RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 BIKQ13323 160 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 ALG10Q5BKT4 473 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 DMRTC1Q5HYR2 192 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 CLEC18BQ6UXF7 455 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 OR2I1PQ8NGU4 316 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 DEFB118Q96PH6 123 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 SPACA5Q96QH8 159 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 B9D1Q9UPM9 204 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 SDCBPO00560 298 aaPredicted RBP11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 ABLIM3O94929 683 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 COX5BP10606 129 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 SSBP1Q04837 148 aaKnown RBP11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 RASGEF1BQ0VAM2 473 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 RHEBQ15382 184 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 ZNF684Q5T5D7 378 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 ULK3Q6PHR2 472 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 COX15Q7KZN9 410 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 OR13C3Q8NGS6 347 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 PMM1Q92871 262 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 NMES1Q9C002 83 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 A0A087WZY1 265 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 ATXN7O15265 892 aaPredicted RBP11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 LMX1BO60663 402 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 FKTNO75072 461 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 ABHD16AO95870 558 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 PNPP00491 289 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 AK1P00568 194 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 IL2RAP01589 272 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 MBP02144 154 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 MELTFP08582 738 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 RPL12P30050 165 aaKnown RBP11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 PCP4P48539 62 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 PNLIPRP3Q17RR3 467 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 ZNF595Q8IYB9 648 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 KREMEN2Q8NCW0 462 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 CDC6Q99741 560 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 PARP11Q9NR21 331 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 RTTNQ86VV8 2226 aa11.72□□□□□ -0.53
GAPVD1-220ENST00000497580 TGIF2-C20orf24A0A0A6YYL0 155 aa11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 FAM157AC9JC47 383 aa11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 KLK2P20151 261 aa11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 ASCL1P50553 236 aa11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 SRSF5Q13243 272 aaKnown RBP11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 FAM213BQ8TBF2 198 aa11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 MCHR2Q969V1 340 aa11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 SLCO5A1Q9H2Y9 848 aa11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 C8orf33Q9H7E9 229 aaPredicted RBP11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 SEC14L6B5MCN3 397 aa11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 JMJD7P0C870 316 aa11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 CRABP1P29762 137 aa11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 MFGE8Q08431 387 aaPredicted RBP11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 RPUSD3Q6P087 351 aaKnown RBP11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 TMEM184AQ6ZMB5 413 aa11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 ZNF574Q6ZN55 896 aaPredicted RBP11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 NRSN1Q8IZ57 195 aa11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 ZNF101Q8IZC7 436 aa11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 ZDHHC22Q8N966 263 aa11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 CDRT4Q8N9R6 151 aa11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 OR4D6Q8NGJ1 314 aa11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 OR52E1Q8NGJ3 308 aa11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 RNF128Q8TEB7 428 aa11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 MOGAT1Q96PD6 335 aa11.71□□□□□ -0.53
GAPVD1-220ENST00000497580 SMCO3A2RU48 225 aa11.71□□□□□ -0.54
GAPVD1-220ENST00000497580 CT62P0C5K7 136 aa11.71□□□□□ -0.54
GAPVD1-220ENST00000497580 CHATP28329 748 aa11.71□□□□□ -0.54
GAPVD1-220ENST00000497580 TMEM33P57088 247 aa11.71□□□□□ -0.54
GAPVD1-220ENST00000497580 UBE2KP61086 200 aa11.71□□□□□ -0.54
GAPVD1-220ENST00000497580 MLF2Q15773 248 aaPredicted RBP11.71□□□□□ -0.54
GAPVD1-220ENST00000497580 IAH1Q2TAA2 248 aaPredicted RBP11.71□□□□□ -0.54
GAPVD1-220ENST00000497580 ANKRD55Q3KP44 614 aa11.71□□□□□ -0.54
GAPVD1-220ENST00000497580 RCBTB1Q8NDN9 531 aa11.71□□□□□ -0.54
GAPVD1-220ENST00000497580 ARRDC3Q96B67 414 aa11.71□□□□□ -0.54
GAPVD1-220ENST00000497580 RARRES2Q99969 163 aa11.71□□□□□ -0.54
GAPVD1-220ENST00000497580 MESP1Q9BRJ9 268 aa11.71□□□□□ -0.54
GAPVD1-220ENST00000497580 MYOZ1Q9NP98 299 aaPredicted RBP11.71□□□□□ -0.54
GAPVD1-220ENST00000497580 SPHK2Q9NRA0 654 aa11.71□□□□□ -0.54
GAPVD1-220ENST00000497580 OR5H15A6NDH6 313 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 OR5H1A6NKK0 313 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 CSTAP01040 98 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 CXCL1P09341 107 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 VIPR2P41587 438 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 ACAA2P42765 397 aaKnown RBP11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 ZIC1Q15915 447 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 ASPHD2Q6ICH7 369 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 TCEAL6Q6IPX3 200 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 HEPN1Q6WQI6 88 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 C19orf47Q8N9M1 422 aaKnown RBP11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 OR2L3Q8NG85 312 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 LMLNQ96KR4 655 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 PACRGQ96M98 296 aaPredicted RBP11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 FAM212BQ9NTI7 297 aaPredicted RBP11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 GPR34Q9UPC5 381 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 FLVCR1Q9Y5Y0 555 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 MTCL1Q9Y4B5 1905 aaKnown RBP11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 FGF17O60258 216 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 HIST1H2BKO60814 126 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 TMEM127O75204 238 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 HIST1H2BJP06899 126 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 PET100P0DJ07 73 aa11.7□□□□□ -0.54
GAPVD1-220ENST00000497580 HLA-GP17693 338 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms