RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 USF1P22415 310 aaPredicted RBP2.47□□□□□ -2.01
SMC4-225ENST00000497203 MYL9P24844 172 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 PFN2P35080 140 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 PEX19P40855 299 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 FABP6P51161 128 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 RPS15AP62244 130 aaKnown RBP2.47□□□□□ -2.01
SMC4-225ENST00000497203 SYCNQ0VAF6 134 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 DGCR6Q14129 220 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 TFDP2Q14188 446 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 ZNF266Q14584 549 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 STK11Q15831 433 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 SMUG1Q53HV7 270 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 FBXW9Q5XUX1 488 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 H3F3CQ6NXT2 135 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 BHLHA15Q7RTS1 189 aaPredicted RBP2.47□□□□□ -2.01
SMC4-225ENST00000497203 UNC93AQ86WB7 457 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 RIMKLAQ8IXN7 391 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 UBALD2Q8IYN6 164 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 CMTM8Q8IZV2 173 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 LRRC75AQ8NAA5 344 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 C11orf72Q8NBR9 251 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 PROKR2Q8NFJ6 384 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 OR10G6Q8NH81 332 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 ITFG1Q8TB96 612 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 SYNPRQ8TBG9 265 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 CA5BP1Q8WTZ4 195 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 PTX4Q96A99 478 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 NARS2Q96I59 477 aaKnown RBP2.47□□□□□ -2.01
SMC4-225ENST00000497203 DEFB129Q9H1M3 183 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 C8orf33Q9H7E9 229 aaPredicted RBP2.47□□□□□ -2.01
SMC4-225ENST00000497203 ZNF430Q9H8G1 570 aaPredicted RBP2.47□□□□□ -2.01
SMC4-225ENST00000497203 CD209Q9NNX6 404 aa2.47□□□□□ -2.01
SMC4-225ENST00000497203 YTHDF2Q9Y5A9 579 aaKnown RBP2.47□□□□□ -2.01
SMC4-225ENST00000497203 PCM1Q15154 2024 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 ARID1AO14497 2285 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 IGKV2-28A0A075B6P5 120 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 TRAV6A0A075B6T7 132 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 IGHV1OR15-9A0A0B4J2B8 117 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 A0A0U1RQV1 116 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 H7C1H1 209 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 DNASE2O00115 360 aaPredicted RBP2.46□□□□□ -2.02
SMC4-225ENST00000497203 GABRPO00591 440 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 BPY2O14599 106 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 NVLO15381 856 aaKnown RBP2.46□□□□□ -2.02
SMC4-225ENST00000497203 RBFOX2O43251 390 aaKnown RBP eCLIP2.46□□□□□ -2.02
SMC4-225ENST00000497203 SLC22A5O76082 557 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 IGKV2D-28P01615 120 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 GLAP06280 429 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 OR56A5P0C7T3 313 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 PRKACAP17612 351 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 NBL1P41271 181 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 SLC11A1P49279 550 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 RAB7AP51149 207 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 DAOAP59103 153 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 EIF4EBP2Q13542 120 aaPredicted RBP2.46□□□□□ -2.02
SMC4-225ENST00000497203 HADHQ16836 314 aaKnown RBP2.46□□□□□ -2.02
SMC4-225ENST00000497203 RPEL1Q2QD12 228 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 HIKESHIQ53FT3 197 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 ULK3Q6PHR2 472 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 Q6ZR03 302 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 NTM-AS1Q6ZSK4 140 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 FAM122BQ7Z309 247 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 NKAIN4Q8IVV8 208 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 CDKL3Q8IVW4 592 aaPredicted RBP2.46□□□□□ -2.02
SMC4-225ENST00000497203 H1FOOQ8IZA3 346 aaPredicted RBP2.46□□□□□ -2.02
SMC4-225ENST00000497203 UBAC2Q8NBM4 344 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 OR8U1Q8NH10 309 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 OR51F2Q8NH61 342 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 RAB1CQ92928 201 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 NAT6Q93015 286 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 APH1AQ96BI3 265 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 CERS2Q96G23 380 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 RNF145Q96MT1 663 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 ZNF317Q96PQ6 595 aaPredicted RBP2.46□□□□□ -2.02
SMC4-225ENST00000497203 TMEM27Q9HBJ8 222 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 DYRK4Q9NR20 520 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 DDX19BQ9UMR2 479 aa2.46□□□□□ -2.02
SMC4-225ENST00000497203 GPATCH8Q9UKJ3 1502 aaKnown RBP2.46□□□□□ -2.02
SMC4-225ENST00000497203 A0A0J9YXV3 536 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 ZNF705GA8MUZ8 300 aaPredicted RBP2.45□□□□□ -2.02
SMC4-225ENST00000497203 SERPINE3A8MV23 424 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 RSPH10B2B2RC85 870 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 ANKRD65E5RJM6 399 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 ERI3O43414 337 aaKnown RBP2.45□□□□□ -2.02
SMC4-225ENST00000497203 CHMP2AO43633 222 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 GCM2O75603 506 aaPredicted RBP2.45□□□□□ -2.02
SMC4-225ENST00000497203 REM1O75628 298 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 APCSP02743 223 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 MRPL3P09001 348 aaKnown RBP2.45□□□□□ -2.02
SMC4-225ENST00000497203 TACSTD2P09758 323 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 RHOXF2BP0C7M4 288 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 RSPH10BP0C881 870 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 C1GALT1C1LP0DN25 315 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 HTR1DP28221 377 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 TALDO1P37837 337 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 AP1S2P56377 157 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 KRTAP10-1P60331 282 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 YWHAEP62258 255 aaKnown RBP2.45□□□□□ -2.02
SMC4-225ENST00000497203 KDSRQ06136 332 aa2.45□□□□□ -2.02
SMC4-225ENST00000497203 C5orf47Q569G3 176 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms