RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 CSNK1A1P48729 337 aa2.54□□□□□ -2
CLK1-214ENST00000496205 RGS6P49758 472 aa2.54□□□□□ -2
CLK1-214ENST00000496205 DLX1P56177 255 aa2.54□□□□□ -2
CLK1-214ENST00000496205 AP1S2P56377 157 aa2.54□□□□□ -2
CLK1-214ENST00000496205 ZNF121P58317 390 aaPredicted RBP2.54□□□□□ -2
CLK1-214ENST00000496205 OR2B8PP59922 312 aa2.54□□□□□ -2
CLK1-214ENST00000496205 UBE2G2P60604 165 aa2.54□□□□□ -2
CLK1-214ENST00000496205 MYL6P60660 151 aa2.54□□□□□ -2
CLK1-214ENST00000496205 PRPS1P60891 318 aa2.54□□□□□ -2
CLK1-214ENST00000496205 SELENOTP62341 195 aa2.54□□□□□ -2
CLK1-214ENST00000496205 PITPNAQ00169 270 aa2.54□□□□□ -2
CLK1-214ENST00000496205 SLC25A11Q02978 314 aaKnown RBP2.54□□□□□ -2
CLK1-214ENST00000496205 ACVR1Q04771 509 aa2.54□□□□□ -2
CLK1-214ENST00000496205 REG3AQ06141 175 aa2.54□□□□□ -2
CLK1-214ENST00000496205 DAZ2Q13117 558 aaKnown RBP2.54□□□□□ -2
CLK1-214ENST00000496205 GPNMBQ14956 572 aa2.54□□□□□ -2
CLK1-214ENST00000496205 ZBTB6Q15916 424 aa2.54□□□□□ -2
CLK1-214ENST00000496205 TAL2Q16559 108 aa2.54□□□□□ -2
CLK1-214ENST00000496205 ZBED5Q49AG3 693 aa2.54□□□□□ -2
CLK1-214ENST00000496205 PAGE3Q5JUK9 113 aa2.54□□□□□ -2
CLK1-214ENST00000496205 RBM48Q5RL73 367 aaKnown RBP2.54□□□□□ -2
CLK1-214ENST00000496205 CPTPQ5TA50 214 aa2.54□□□□□ -2
CLK1-214ENST00000496205 FHL5Q5TD97 284 aa2.54□□□□□ -2
CLK1-214ENST00000496205 NPSR1Q6W5P4 371 aa2.54□□□□□ -2
CLK1-214ENST00000496205 MBOAT2Q6ZWT7 520 aa2.54□□□□□ -2
CLK1-214ENST00000496205 H2AFVQ71UI9 128 aa2.54□□□□□ -2
CLK1-214ENST00000496205 COX15Q7KZN9 410 aa2.54□□□□□ -2
CLK1-214ENST00000496205 MRPL52Q86TS9 123 aaKnown RBP2.54□□□□□ -2
CLK1-214ENST00000496205 HORMAD1Q86X24 394 aa2.54□□□□□ -2
CLK1-214ENST00000496205 LRRC6Q86X45 466 aa2.54□□□□□ -2
CLK1-214ENST00000496205 NELFCDQ8IXH7 590 aa2.54□□□□□ -2
CLK1-214ENST00000496205 CA13Q8N1Q1 262 aa2.54□□□□□ -2
CLK1-214ENST00000496205 PNKDQ8N490 385 aa2.54□□□□□ -2
CLK1-214ENST00000496205 C20orf203Q8NBC4 194 aa2.54□□□□□ -2
CLK1-214ENST00000496205 OR2Y1Q8NGV0 311 aa2.54□□□□□ -2
CLK1-214ENST00000496205 OR8U1Q8NH10 309 aa2.54□□□□□ -2
CLK1-214ENST00000496205 OR9G1Q8NH87 305 aa2.54□□□□□ -2
CLK1-214ENST00000496205 DOK4Q8TEW6 326 aa2.54□□□□□ -2
CLK1-214ENST00000496205 EEF1AKMT3Q96AZ1 226 aa2.54□□□□□ -2
CLK1-214ENST00000496205 CHMP6Q96FZ7 201 aa2.54□□□□□ -2
CLK1-214ENST00000496205 ALS2CR12Q96Q35 445 aa2.54□□□□□ -2
CLK1-214ENST00000496205 MICU1Q9BPX6 476 aa2.54□□□□□ -2
CLK1-214ENST00000496205 HES7Q9BYE0 225 aa2.54□□□□□ -2
CLK1-214ENST00000496205 UBE2ZQ9H832 354 aaPredicted RBP2.54□□□□□ -2
CLK1-214ENST00000496205 WDR54Q9H977 334 aa2.54□□□□□ -2
CLK1-214ENST00000496205 SH2D2AQ9NP31 389 aa2.54□□□□□ -2
CLK1-214ENST00000496205 DAZ3Q9NR90 486 aaKnown RBP2.54□□□□□ -2
CLK1-214ENST00000496205 CLCF1Q9UBD9 225 aa2.54□□□□□ -2
CLK1-214ENST00000496205 ZNF256Q9Y2P7 627 aaPredicted RBP2.54□□□□□ -2
CLK1-214ENST00000496205 ACOT9Q9Y305 439 aa2.54□□□□□ -2
CLK1-214ENST00000496205 NEUROG3Q9Y4Z2 214 aa2.54□□□□□ -2
CLK1-214ENST00000496205 KCNE3Q9Y6H6 103 aa2.54□□□□□ -2
CLK1-214ENST00000496205 MSH6P52701 1360 aa2.53□□□□□ -2
CLK1-214ENST00000496205 RLFQ13129 1914 aa2.53□□□□□ -2
CLK1-214ENST00000496205 A0A1B0GW55 424 aa2.53□□□□□ -2
CLK1-214ENST00000496205 GOLGA6L10A6NI86 522 aa2.53□□□□□ -2
CLK1-214ENST00000496205 C12orf77C9JDV5 145 aa2.53□□□□□ -2
CLK1-214ENST00000496205 hCG_2039718K7EN88 272 aa2.53□□□□□ -2
CLK1-214ENST00000496205 ZNF593O00488 134 aaPredicted RBP2.53□□□□□ -2
CLK1-214ENST00000496205 HAT1O14929 419 aa2.53□□□□□ -2
CLK1-214ENST00000496205 COCHO43405 550 aa2.53□□□□□ -2
CLK1-214ENST00000496205 SNAI2O43623 268 aa2.53□□□□□ -2
CLK1-214ENST00000496205 ZNF861PO60384 105 aa2.53□□□□□ -2
CLK1-214ENST00000496205 MOSP00540 346 aa2.53□□□□□ -2
CLK1-214ENST00000496205 GCGP01275 180 aa2.53□□□□□ -2
CLK1-214ENST00000496205 DUX4L2P0CJ85 424 aa2.53□□□□□ -2
CLK1-214ENST00000496205 DUX4L3P0CJ86 424 aa2.53□□□□□ -2
CLK1-214ENST00000496205 DUX4L5P0CJ88 424 aa2.53□□□□□ -2
CLK1-214ENST00000496205 DUX4L6P0CJ89 424 aa2.53□□□□□ -2
CLK1-214ENST00000496205 DUX4L7P0CJ90 424 aa2.53□□□□□ -2
CLK1-214ENST00000496205 SLC35E2BP0CK96 405 aa2.53□□□□□ -2
CLK1-214ENST00000496205 IGFBP3P17936 291 aaPredicted RBP2.53□□□□□ -2
CLK1-214ENST00000496205 ELK1P19419 428 aa2.53□□□□□ -2
CLK1-214ENST00000496205 CNR1P21554 472 aa2.53□□□□□ -2
CLK1-214ENST00000496205 HOXA9P31269 272 aa2.53□□□□□ -2
CLK1-214ENST00000496205 ARL2P36404 184 aa2.53□□□□□ -2
CLK1-214ENST00000496205 CTRLP40313 264 aa2.53□□□□□ -2
CLK1-214ENST00000496205 SEMG2Q02383 582 aa2.53□□□□□ -2
CLK1-214ENST00000496205 KDSRQ06136 332 aa2.53□□□□□ -2
CLK1-214ENST00000496205 C2orf54Q08AI8 447 aa2.53□□□□□ -2
CLK1-214ENST00000496205 C2orf80Q0P641 193 aa2.53□□□□□ -2
CLK1-214ENST00000496205 PDIA2Q13087 525 aaKnown RBP2.53□□□□□ -2
CLK1-214ENST00000496205 FADDQ13158 208 aa2.53□□□□□ -2
CLK1-214ENST00000496205 SLC39A6Q13433 755 aa2.53□□□□□ -2
CLK1-214ENST00000496205 GGTLC2Q14390 218 aa2.53□□□□□ -2
CLK1-214ENST00000496205 MAD2L1BPQ15013 274 aaPredicted RBP2.53□□□□□ -2
CLK1-214ENST00000496205 PSG5Q15238 335 aa2.53□□□□□ -2
CLK1-214ENST00000496205 QPRTQ15274 297 aa2.53□□□□□ -2
CLK1-214ENST00000496205 ZNF726P1Q15940 193 aa2.53□□□□□ -2
CLK1-214ENST00000496205 CCNJQ5T5M9 372 aa2.53□□□□□ -2
CLK1-214ENST00000496205 MFSD14CQ5VZR4 134 aa2.53□□□□□ -2
CLK1-214ENST00000496205 RESP18Q5W5W9 173 aa2.53□□□□□ -2
CLK1-214ENST00000496205 DUX4L9Q6RFH8 374 aaPredicted RBP2.53□□□□□ -2
CLK1-214ENST00000496205 CD300LGQ6UXG3 332 aa2.53□□□□□ -2
CLK1-214ENST00000496205 ZNF620Q6ZNG0 422 aa2.53□□□□□ -2
CLK1-214ENST00000496205 DCXRQ7Z4W1 244 aa2.53□□□□□ -2
CLK1-214ENST00000496205 SETD3Q86TU7 594 aaPredicted RBP2.53□□□□□ -2
CLK1-214ENST00000496205 KRT222Q8N1A0 295 aa2.53□□□□□ -2
CLK1-214ENST00000496205 OR6Q1Q8NGQ2 317 aa2.53□□□□□ -2
CLK1-214ENST00000496205 OR1N2Q8NGR9 330 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms