RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 MEGF9Q9H1U4 602 aa4.63□□□□□ -1.67
SPTA1-209ENST00000498708 DENND2DQ9H6A0 471 aaPredicted RBP4.63□□□□□ -1.67
SPTA1-209ENST00000498708 SCPEP1Q9HB40 452 aa4.63□□□□□ -1.67
SPTA1-209ENST00000498708 NKIRAS2Q9NYR9 191 aa4.63□□□□□ -1.67
SPTA1-209ENST00000498708 NKIRAS1Q9NYS0 192 aa4.63□□□□□ -1.67
SPTA1-209ENST00000498708 EIF3KQ9UBQ5 218 aaKnown RBP4.63□□□□□ -1.67
SPTA1-209ENST00000498708 NUP50Q9UKX7 468 aa4.63□□□□□ -1.67
SPTA1-209ENST00000498708 NPTNQ9Y639 398 aa4.63□□□□□ -1.67
SPTA1-209ENST00000498708 AUP1Q9Y679 476 aa4.63□□□□□ -1.67
SPTA1-209ENST00000498708 USH1CQ9Y6N9 552 aa4.63□□□□□ -1.67
SPTA1-209ENST00000498708 STAB2Q8WWQ8 2551 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 LOC100509620A0A075B734 347 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 LCE6AA0A183 80 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 A0A1W2PPL8 197 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 A0A1W2PRG6 482 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 TRAPPC13A5PLN9 417 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 C3orf84H3BNL1 204 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 HOXA3O43365 443 aaPredicted RBP4.62□□□□□ -1.67
SPTA1-209ENST00000498708 TIMM8AO60220 97 aaPredicted RBP4.62□□□□□ -1.67
SPTA1-209ENST00000498708 MGRN1O60291 552 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 PIP5K1CO60331 668 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 FOXH1O75593 365 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 CLPXO76031 633 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 SNAP29O95721 258 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 IGHV4-38-2P0DP08 117 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 ACADSP16219 412 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 FAHP16930 419 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 M6PRP20645 277 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 PPIBP23284 216 aaKnown RBP4.62□□□□□ -1.67
SPTA1-209ENST00000498708 LAP3P28838 519 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 SOX6P35712 828 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 ATP4BP51164 291 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 MMP15P51511 669 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 UGT2B15P54855 530 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 MAGOHP61326 146 aaKnown RBP4.62□□□□□ -1.67
SPTA1-209ENST00000498708 TNFAIP6P98066 277 aaPredicted RBP4.62□□□□□ -1.67
SPTA1-209ENST00000498708 PSG4Q00888 419 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 RPL18Q07020 188 aaKnown RBP4.62□□□□□ -1.67
SPTA1-209ENST00000498708 CD47Q08722 323 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 ZNF154Q13106 437 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 CYLC2Q14093 348 aaPredicted RBP4.62□□□□□ -1.67
SPTA1-209ENST00000498708 CYP51A1Q16850 503 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 C2orf68Q2NKX9 166 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 TNFAIP8L3Q5GJ75 292 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 ZNF362Q5T0B9 420 aaPredicted RBP4.62□□□□□ -1.67
SPTA1-209ENST00000498708 ZNF774Q6NX45 483 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 C1orf94Q6P1W5 598 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 WDR93Q6P2C0 686 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 ZNF613Q6PF04 617 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 C11orf88Q6PI97 169 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 C1orf122Q6ZSJ8 110 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 ZER1Q7Z7L7 766 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 DHDDSQ86SQ9 333 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 SLC51BQ86UW2 128 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 IGFN1Q86VF2 1251 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 PTOV1Q86YD1 416 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 MICU2Q8IYU8 434 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 OR5AS1Q8N127 324 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 CLDN22Q8N7P3 220 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 DEFB108BQ8NET1 73 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 ZNF420Q8TAQ5 688 aaPredicted RBP4.62□□□□□ -1.67
SPTA1-209ENST00000498708 Q8TCH9 128 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 KLF14Q8TD94 323 aaPredicted RBP4.62□□□□□ -1.67
SPTA1-209ENST00000498708 BCAS4Q8TDM0 211 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 TMEM255BQ8WV15 326 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 ITLN1Q8WWA0 313 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 ASB10Q8WXI3 467 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 HDAC2Q92769 488 aaKnown RBP4.62□□□□□ -1.67
SPTA1-209ENST00000498708 MARS2Q96GW9 593 aaKnown RBP4.62□□□□□ -1.67
SPTA1-209ENST00000498708 POM121L2Q96KW2 1035 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 CPPED1Q9BRF8 314 aaPredicted RBP4.62□□□□□ -1.67
SPTA1-209ENST00000498708 MRI1Q9BV20 369 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 WNT5BQ9H1J7 359 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 C1orf198Q9H425 327 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 POFUT1Q9H488 388 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 TMEM38AQ9H6F2 299 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 SLCO1B3Q9NPD5 702 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 MEPEQ9NQ76 525 aaPredicted RBP4.62□□□□□ -1.67
SPTA1-209ENST00000498708 INIPQ9NRY2 104 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 PLEK2Q9NYT0 353 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 EXTL2Q9UBQ6 330 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 PURGQ9UJV8 347 aaKnown RBP4.62□□□□□ -1.67
SPTA1-209ENST00000498708 ZNF229Q9UJW7 825 aa4.62□□□□□ -1.67
SPTA1-209ENST00000498708 DOCK11Q5JSL3 2073 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 ALMS1Q8TCU4 4167 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 ABCA13Q86UQ4 5058 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 TRAV6A0A075B6T7 132 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 TRBV5-3A0A0A0MS03 114 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 H7C1C5 153 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 PSMD9O00233 223 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 PRODHO43272 600 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 ENTPD5O75356 428 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 OR7A10O76100 309 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 NDUFA7O95182 113 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 TGDSO95455 350 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 CYB5R3P00387 301 aaPredicted RBP4.61□□□□□ -1.67
SPTA1-209ENST00000498708 IGHV2-70P01814 119 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 SLPIP03973 132 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 ASAH2BP0C7U1 165 aa4.61□□□□□ -1.67
SPTA1-209ENST00000498708 ZNF12P17014 697 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms