aa1.94□□□□□ -2.1
SUB1-204ENST00000504016 CCNA1P78396 465 aa1.94□□□□□ -2.1
SUB1-204ENST00000504016 PRR3P79522 188 aaKnown RBP1.94□□□□□ -2.1
SUB1-204ENST00000504016 SEMG2Q02383 582 aa1.94□□□□□ -2.1
SUB1-204ENST00000504016 KIR2DS1Q14954 304 aa1.94□□□□□ -2.1
SUB1-204ENST00000504016 TRAM2Q15035 370 aa1.94□□□□□ -2.1
SUB1-204ENST00000504016 SPIN3Q5JUX0 258 aa1.94□□□□□ -2.1
SUB1-204ENST00000504016 MBOAT2Q6ZWT7 520 aa1.94□□□□□ -2.1
SUB1-204ENST00000504016 CTAGE6Q86UF2 777 aa1.94□□□□□ -2.1
SUB1-204ENST00000504016 ST20-AS1Q8NBB2 130 aa1.94□□□□□ -2.1
SUB1-204ENST00000504016 TMEM104Q8NE00 496 aa1.94□□□□□ -2.1
SUB1-204ENST00000504016 OR5T1Q8NG75 326 aa1.94□□□□□ -2.1
SUB1-204ENST00000504016 WDR34Q96EX3 536 aa1.94□□□□□ -2.1
SUB1-204ENST00000504016 DYNLL2Q96FJ2 89 aa1.94□□□□□ -2.1
SUB1-204ENST00000504016 RNF145Q96MT1 663 aa1.94□□□□□ -2.1
SUB1-204ENST00000504016 TMEM243Q9BU79 118 aa1.94□□□□□ -2.1
SUB1-204ENST00000504016 EXOSC4Q9NPD3 245 aaKnown RBP1.94□□□□□ -2.1
SUB1-204ENST00000504016 ZNF229Q9UJW7 825 aa1.94□□□□□ -2.1
SUB1-204ENST00000504016 DENND4AQ7Z401 1863 aa1.94□□□□□ -2.1
SUB1-204ENST00000504016 IGHV1-69DA0A0B4J2H0 117 aa1.93□□□□□ -2.1
SUB1-204ENST00000504016 XKRY2A2RUG3 117 aa1.93□□□□□ -2.1
SUB1-204ENST00000504016 SERPINB7O75635 380 aa1.93□□□□□ -2.1
SUB1-204ENST00000504016 GLSO94925 669 aaPredicted RBP1.93□□□□□ -2.1
SUB1-204ENST00000504016 CYB5R3P00387 301 aaPredicted RBP1.93□□□□□ -2.1
SUB1-204ENST00000504016 FTH1P02794 183 aa1.93□□□□□ -2.1
SUB1-204ENST00000504016 SFTPCP11686 197 aa1.93□□□□□ -2.1
SUB1-204ENST00000504016 EIF2S2P20042 333 aaKnown RBP1.93□□□□□ -2.1
SUB1-204ENST00000504016 BCKDHBP21953 392 aa1.93□□□□□ -2.1
SUB1-204ENST00000504016 GTF2E2P29084 291 aaKnown RBP1.93□□□□□ -2.1
SUB1-204ENST00000504016 PBLDP30039 288 aaPredicted RBP1.93□□□□□ -2.1
SUB1-204ENST00000504016 RRM2P31350 389 aa1.93□□□□□ -2.1
SUB1-204ENST00000504016 PRLHRP49683 370 aa1.93□□□□□ -2.1
SUB1-204ENST00000504016 NDUFA8P51970 172 aa1.93□□□□□ -2.1
SUB1-204ENST00000504016 BAMBIQ13145 260 aa1.93□□□□□ -2.1
SUB1-204ENST00000504016 ART3Q13508 389 aa1.93□□□□□ -2.1
SUB1-204ENST00000504016 YIF1BQ5BJH7 314 aa1.93□□□□□ -2.1
SUB1-204ENST00000504016 GTPBP8Q8N3Z3 284 aaPredicted RBP1.93□□□□□ -2.1
SUB1-204ENST00000504016 OR1J4Q8NGS1 313 aa1.93□□□□□ -2.1
SUB1-204ENST00000504016 GHSRQ92847 366 aa1.93□□□□□ -2.1
SUB1-204ENST00000504016 RHOXF2Q9BQY4 288 aa1.93□□□□□ -2.1
SUB1-204ENST00000504016 CCDC77Q9BR77 488 aa1.93□□□□□ -2.1
SUB1-204ENST00000504016 MARVELD1Q9BSK0 173 aa1.93□□□□□ -2.1
SUB1-204ENST00000504016 SHANK2-AS3Q9BTD1 123 aa1.93□□□□□ -2.1
SUB1-204ENST00000504016 C20orf24Q9BUV8 137 aa1.93□□□□□ -2.1
SUB1-204ENST00000504016 SLIRPQ9GZT3 109 aaKnown RBP1.93□□□□□ -2.1
SUB1-204ENST00000504016 LHX5Q9H2C1 402 aa1.93□□□□□ -2.1
SUB1-204ENST00000504016 MED4Q9NPJ6 270 aa1.93□□□□□ -2.1
SUB1-204ENST00000504016 SLC17A7Q9P2U7 560 aa1.93□□□□□ -2.1
SUB1-204ENST00000504016 RABL2AQ9UBK7 228 aaPredicted RBP1.93□□□□□ -2.1
SUB1-204ENST00000504016 SLC17A4Q9Y2C5 497 aa1.93□□□□□ -2.1
SUB1-204ENST00000504016 PCDH11XQ9BZA7 1347 aa1.92□□□□□ -2.1
SUB1-204ENST00000504016 SYNRGQ9UMZ2 1314 aa1.92□□□□□ -2.1
SUB1-204ENST00000504016 IGHV3-49A0A0A0MS15 119 aa1.92□□□□□ -2.1
SUB1-204ENST00000504016 IGHV7-4-1A0A0J9YVY3 117 aa1.92□□□□□ -2.1
SUB1-204ENST00000504016 VGLL3A8MV65 326 aa1.92□□□□□ -2.1
SUB1-204ENST00000504016 H0YC42 278 aa1.92□□□□□ -2.1
SUB1-204ENST00000504016 CASQ2O14958 399 aaPredicted RBP1.92□□□□□ -2.1
SUB1-204ENST00000504016 POLR2IP36954 125 aaKnown RBP1.92□□□□□ -2.1
SUB1-204ENST00000504016 RAB9AP51151 201 aa1.92□□□□□ -2.1
SUB1-204ENST00000504016 WDR43Q15061 677 aaKnown RBP eCLIP1.92□□□□□ -2.1
SUB1-204ENST00000504016 TEX30Q5JUR7 227 aa1.92□□□□□ -2.1
SUB1-204ENST00000504016 TPTE2P1Q5T6R2 138 aa1.92□□□□□ -2.1
SUB1-204ENST00000504016 C1orf185Q5T7R7 199 aa1.92□□□□□ -2.1
SUB1-204ENST00000504016 ZNF547Q8IVP9 402 aa1.92□□□□□ -2.1
SUB1-204ENST00000504016 CDH26Q8IXH8 852 aa1.92□□□□□ -2.1
SUB1-204ENST00000504016 ZNF101Q8IZC7 436 aa1.92□□□□□ -2.1
SUB1-204ENST00000504016 OR5M1Q8NGP8 315 aa1.92□□□□□ -2.1
SUB1-204ENST00000504016 OR6Q1Q8NGQ2 317 aa1.92□□□□□ -2.1
SUB1-204ENST00000504016 PRRC1Q96M27 445 aa1.92□□□□□ -2.1
SUB1-204ENST00000504016 ANGPTL4Q9BY76 406 aa1.92□□□□□ -2.1
SUB1-204ENST00000504016 ANKRD60Q9BZ19 345 aa1.92□□□□□ -2.1
SUB1-204ENST00000504016 RHBDL2Q9NX52 303 aa1.92□□□□□ -2.1
SUB1-204ENST00000504016 DHX57Q6P158 1386 aaKnown RBP1.91□□□□□ -2.1
SUB1-204ENST00000504016 IGHV3-72A0A0B4J1Y9 119 aa1.91□□□□□ -2.1
SUB1-204ENST00000504016 CEACAM18A8MTB9 384 aa1.91□□□□□ -2.1
SUB1-204ENST00000504016 TEX46H3BTG2 121 aa1.91□□□□□ -2.1
SUB1-204ENST00000504016 GABRPO00591 440 aa1.91□□□□□ -2.1
SUB1-204ENST00000504016 SCAMP2O15127 329 aaKnown RBP1.91□□□□□ -2.1
SUB1-204ENST00000504016 PAHP00439 452 aa1.91□□□□□ -2.1
SUB1-204ENST00000504016 AGTP01019 485 aa1.91□□□□□ -2.1
SUB1-204ENST00000504016 IGHV3-11P01762 117 aa1.91□□□□□ -2.1
SUB1-204ENST00000504016 CT45A6P0DMU7 189 aa1.91□□□□□ -2.1
SUB1-204ENST00000504016 CT45A5P0DMU8 189 aa1.91□□□□□ -2.1
SUB1-204ENST00000504016 CT45A7P0DMV0 189 aa1.91□□□□□ -2.1
SUB1-204ENST00000504016 MYL2P10916 166 aa1.91□□□□□ -2.1
SUB1-204ENST00000504016 TCP1P17987 556 aaKnown RBP1.91□□□□□ -2.1
SUB1-204ENST00000504016 BMI1P35226 326 aa1.91□□□□□ -2.1
SUB1-204ENST00000504016 CMC4P56277 68 aaPredicted RBP1.91□□□□□ -2.1
SUB1-204ENST00000504016 RAB10P61026 200 aa1.91□□□□□ -2.1
SUB1-204ENST00000504016 TMED1Q13445 227 aa1.91□□□□□ -2.1
SUB1-204ENST00000504016 CUL2Q13617 745 aa1.91□□□□□ -2.1
SUB1-204ENST00000504016 IDI1Q13907 227 aa1.91□□□□□ -2.1
SUB1-204ENST00000504016 CT45A1Q5HYN5 189 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms