RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 LIPFP07098 398 aa12.14□□□□□ -0.47
TRAF4-212ENST00000498540 SDHAP31040 664 aa12.14□□□□□ -0.47
TRAF4-212ENST00000498540 IFNA8P32881 189 aa12.14□□□□□ -0.47
TRAF4-212ENST00000498540 SELENOWP63302 87 aa12.14□□□□□ -0.47
TRAF4-212ENST00000498540 GK2Q14410 553 aaPredicted RBP12.14□□□□□ -0.47
TRAF4-212ENST00000498540 KCNMB1Q16558 191 aa12.14□□□□□ -0.47
TRAF4-212ENST00000498540 C2orf68Q2NKX9 166 aa12.14□□□□□ -0.47
TRAF4-212ENST00000498540 BEND6Q5SZJ8 279 aaPredicted RBP12.14□□□□□ -0.47
TRAF4-212ENST00000498540 AGBL2Q5U5Z8 902 aa12.14□□□□□ -0.47
TRAF4-212ENST00000498540 ZNF730Q6ZMV8 503 aa12.14□□□□□ -0.47
TRAF4-212ENST00000498540 COLCA1Q6ZS62 124 aa12.14□□□□□ -0.47
TRAF4-212ENST00000498540 PTCHD4Q6ZW05 846 aa12.14□□□□□ -0.47
TRAF4-212ENST00000498540 MBOAT2Q6ZWT7 520 aa12.14□□□□□ -0.47
TRAF4-212ENST00000498540 PIP4P2Q8N4L2 257 aa12.14□□□□□ -0.47
TRAF4-212ENST00000498540 PNLDC1Q8NA58 520 aaKnown RBP12.14□□□□□ -0.47
TRAF4-212ENST00000498540 SCCPDHQ8NBX0 429 aa12.14□□□□□ -0.47
TRAF4-212ENST00000498540 ERGIC1Q969X5 290 aa12.14□□□□□ -0.47
TRAF4-212ENST00000498540 NUAK2Q9H093 628 aa12.14□□□□□ -0.47
TRAF4-212ENST00000498540 RASSF4Q9H2L5 321 aa12.14□□□□□ -0.47
TRAF4-212ENST00000498540 VSX1Q9NZR4 365 aaPredicted RBP12.14□□□□□ -0.47
TRAF4-212ENST00000498540 RPS6KA6Q9UK32 745 aa12.14□□□□□ -0.47
TRAF4-212ENST00000498540 FAM220BPB1ANY3 271 aa12.13□□□□□ -0.47
TRAF4-212ENST00000498540 G3V4G9 280 aa12.13□□□□□ -0.47
TRAF4-212ENST00000498540 LGALS8O00214 317 aa12.13□□□□□ -0.47
TRAF4-212ENST00000498540 DCTN6O00399 190 aa12.13□□□□□ -0.47
TRAF4-212ENST00000498540 SOCS2O14508 198 aa12.13□□□□□ -0.47
TRAF4-212ENST00000498540 IFNW1P05000 195 aa12.13□□□□□ -0.47
TRAF4-212ENST00000498540 ACSM4P0C7M7 580 aa12.13□□□□□ -0.47
TRAF4-212ENST00000498540 ARF6P62330 175 aa12.13□□□□□ -0.47
TRAF4-212ENST00000498540 DBPQ10586 325 aaPredicted RBP12.13□□□□□ -0.47
TRAF4-212ENST00000498540 BEAN1Q3B7T3 259 aa12.13□□□□□ -0.47
TRAF4-212ENST00000498540 KRTAP27-1Q3LI81 207 aa12.13□□□□□ -0.47
TRAF4-212ENST00000498540 TMPRSS11FQ6ZWK6 438 aa12.13□□□□□ -0.47
TRAF4-212ENST00000498540 RNF113BQ8IZP6 322 aaKnown RBP12.13□□□□□ -0.47
TRAF4-212ENST00000498540 GJC3Q8NFK1 279 aa12.13□□□□□ -0.47
TRAF4-212ENST00000498540 DYDC1Q8WWB3 177 aa12.13□□□□□ -0.47
TRAF4-212ENST00000498540 TSSK2Q96PF2 358 aa12.13□□□□□ -0.47
TRAF4-212ENST00000498540 SEMA6AQ9H2E6 1030 aa12.13□□□□□ -0.47
TRAF4-212ENST00000498540 C16orf95Q9H693 158 aa12.13□□□□□ -0.47
TRAF4-212ENST00000498540 RNF7Q9UBF6 113 aa12.13□□□□□ -0.47
TRAF4-212ENST00000498540 C5orf63A6NC05 138 aa12.12□□□□□ -0.47
TRAF4-212ENST00000498540 MRASO14807 208 aa12.12□□□□□ -0.47
TRAF4-212ENST00000498540 OR10H3O60404 316 aa12.12□□□□□ -0.47
TRAF4-212ENST00000498540 ALX3O95076 343 aa12.12□□□□□ -0.47
TRAF4-212ENST00000498540 PRB2P02812 416 aaPredicted RBP12.12□□□□□ -0.47
TRAF4-212ENST00000498540 CSF1P09603 554 aa12.12□□□□□ -0.47
TRAF4-212ENST00000498540 CA6P23280 308 aa12.12□□□□□ -0.47
TRAF4-212ENST00000498540 CENPAP49450 140 aa12.12□□□□□ -0.47
TRAF4-212ENST00000498540 COX10Q12887 443 aa12.12□□□□□ -0.47
TRAF4-212ENST00000498540 OR8G1Q15617 311 aa12.12□□□□□ -0.47
TRAF4-212ENST00000498540 OR8B8Q15620 311 aa12.12□□□□□ -0.47
TRAF4-212ENST00000498540 KCNJ8Q15842 424 aa12.12□□□□□ -0.47
TRAF4-212ENST00000498540 DHRS7BQ6IAN0 325 aaPredicted RBP12.12□□□□□ -0.47
TRAF4-212ENST00000498540 GDPGP1Q6ZNW5 385 aa12.12□□□□□ -0.47
TRAF4-212ENST00000498540 CFAP77Q6ZQR2 320 aa12.12□□□□□ -0.47
TRAF4-212ENST00000498540 NAA40Q86UY6 237 aa12.12□□□□□ -0.47
TRAF4-212ENST00000498540 OR2T12Q8NG77 320 aa12.12□□□□□ -0.47
TRAF4-212ENST00000498540 SLCO4A1Q96BD0 722 aa12.12□□□□□ -0.47
TRAF4-212ENST00000498540 FAM46AQ96IP4 442 aaKnown RBP12.12□□□□□ -0.47
TRAF4-212ENST00000498540 GPX7Q96SL4 187 aaPredicted RBP12.12□□□□□ -0.47
TRAF4-212ENST00000498540 FN3KRPQ9HA64 309 aa12.12□□□□□ -0.47
TRAF4-212ENST00000498540 NRIP3Q9NQ35 241 aa12.12□□□□□ -0.47
TRAF4-212ENST00000498540 GMPR2Q9P2T1 348 aaKnown RBP12.12□□□□□ -0.47
TRAF4-212ENST00000498540 SIGLEC7Q9Y286 467 aa12.12□□□□□ -0.47
TRAF4-212ENST00000498540 PLXNB1O43157 2135 aa12.11□□□□□ -0.47
TRAF4-212ENST00000498540 A0A0G2JND7 137 aa12.11□□□□□ -0.47
TRAF4-212ENST00000498540 OOEPA6NGQ2 149 aa12.11□□□□□ -0.47
TRAF4-212ENST00000498540 F5H5K5 113 aa12.11□□□□□ -0.47
TRAF4-212ENST00000498540 PTP4A3O75365 173 aa12.11□□□□□ -0.47
TRAF4-212ENST00000498540 NDUFB2O95178 105 aa12.11□□□□□ -0.47
TRAF4-212ENST00000498540 GYPAP02724 150 aa12.11□□□□□ -0.47
TRAF4-212ENST00000498540 CDKN2AP42771 156 aaKnown RBP12.11□□□□□ -0.47
TRAF4-212ENST00000498540 FXYD6P3P58550 94 aa12.11□□□□□ -0.47
TRAF4-212ENST00000498540 EGR3Q06889 387 aa12.11□□□□□ -0.47
TRAF4-212ENST00000498540 GPR139Q6DWJ6 353 aa12.11□□□□□ -0.47
TRAF4-212ENST00000498540 Q6ZPA2 131 aa12.11□□□□□ -0.47
TRAF4-212ENST00000498540 BTN2A1Q7KYR7 527 aa12.11□□□□□ -0.47
TRAF4-212ENST00000498540 VMO1Q7Z5L0 202 aa12.11□□□□□ -0.47
TRAF4-212ENST00000498540 ADCK1Q86TW2 530 aa12.11□□□□□ -0.47
TRAF4-212ENST00000498540 FAM90A1Q86YD7 464 aa12.11□□□□□ -0.47
TRAF4-212ENST00000498540 LINC00346Q8IVM7 164 aa12.11□□□□□ -0.47
TRAF4-212ENST00000498540 FGFRL1Q8N441 504 aa12.11□□□□□ -0.47
TRAF4-212ENST00000498540 LRTOMTQ8WZ04 291 aa12.11□□□□□ -0.47
TRAF4-212ENST00000498540 LZICQ8WZA0 190 aa12.11□□□□□ -0.47
TRAF4-212ENST00000498540 ADAT1Q9BUB4 502 aaKnown RBP12.11□□□□□ -0.47
TRAF4-212ENST00000498540 NDEL1Q9GZM8 345 aa12.11□□□□□ -0.47
TRAF4-212ENST00000498540 DPAGT1Q9H3H5 408 aa12.11□□□□□ -0.47
TRAF4-212ENST00000498540 IER3IP1Q9Y5U9 82 aa12.11□□□□□ -0.47
TRAF4-212ENST00000498540 NBEAL2Q6ZNJ1 2754 aa12.11□□□□□ -0.47
TRAF4-212ENST00000498540 IGLV1-36A0A0B4J1U3 117 aa12.1□□□□□ -0.47
TRAF4-212ENST00000498540 TRAV38-1A0A0B4J264 116 aa12.1□□□□□ -0.47
TRAF4-212ENST00000498540 ZNF816-ZNF321PA0A0X1KG74 233 aa12.1□□□□□ -0.47
TRAF4-212ENST00000498540 DVL1O14640 695 aa12.1□□□□□ -0.47
TRAF4-212ENST00000498540 TSPAN9O75954 239 aa12.1□□□□□ -0.47
TRAF4-212ENST00000498540 PTBP3O95758 552 aaKnown RBP12.1□□□□□ -0.47
TRAF4-212ENST00000498540 LCATP04180 440 aa12.1□□□□□ -0.47
TRAF4-212ENST00000498540 ANOS1P23352 680 aa12.1□□□□□ -0.47
TRAF4-212ENST00000498540 PRB3Q04118 309 aaPredicted RBP12.1□□□□□ -0.47
TRAF4-212ENST00000498540 POU4F2Q12837 409 aa12.1□□□□□ -0.47
TRAF4-212ENST00000498540 COQ5Q5HYK3 327 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms