RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 WNT2P09544 360 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 ZNF35P13682 527 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 UGT2B7P16662 529 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 CELP19835 753 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 CRHBPP24387 322 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 RPS12P25398 132 aaKnown RBP2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 HMGA2P52926 109 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 PLP1P60201 277 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 RHOAP61586 193 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 SRSF4Q08170 494 aaKnown RBP2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 CDH18Q13634 790 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 GPR18Q14330 331 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 IL13RA2Q14627 380 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 GNMTQ14749 295 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 JOSD1Q15040 202 aaPredicted RBP2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 UBE2SQ16763 222 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 TMEM241Q24JQ0 296 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 CEACAM21Q3KPI0 293 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 KRTAP15-1Q3LI76 137 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 UNC50Q53HI1 259 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 TPTE2P1Q5T6R2 138 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 NSUN5P2Q63ZY6 315 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 LAIR1Q6GTX8 287 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 CES5AQ6NT32 575 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 FAAP20Q6NZ36 180 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 CD200R1LQ6Q8B3 271 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 ENPP6Q6UWR7 440 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 Q6YL49 198 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 C5orf24Q7Z6I8 188 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 TMEM173Q86WV6 379 aaPredicted RBP2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 TMEM25Q86YD3 366 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 APOBEC3FQ8IUX4 373 aaKnown RBP2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 CBR4Q8N4T8 237 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 INO80EQ8NBZ0 244 aaPredicted RBP2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 SLC30A7Q8NEW0 376 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 SDR9C7Q8NEX9 313 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 OR7G2Q8NG99 324 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 LYPD6BQ8NI32 183 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 SLC7A13Q8TCU3 470 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 WIPF2Q8TF74 440 aaPredicted RBP2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 TMEM159Q96B96 161 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 ZBTB45Q96K62 511 aaPredicted RBP2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 SLC35G5Q96KT7 338 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 TEX37Q96LM6 180 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 JSRP1Q96MG2 331 aaPredicted RBP2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 CSF3RQ99062 836 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 TM6SF1Q9BZW5 370 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 EGLN3Q9H6Z9 239 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 BEX1Q9HBH7 125 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 C3orf14Q9HBI5 128 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 LRTM1Q9HBL6 345 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 ZBTB20Q9HC78 741 aaPredicted RBP2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 UBQLN4Q9NRR5 601 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 RNF181Q9P0P0 153 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 RIMS3Q9UJD0 308 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 ST3GAL6Q9Y274 331 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 RAP2CQ9Y3L5 183 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 PPIAL4AQ9Y536 164 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 PCYT1BQ9Y5K3 369 aaPredicted RBP2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 MROH2AA6NES4 1674 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 SNED1Q8TER0 1413 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 EHBP1L1Q8N3D4 1523 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 ARHGEF12Q9NZN5 1544 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 MYH9P35579 1960 aaKnown RBP2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 CAMSAP1Q5T5Y3 1602 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 A0A087WUJ7 227 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 IQCMA0A1B0GVH7 501 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 A0A1W2PPE3 182 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 C1orf226A1L170 272 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 ANKUB1A6NFN9 424 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 A8MVM7 634 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 OR1F1O43749 312 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 STK16O75716 305 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 MPC2O95563 127 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 GASTP01350 101 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 APODP05090 189 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 BCHEP06276 602 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 GIPP09681 153 aaPredicted RBP2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 HIST1H2AGP0C0S8 130 aaPredicted RBP2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 OR13C7P0DN81 318 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 SELEP16581 610 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 HIST1H2ADP20671 130 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 GJB2P29033 226 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 ADORA2BP29275 332 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 ACLYP53396 1101 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 PAX9P55771 341 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 NCS1P62166 190 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 C2orf80Q0P641 193 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 CEACAM7Q14002 265 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 OR1Q1Q15612 314 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 SRSF7Q16629 238 aaKnown RBP eCLIP2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 ZNF750Q32MQ0 723 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 GLYR1Q49A26 553 aaPredicted RBP2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 SYTL3Q4VX76 610 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 C19orf54Q5BKX5 351 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 TXNDC8Q6A555 127 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 HIST2H2AA3Q6FI13 130 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 RGMBQ6NW40 437 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 ENPP7Q6UWV6 458 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 WDR82Q6UXN9 313 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms