RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 CDC40O60508 579 aaKnown RBP eCLIP1.31□□□□□ -2.2
RBM39-242ENST00000498280 FCN3O75636 299 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 SEMA3DO95025 777 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 FGFR1OPO95684 399 aaKnown RBP1.31□□□□□ -2.2
RBM39-242ENST00000498280 CCNE2O96020 404 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 HLA-DQA1P01909 254 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 IFNW1P05000 195 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 TPM2P07951 284 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 FGF4P08620 206 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 C1GALT1C1LP0DN25 315 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 ANXA8P13928 327 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 USF1P22415 310 aaPredicted RBP1.31□□□□□ -2.2
RBM39-242ENST00000498280 RBM34P42696 430 aaKnown RBP1.31□□□□□ -2.2
RBM39-242ENST00000498280 RPS5P46782 204 aaKnown RBP1.31□□□□□ -2.2
RBM39-242ENST00000498280 ATP5OP48047 213 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 CXCL12P48061 93 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 SERPINB8P50452 374 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 CCNG1P51959 295 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 NDUFA8P51970 172 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 GFERP55789 205 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 RPS15AP62244 130 aaKnown RBP1.31□□□□□ -2.2
RBM39-242ENST00000498280 RPL23P62829 140 aaKnown RBP1.31□□□□□ -2.2
RBM39-242ENST00000498280 CACNG7P62955 275 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 CRADDP78560 199 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 PITPNAQ00169 270 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 IFT88Q13099 833 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 ART3Q13508 389 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 KIR2DS1Q14954 304 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 TRMT5Q32P41 509 aaKnown RBP1.31□□□□□ -2.2
RBM39-242ENST00000498280 CHRFAM7AQ494W8 412 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 MPV17L2Q567V2 206 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 GCSAMLQ5JQS6 135 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 ANXA8L1Q5VT79 327 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 ZFP1Q6P2D0 407 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 CLEC2AQ6UVW9 174 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 HMGN2P46Q86SG4 172 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 JAGN1Q8N5M9 183 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 RNF182Q8N6D2 247 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 BPIFCQ8NFQ6 507 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 OR6Q1Q8NGQ2 317 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 OR52P1PQ8NH57 321 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 LINC01560Q8TB33 94 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 DEDD2Q8WXF8 326 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 RPEQ96AT9 228 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 DCPSQ96C86 337 aaKnown RBP1.31□□□□□ -2.2
RBM39-242ENST00000498280 LINC00477Q96M19 166 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 FOXC2Q99958 501 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 UQCC2Q9BRT2 126 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 ZNF2Q9BSG1 426 aaPredicted RBP1.31□□□□□ -2.2
RBM39-242ENST00000498280 GGTLC1Q9BX51 225 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 SLIRPQ9GZT3 109 aaKnown RBP1.31□□□□□ -2.2
RBM39-242ENST00000498280 ING2Q9H160 280 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 ELOVL6Q9H5J4 265 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 AUNIPQ9H7T9 357 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 TMEM27Q9HBJ8 222 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 MRM3Q9HC36 420 aaKnown RBP1.31□□□□□ -2.2
RBM39-242ENST00000498280 FBXO6Q9NRD1 293 aaPredicted RBP1.31□□□□□ -2.2
RBM39-242ENST00000498280 CLN6Q9NWW5 311 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 SLC39A1Q9NY26 324 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 AHSPQ9NZD4 102 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 PDP1Q9P0J1 537 aaPredicted RBP1.31□□□□□ -2.2
RBM39-242ENST00000498280 SLC17A7Q9P2U7 560 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 PHLPP2Q6ZVD8 1323 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 PCDH11XQ9BZA7 1347 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 PTPRTO14522 1441 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 YEATS2Q9ULM3 1422 aa1.31□□□□□ -2.2
RBM39-242ENST00000498280 NUP214P35658 2090 aaPredicted RBP1.3□□□□□ -2.2
RBM39-242ENST00000498280 DOCK9Q9BZ29 2069 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 KCNE1BA0A087WTH5 132 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 TRAV40A0A0B4J280 105 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 IGHV1-69DA0A0B4J2H0 117 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 TSPAN11A1L157 253 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 SYCE1LA8MT33 242 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 KRBOX1C9JBD0 128 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 RPL36A-HNRNPH2H7BZ11 118 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 H7C0C1 242 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 K7EM74 188 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 M0R3G1 203 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 BCKDKO14874 412 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 CTAG2O75638 210 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 RBBP9O75884 186 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 SLC22A5O76082 557 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 RCBTB2O95199 551 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 HPRT1P00492 218 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 HLA-HP01893 362 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 HLA-DQB1P01920 261 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 PGA5P0DJD9 388 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 ZNF14P17017 642 aaPredicted RBP1.3□□□□□ -2.2
RBM39-242ENST00000498280 TCP1P17987 556 aaKnown RBP1.3□□□□□ -2.2
RBM39-242ENST00000498280 RAB4AP20338 218 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 LOXP28300 417 aaPredicted RBP1.3□□□□□ -2.2
RBM39-242ENST00000498280 BMI1P35226 326 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 RFC3P40938 356 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 ZNF121P58317 390 aaPredicted RBP1.3□□□□□ -2.2
RBM39-242ENST00000498280 TAS2R31P59538 309 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 TAS2R46P59540 309 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 CYP24A1Q07973 514 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 ZNF816Q0VGE8 651 aaPredicted RBP1.3□□□□□ -2.2
RBM39-242ENST00000498280 IL18Q14116 193 aa1.3□□□□□ -2.2
RBM39-242ENST00000498280 NCF4Q15080 339 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms