RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 CCNB2O95067 398 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 ZNF205O95201 554 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 HLA-DPB1P04440 258 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 MDH2P40926 338 aaKnown RBP11.98□□□□□ -0.49
VTI1A-209ENST00000496445 PMELP40967 661 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 SLC6A9P48067 706 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 MS4A2Q01362 244 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 ECH1Q13011 328 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 SLC27A4Q6P1M0 643 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 RASSF6Q6ZTQ3 369 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 MOGAT3Q86VF5 341 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 AQP11Q8NBQ7 271 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 SLC37A3Q8NCC5 494 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 PROKR2Q8NFJ6 384 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 OR51L1Q8NGJ5 315 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 OR9Q1Q8NGQ5 310 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 OR2AJ1Q8NGZ0 328 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 OR4Q3Q8NH05 313 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 CCT8L2Q96SF2 557 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 CDADC1Q9BWV3 514 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 MAGIXQ9H6Y5 334 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 ESM1Q9NQ30 184 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 DDX28Q9NUL7 540 aaKnown RBP11.98□□□□□ -0.49
VTI1A-209ENST00000496445 TBC1D23Q9NUY8 699 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 KCNG2Q9UJ96 466 aa11.98□□□□□ -0.49
VTI1A-209ENST00000496445 C5orf63A6NC05 138 aa11.97□□□□□ -0.49
VTI1A-209ENST00000496445 M0R135 149 aa11.97□□□□□ -0.49
VTI1A-209ENST00000496445 LCATP04180 440 aa11.97□□□□□ -0.49
VTI1A-209ENST00000496445 ZNF12P17014 697 aa11.97□□□□□ -0.49
VTI1A-209ENST00000496445 SRP9P49458 86 aaKnown RBP11.97□□□□□ -0.49
VTI1A-209ENST00000496445 MNAT1P51948 309 aa11.97□□□□□ -0.49
VTI1A-209ENST00000496445 ZNF154Q13106 437 aa11.97□□□□□ -0.49
VTI1A-209ENST00000496445 MAB21L1Q13394 359 aa11.97□□□□□ -0.49
VTI1A-209ENST00000496445 TUSC1Q2TAM9 212 aa11.97□□□□□ -0.49
VTI1A-209ENST00000496445 SNAI3Q3KNW1 292 aa11.97□□□□□ -0.49
VTI1A-209ENST00000496445 MUC20Q8N307 709 aaPredicted RBP11.97□□□□□ -0.49
VTI1A-209ENST00000496445 LNX2Q8N448 690 aa11.97□□□□□ -0.49
VTI1A-209ENST00000496445 LINC00471Q8N535 108 aa11.97□□□□□ -0.49
VTI1A-209ENST00000496445 NANPQ8TBE9 248 aa11.97□□□□□ -0.49
VTI1A-209ENST00000496445 C22orf15Q8WYQ4 148 aa11.97□□□□□ -0.49
VTI1A-209ENST00000496445 DVL3Q92997 716 aaPredicted RBP11.97□□□□□ -0.49
VTI1A-209ENST00000496445 ZNF799Q96GE5 643 aa11.97□□□□□ -0.49
VTI1A-209ENST00000496445 NSL1Q96IY1 281 aa11.97□□□□□ -0.49
VTI1A-209ENST00000496445 RBM4Q9BWF3 364 aaKnown RBP11.97□□□□□ -0.49
VTI1A-209ENST00000496445 MUC13Q9H3R2 512 aa11.97□□□□□ -0.49
VTI1A-209ENST00000496445 TMEM165Q9HC07 324 aa11.97□□□□□ -0.49
VTI1A-209ENST00000496445 ARMC1Q9NVT9 282 aa11.97□□□□□ -0.49
VTI1A-209ENST00000496445 COMMD3-BMI1R4GMX3 469 aa11.97□□□□□ -0.49
VTI1A-209ENST00000496445 DOCK11Q5JSL3 2073 aa11.96□□□□□ -0.49
VTI1A-209ENST00000496445 IFNL4K9M1U5 179 aa11.96□□□□□ -0.49
VTI1A-209ENST00000496445 SOX14O95416 240 aa11.96□□□□□ -0.49
VTI1A-209ENST00000496445 GYPBP06028 91 aa11.96□□□□□ -0.49
VTI1A-209ENST00000496445 T-ENOLP0DO92 83 aa11.96□□□□□ -0.49
VTI1A-209ENST00000496445 OTX1P32242 354 aaPredicted RBP11.96□□□□□ -0.49
VTI1A-209ENST00000496445 GATA4P43694 442 aa11.96□□□□□ -0.49
VTI1A-209ENST00000496445 RAD23AP54725 363 aa11.96□□□□□ -0.49
VTI1A-209ENST00000496445 HOXA4Q00056 320 aaPredicted RBP11.96□□□□□ -0.49
VTI1A-209ENST00000496445 CRMP1Q14194 572 aa11.96□□□□□ -0.49
VTI1A-209ENST00000496445 TRIM25Q14258 630 aaKnown RBP11.96□□□□□ -0.49
VTI1A-209ENST00000496445 ZNF181Q2M3W8 571 aa11.96□□□□□ -0.49
VTI1A-209ENST00000496445 KLF17Q5JT82 389 aaPredicted RBP11.96□□□□□ -0.49
VTI1A-209ENST00000496445 FAM201AQ5SY85 155 aa11.96□□□□□ -0.49
VTI1A-209ENST00000496445 DHFR2Q86XF0 187 aa11.96□□□□□ -0.49
VTI1A-209ENST00000496445 ARHGAP24Q8N264 748 aa11.96□□□□□ -0.49
VTI1A-209ENST00000496445 OR2T4Q8NH00 348 aa11.96□□□□□ -0.49
VTI1A-209ENST00000496445 SLCO4A1Q96BD0 722 aa11.96□□□□□ -0.49
VTI1A-209ENST00000496445 SUCNR1Q9BXA5 334 aa11.96□□□□□ -0.49
VTI1A-209ENST00000496445 TSSK6Q9BXA6 273 aa11.96□□□□□ -0.49
VTI1A-209ENST00000496445 HCAR1Q9BXC0 346 aa11.96□□□□□ -0.49
VTI1A-209ENST00000496445 DGCR6LQ9BY27 220 aa11.96□□□□□ -0.49
VTI1A-209ENST00000496445 NMNAT2Q9BZQ4 307 aa11.96□□□□□ -0.49
VTI1A-209ENST00000496445 TMEM100Q9NV29 134 aa11.96□□□□□ -0.49
VTI1A-209ENST00000496445 INSIG2Q9Y5U4 225 aa11.96□□□□□ -0.49
VTI1A-209ENST00000496445 U3KQV3 271 aa11.96□□□□□ -0.49
VTI1A-209ENST00000496445 WNT2P09544 360 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 CLUP10909 449 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 RPS2P15880 293 aaKnown RBP11.95□□□□□ -0.5
VTI1A-209ENST00000496445 ZNF823P16415 610 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 SPI1P17947 270 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 CALB2P22676 271 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 CD200P41217 278 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 TPTEP56180 551 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 PAX2Q02962 417 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 ZNF92Q03936 586 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 MALLQ13021 153 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 PCK2Q16822 640 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 MICAQ29983 383 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 ZNF404Q494X3 552 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 ESCO2Q56NI9 601 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 PRAMEF6Q5VXH4 476 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 OR2T5Q6IEZ7 315 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 PGAP1Q75T13 922 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 DCXRQ7Z4W1 244 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 KLBQ86Z14 1044 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 BPIFB2Q8N4F0 458 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 ZDHHC22Q8N966 263 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 ZNF511Q8NB15 262 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 OR2T29Q8NH02 315 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 OR2AE1Q8NHA4 323 aa11.95□□□□□ -0.5
VTI1A-209ENST00000496445 Q8TCH9 128 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms