RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 SHISA2Q6UWI4 295 aa8.99□□□□□ -0.97
SNCA-207ENST00000502987 LRRN1Q6UXK5 716 aa8.99□□□□□ -0.97
SNCA-207ENST00000502987 DOK3Q7L591 496 aa8.99□□□□□ -0.97
SNCA-207ENST00000502987 NLRC3Q7RTR2 1065 aa8.99□□□□□ -0.97
SNCA-207ENST00000502987 TSEN54Q7Z6J9 526 aaKnown RBP8.99□□□□□ -0.97
SNCA-207ENST00000502987 KLBQ86Z14 1044 aa8.99□□□□□ -0.97
SNCA-207ENST00000502987 PARP8Q8N3A8 854 aa8.99□□□□□ -0.97
SNCA-207ENST00000502987 BOLLQ8N9W6 283 aaKnown RBP8.99□□□□□ -0.97
SNCA-207ENST00000502987 OR8B3Q8NGG8 313 aa8.99□□□□□ -0.97
SNCA-207ENST00000502987 OR11L1Q8NGX0 322 aa8.99□□□□□ -0.97
SNCA-207ENST00000502987 SPRYD4Q8WW59 207 aaPredicted RBP8.99□□□□□ -0.97
SNCA-207ENST00000502987 RAB40AQ8WXH6 277 aa8.99□□□□□ -0.97
SNCA-207ENST00000502987 SLCO4A1Q96BD0 722 aa8.99□□□□□ -0.97
SNCA-207ENST00000502987 PYURFQ96I23 114 aa8.99□□□□□ -0.97
SNCA-207ENST00000502987 C7orf34Q96L11 122 aa8.99□□□□□ -0.97
SNCA-207ENST00000502987 OR8B2Q96RD0 313 aa8.99□□□□□ -0.97
SNCA-207ENST00000502987 ELAC2Q9BQ52 826 aaKnown RBP8.99□□□□□ -0.97
SNCA-207ENST00000502987 SLC30A2Q9BRI3 323 aa8.99□□□□□ -0.97
SNCA-207ENST00000502987 TMEM246Q9BRR3 403 aa8.99□□□□□ -0.97
SNCA-207ENST00000502987 OR52D1Q9H346 318 aa8.99□□□□□ -0.97
SNCA-207ENST00000502987 ZMAT3Q9HA38 289 aaKnown RBP8.99□□□□□ -0.97
SNCA-207ENST00000502987 SPAG4Q9NPE6 437 aa8.99□□□□□ -0.97
SNCA-207ENST00000502987 UFSP2Q9NUQ7 469 aa8.99□□□□□ -0.97
SNCA-207ENST00000502987 DCAF13Q9NV06 445 aaKnown RBP8.99□□□□□ -0.97
SNCA-207ENST00000502987 A8MXK9 166 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 MLNRO43193 412 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 TXNDC12O95881 172 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 IGHV4-38-2P0DP08 117 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 HIST1H1CP16403 213 aaKnown RBP8.98□□□□□ -0.97
SNCA-207ENST00000502987 ZNF823P16415 610 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 IFNGR2P38484 337 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 PITPNBP48739 271 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 TPTEP56180 551 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 FXYD6P3P58550 94 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 HIST1H3AP68431 136 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 PAX8Q06710 450 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 DBPQ10586 325 aaPredicted RBP8.98□□□□□ -0.97
SNCA-207ENST00000502987 COX10Q12887 443 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 ECH1Q13011 328 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 OR8G1Q15617 311 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 FAM201AQ5SY85 155 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 SLC35F1Q5T1Q4 408 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 HIST2H3PS2Q5TEC6 136 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 HIST2H3AQ71DI3 136 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 PGAP1Q75T13 922 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 MRPL21Q7Z2W9 205 aaKnown RBP8.98□□□□□ -0.97
SNCA-207ENST00000502987 NAA40Q86UY6 237 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 OR6V1Q8N148 313 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 FAM86B1Q8N7N1 296 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 C19orf18Q8NEA5 215 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 SDR9C7Q8NEX9 313 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 ZNF48Q96MX3 618 aaPredicted RBP8.98□□□□□ -0.97
SNCA-207ENST00000502987 ATF6BQ99941 703 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 ZNF747Q9BV97 191 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 FAM107BQ9H098 131 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 FN3KQ9H479 309 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 TNFRSF19Q9NS68 423 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 ABCD2Q9UBJ2 740 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 CLN8Q9UBY8 286 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 N6AMT1Q9Y5N5 214 aa8.98□□□□□ -0.97
SNCA-207ENST00000502987 IGLV1-36A0A0B4J1U3 117 aa8.97□□□□□ -0.97
SNCA-207ENST00000502987 TRAV40A0A0B4J280 105 aa8.97□□□□□ -0.97
SNCA-207ENST00000502987 IGHV2-70DA0A0C4DH43 119 aa8.97□□□□□ -0.97
SNCA-207ENST00000502987 ACSM4P0C7M7 580 aa8.97□□□□□ -0.97
SNCA-207ENST00000502987 CPT2P23786 658 aa8.97□□□□□ -0.97
SNCA-207ENST00000502987 MSX2P35548 267 aaPredicted RBP8.97□□□□□ -0.97
SNCA-207ENST00000502987 GGT2P36268 569 aa8.97□□□□□ -0.97
SNCA-207ENST00000502987 TRAP1Q12931 704 aaKnown RBP8.97□□□□□ -0.97
SNCA-207ENST00000502987 GK2Q14410 553 aaPredicted RBP8.97□□□□□ -0.97
SNCA-207ENST00000502987 TAF13Q15543 124 aa8.97□□□□□ -0.97
SNCA-207ENST00000502987 SLC18B1Q6NT16 456 aa8.97□□□□□ -0.97
SNCA-207ENST00000502987 CFAP77Q6ZQR2 320 aa8.97□□□□□ -0.97
SNCA-207ENST00000502987 SLC26A10Q8NG04 563 aa8.97□□□□□ -0.97
SNCA-207ENST00000502987 GNPDA2Q8TDQ7 276 aa8.97□□□□□ -0.97
SNCA-207ENST00000502987 SPTSSAQ969W0 71 aa8.97□□□□□ -0.97
SNCA-207ENST00000502987 TECTBQ96PL2 329 aa8.97□□□□□ -0.97
SNCA-207ENST00000502987 NUDT16L1Q9BRJ7 211 aaKnown RBP8.97□□□□□ -0.97
SNCA-207ENST00000502987 MMADHCQ9H3L0 296 aaPredicted RBP8.97□□□□□ -0.97
SNCA-207ENST00000502987 UNKLQ9H9P5 680 aaKnown RBP8.97□□□□□ -0.97
SNCA-207ENST00000502987 ZNF446Q9NWS9 450 aa8.97□□□□□ -0.97
SNCA-207ENST00000502987 SOX21Q9Y651 276 aaPredicted RBP8.97□□□□□ -0.97
SNCA-207ENST00000502987 MEGF8Q7Z7M0 2845 aa8.96□□□□□ -0.97
SNCA-207ENST00000502987 OR6C68A6NDL8 312 aa8.96□□□□□ -0.98
SNCA-207ENST00000502987 GGT3PA6NGU5 568 aa8.96□□□□□ -0.98
SNCA-207ENST00000502987 ARPC3O15145 178 aa8.96□□□□□ -0.98
SNCA-207ENST00000502987 TMPRSS2O15393 492 aa8.96□□□□□ -0.98
SNCA-207ENST00000502987 IDH3BO43837 385 aa8.96□□□□□ -0.98
SNCA-207ENST00000502987 FAM20BO75063 409 aa8.96□□□□□ -0.98
SNCA-207ENST00000502987 FABP3P05413 133 aa8.96□□□□□ -0.98
SNCA-207ENST00000502987 CRYBA1P05813 215 aa8.96□□□□□ -0.98
SNCA-207ENST00000502987 RNASE1P07998 156 aaKnown RBP8.96□□□□□ -0.98
SNCA-207ENST00000502987 CA6P23280 308 aa8.96□□□□□ -0.98
SNCA-207ENST00000502987 RRM2P31350 389 aa8.96□□□□□ -0.98
SNCA-207ENST00000502987 PYCR1P32322 319 aa8.96□□□□□ -0.98
SNCA-207ENST00000502987 PMELP40967 661 aa8.96□□□□□ -0.98
SNCA-207ENST00000502987 IL13RA1P78552 427 aa8.96□□□□□ -0.98
SNCA-207ENST00000502987 MXRA7P84157 204 aa8.96□□□□□ -0.98
SNCA-207ENST00000502987 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.96□□□□□ -0.98
SNCA-207ENST00000502987 SLC9A3R2Q15599 337 aa8.96□□□□□ -0.98
SNCA-207ENST00000502987 ZNF181Q2M3W8 571 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms