RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 ISG15P05161 165 aa17.05■□□□□ 0.32
SCAMP3-209ENST00000497470 ATP6V1B1P15313 513 aa17.05■□□□□ 0.32
SCAMP3-209ENST00000497470 ZNF19P17023 458 aa17.05■□□□□ 0.32
SCAMP3-209ENST00000497470 PCMT1P22061 227 aa17.05■□□□□ 0.32
SCAMP3-209ENST00000497470 EMX1Q04741 257 aaPredicted RBP17.05■□□□□ 0.32
SCAMP3-209ENST00000497470 TP53I3Q53FA7 332 aa17.05■□□□□ 0.32
SCAMP3-209ENST00000497470 ZNF367Q7RTV3 350 aa17.05■□□□□ 0.32
SCAMP3-209ENST00000497470 CATSPERDQ86XM0 798 aa17.05■□□□□ 0.32
SCAMP3-209ENST00000497470 ELMOD2Q8IZ81 293 aa17.05■□□□□ 0.32
SCAMP3-209ENST00000497470 SPRYD4Q8WW59 207 aaPredicted RBP17.05■□□□□ 0.32
SCAMP3-209ENST00000497470 SGCDQ92629 289 aa17.05■□□□□ 0.32
SCAMP3-209ENST00000497470 RNF166Q96A37 237 aaPredicted RBP17.05■□□□□ 0.32
SCAMP3-209ENST00000497470 C14orf79Q96F83 325 aa17.05■□□□□ 0.32
SCAMP3-209ENST00000497470 C1QTNF6Q9BXI9 259 aa17.05■□□□□ 0.32
SCAMP3-209ENST00000497470 FBXO9Q9UK97 447 aaPredicted RBP17.05■□□□□ 0.32
SCAMP3-209ENST00000497470 RNF115Q9Y4L5 304 aa17.05■□□□□ 0.32
SCAMP3-209ENST00000497470 PRR14LQ5THK1 2151 aa17.05■□□□□ 0.32
SCAMP3-209ENST00000497470 LOC390937A0A1W2PQ73 354 aa17.04■□□□□ 0.32
SCAMP3-209ENST00000497470 A6NNC1 897 aa17.04■□□□□ 0.32
SCAMP3-209ENST00000497470 SMPD2O60906 423 aa17.04■□□□□ 0.32
SCAMP3-209ENST00000497470 IGLV3-1P01715 115 aa17.04■□□□□ 0.32
SCAMP3-209ENST00000497470 DBHP09172 617 aa17.04■□□□□ 0.32
SCAMP3-209ENST00000497470 CALCRP30988 508 aa17.04■□□□□ 0.32
SCAMP3-209ENST00000497470 WNT5AP41221 380 aa17.04■□□□□ 0.32
SCAMP3-209ENST00000497470 PRKXP51817 358 aa17.04■□□□□ 0.32
SCAMP3-209ENST00000497470 ZNF121P58317 390 aaPredicted RBP17.04■□□□□ 0.32
SCAMP3-209ENST00000497470 MLLT11Q13015 90 aaPredicted RBP17.04■□□□□ 0.32
SCAMP3-209ENST00000497470 FBXW12Q6X9E4 464 aa17.04■□□□□ 0.32
SCAMP3-209ENST00000497470 ZNF704Q6ZNC4 412 aaPredicted RBP17.04■□□□□ 0.32
SCAMP3-209ENST00000497470 KRT74Q7RTS7 529 aa17.04■□□□□ 0.32
SCAMP3-209ENST00000497470 OR2G2Q8NGZ5 317 aa17.04■□□□□ 0.32
SCAMP3-209ENST00000497470 CCDC90BQ9GZT6 254 aa17.04■□□□□ 0.32
SCAMP3-209ENST00000497470 OR10A2Q9H208 303 aa17.04■□□□□ 0.32
SCAMP3-209ENST00000497470 ISG20L2Q9H9L3 353 aaKnown RBP17.04■□□□□ 0.32
SCAMP3-209ENST00000497470 VCX3AQ9NNX9 186 aa17.04■□□□□ 0.32
SCAMP3-209ENST00000497470 G6PC2Q9NQR9 355 aa17.04■□□□□ 0.32
SCAMP3-209ENST00000497470 ACOXLQ9NUZ1 547 aa17.04■□□□□ 0.32
SCAMP3-209ENST00000497470 GRIP1Q9Y3R0 1128 aa17.04■□□□□ 0.32
SCAMP3-209ENST00000497470 RTTNQ86VV8 2226 aa17.04■□□□□ 0.32
SCAMP3-209ENST00000497470 DHRS7CA6NNS2 312 aa17.03■□□□□ 0.32
SCAMP3-209ENST00000497470 ABCD4O14678 606 aa17.03■□□□□ 0.32
SCAMP3-209ENST00000497470 SIAH2O43255 324 aa17.03■□□□□ 0.32
SCAMP3-209ENST00000497470 PLPP2O43688 288 aa17.03■□□□□ 0.32
SCAMP3-209ENST00000497470 GPRIN2O60269 458 aa17.03■□□□□ 0.32
SCAMP3-209ENST00000497470 COX6B1P14854 86 aa17.03■□□□□ 0.32
SCAMP3-209ENST00000497470 JUNBP17275 347 aaPredicted RBP17.03■□□□□ 0.32
SCAMP3-209ENST00000497470 SLC6A9P48067 706 aa17.03■□□□□ 0.32
SCAMP3-209ENST00000497470 EVX1P49640 407 aa17.03■□□□□ 0.32
SCAMP3-209ENST00000497470 HGFACQ04756 655 aa17.03■□□□□ 0.32
SCAMP3-209ENST00000497470 MALLQ13021 153 aa17.03■□□□□ 0.32
SCAMP3-209ENST00000497470 ALKBH1Q13686 389 aaKnown RBP17.03■□□□□ 0.32
SCAMP3-209ENST00000497470 OR2G6Q5TZ20 316 aa17.03■□□□□ 0.32
SCAMP3-209ENST00000497470 PAQR4Q8N4S7 273 aaPredicted RBP17.03■□□□□ 0.32
SCAMP3-209ENST00000497470 SLC7A6Q92536 515 aa17.03■□□□□ 0.32
SCAMP3-209ENST00000497470 OR52A1Q9UKL2 312 aa17.03■□□□□ 0.32
SCAMP3-209ENST00000497470 TMEM212A6NML5 194 aa17.02■□□□□ 0.32
SCAMP3-209ENST00000497470 SHISA9B4DS77 424 aa17.02■□□□□ 0.32
SCAMP3-209ENST00000497470 PNPP00491 289 aa17.02■□□□□ 0.32
SCAMP3-209ENST00000497470 LCATP04180 440 aa17.02■□□□□ 0.32
SCAMP3-209ENST00000497470 UBCP0CG48 685 aaKnown RBP17.02■□□□□ 0.32
SCAMP3-209ENST00000497470 RAC2P15153 192 aa17.02■□□□□ 0.32
SCAMP3-209ENST00000497470 ZNF12P17014 697 aa17.02■□□□□ 0.32
SCAMP3-209ENST00000497470 CCL1P22362 96 aa17.02■□□□□ 0.32
SCAMP3-209ENST00000497470 DDOSTP39656 456 aa17.02■□□□□ 0.32
SCAMP3-209ENST00000497470 TPBGQ13641 420 aa17.02■□□□□ 0.32
SCAMP3-209ENST00000497470 CDK5R1Q15078 307 aa17.02■□□□□ 0.32
SCAMP3-209ENST00000497470 SYT6Q5T7P8 510 aaPredicted RBP17.02■□□□□ 0.32
SCAMP3-209ENST00000497470 TMEM244Q5VVB8 128 aa17.02■□□□□ 0.32
SCAMP3-209ENST00000497470 MBNL2Q5VZF2 373 aaKnown RBP17.02■□□□□ 0.32
SCAMP3-209ENST00000497470 DMKNQ6E0U4 476 aaPredicted RBP17.02■□□□□ 0.32
SCAMP3-209ENST00000497470 SPATC1Q76KD6 591 aa17.02■□□□□ 0.32
SCAMP3-209ENST00000497470 ZNF101Q8IZC7 436 aa17.02■□□□□ 0.32
SCAMP3-209ENST00000497470 PLPP7Q8NBV4 271 aa17.02■□□□□ 0.32
SCAMP3-209ENST00000497470 AKAP1Q92667 903 aaKnown RBP eCLIP17.02■□□□□ 0.32
SCAMP3-209ENST00000497470 PBOV1Q9GZY1 135 aa17.02■□□□□ 0.32
SCAMP3-209ENST00000497470 OR4C45A6NMZ5 311 aa17.01■□□□□ 0.31
SCAMP3-209ENST00000497470 PSMD9O00233 223 aa17.01■□□□□ 0.31
SCAMP3-209ENST00000497470 ANXA2P07355 339 aaKnown RBP17.01■□□□□ 0.31
SCAMP3-209ENST00000497470 ZNF250P15622 560 aa17.01■□□□□ 0.31
SCAMP3-209ENST00000497470 SELEP16581 610 aa17.01■□□□□ 0.31
SCAMP3-209ENST00000497470 CCNOP22674 350 aa17.01■□□□□ 0.31
SCAMP3-209ENST00000497470 PPP1CBP62140 327 aa17.01■□□□□ 0.31
SCAMP3-209ENST00000497470 MOGQ16653 247 aa17.01■□□□□ 0.31
SCAMP3-209ENST00000497470 ZNF718Q3SXZ3 478 aa17.01■□□□□ 0.31
SCAMP3-209ENST00000497470 SLC22A25Q6T423 547 aa17.01■□□□□ 0.31
SCAMP3-209ENST00000497470 GATAD2BQ8WXI9 593 aa17.01■□□□□ 0.31
SCAMP3-209ENST00000497470 THRSPQ92748 146 aa17.01■□□□□ 0.31
SCAMP3-209ENST00000497470 C10orf35Q96D05 121 aa17.01■□□□□ 0.31
SCAMP3-209ENST00000497470 SMIM19Q96E16 107 aa17.01■□□□□ 0.31
SCAMP3-209ENST00000497470 MARS2Q96GW9 593 aaKnown RBP17.01■□□□□ 0.31
SCAMP3-209ENST00000497470 MGLLQ99685 303 aa17.01■□□□□ 0.31
SCAMP3-209ENST00000497470 REPIN1Q9BWE0 567 aaKnown RBP17.01■□□□□ 0.31
SCAMP3-209ENST00000497470 HEATR1Q9H583 2144 aaKnown RBP17.01■□□□□ 0.31
SCAMP3-209ENST00000497470 FRRS1LQ9P0K9 344 aa17.01■□□□□ 0.31
SCAMP3-209ENST00000497470 CGGBP1Q9UFW8 167 aaPredicted RBP17.01■□□□□ 0.31
SCAMP3-209ENST00000497470 ST6GALNAC2Q9UJ37 374 aa17.01■□□□□ 0.31
SCAMP3-209ENST00000497470 CADP27708 2225 aa17■□□□□ 0.31
SCAMP3-209ENST00000497470 MAGEB4O15481 346 aaPredicted RBP17■□□□□ 0.31
SCAMP3-209ENST00000497470 TTRP02766 147 aa17■□□□□ 0.31
SCAMP3-209ENST00000497470 CCL2P13500 99 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms