RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 NUDT16L1Q9BRJ7 211 aaKnown RBP19.4■□□□□ 0.7
COL27A1-208ENST00000494780 OR52D1Q9H346 318 aa19.4■□□□□ 0.7
COL27A1-208ENST00000494780 CLN8Q9UBY8 286 aa19.4■□□□□ 0.7
COL27A1-208ENST00000494780 TRAV40A0A0B4J280 105 aa19.39■□□□□ 0.69
COL27A1-208ENST00000494780 GMNNO75496 209 aa19.39■□□□□ 0.69
COL27A1-208ENST00000494780 MALLQ13021 153 aa19.39■□□□□ 0.69
COL27A1-208ENST00000494780 MAB21L1Q13394 359 aa19.39■□□□□ 0.69
COL27A1-208ENST00000494780 ZBTB46Q86UZ6 589 aa19.39■□□□□ 0.69
COL27A1-208ENST00000494780 LINC00346Q8IVM7 164 aa19.39■□□□□ 0.69
COL27A1-208ENST00000494780 FAM86B1Q8N7N1 296 aa19.39■□□□□ 0.69
COL27A1-208ENST00000494780 OR11L1Q8NGX0 322 aa19.39■□□□□ 0.69
COL27A1-208ENST00000494780 OR2AJ1Q8NGZ0 328 aa19.39■□□□□ 0.69
COL27A1-208ENST00000494780 OR4K13Q8NH42 304 aa19.39■□□□□ 0.69
COL27A1-208ENST00000494780 CMTM5Q96DZ9 223 aa19.39■□□□□ 0.69
COL27A1-208ENST00000494780 ATF6BQ99941 703 aa19.39■□□□□ 0.69
COL27A1-208ENST00000494780 CDADC1Q9BWV3 514 aa19.39■□□□□ 0.69
COL27A1-208ENST00000494780 SPAG4Q9NPE6 437 aa19.39■□□□□ 0.69
COL27A1-208ENST00000494780 SOX21Q9Y651 276 aaPredicted RBP19.39■□□□□ 0.69
COL27A1-208ENST00000494780 F5H5K5 113 aa19.38■□□□□ 0.69
COL27A1-208ENST00000494780 PHYHO14832 338 aa19.38■□□□□ 0.69
COL27A1-208ENST00000494780 HIST1H1CP16403 213 aaKnown RBP19.38■□□□□ 0.69
COL27A1-208ENST00000494780 CD200P41217 278 aa19.38■□□□□ 0.69
COL27A1-208ENST00000494780 WDR25Q64LD2 544 aaPredicted RBP19.38■□□□□ 0.69
COL27A1-208ENST00000494780 C16orf87Q6PH81 154 aa19.38■□□□□ 0.69
COL27A1-208ENST00000494780 FITM2Q8N6M3 262 aa19.38■□□□□ 0.69
COL27A1-208ENST00000494780 PKD1L1Q8TDX9 2849 aa19.38■□□□□ 0.69
COL27A1-208ENST00000494780 IFT27Q9BW83 186 aa19.38■□□□□ 0.69
COL27A1-208ENST00000494780 SLITRK2Q9H156 845 aa19.38■□□□□ 0.69
COL27A1-208ENST00000494780 RPRD1BQ9NQG5 326 aaKnown RBP19.38■□□□□ 0.69
COL27A1-208ENST00000494780 CYB5R1Q9UHQ9 305 aa19.38■□□□□ 0.69
COL27A1-208ENST00000494780 DOCK11Q5JSL3 2073 aa19.37■□□□□ 0.69
COL27A1-208ENST00000494780 KCNAB3O43448 404 aa19.37■□□□□ 0.69
COL27A1-208ENST00000494780 IDH3BO43837 385 aa19.37■□□□□ 0.69
COL27A1-208ENST00000494780 GADD45GO95257 159 aa19.37■□□□□ 0.69
COL27A1-208ENST00000494780 LCATP04180 440 aa19.37■□□□□ 0.69
COL27A1-208ENST00000494780 NOS3P29474 1203 aa19.37■□□□□ 0.69
COL27A1-208ENST00000494780 RAD23AP54725 363 aa19.37■□□□□ 0.69
COL27A1-208ENST00000494780 TRAP1Q12931 704 aaKnown RBP19.37■□□□□ 0.69
COL27A1-208ENST00000494780 LYPD2Q6UXB3 125 aa19.37■□□□□ 0.69
COL27A1-208ENST00000494780 PGAP1Q75T13 922 aa19.37■□□□□ 0.69
COL27A1-208ENST00000494780 SLCO4A1Q96BD0 722 aa19.37■□□□□ 0.69
COL27A1-208ENST00000494780 PRDM13Q9H4Q3 707 aa19.37■□□□□ 0.69
COL27A1-208ENST00000494780 GORASP2Q9H8Y8 452 aa19.37■□□□□ 0.69
COL27A1-208ENST00000494780 PNRC2Q9NPJ4 139 aaKnown RBP19.37■□□□□ 0.69
COL27A1-208ENST00000494780 GGT2P36268 569 aa19.36■□□□□ 0.69
COL27A1-208ENST00000494780 TPTEP56180 551 aa19.36■□□□□ 0.69
COL27A1-208ENST00000494780 PRSS12P56730 875 aa19.36■□□□□ 0.69
COL27A1-208ENST00000494780 BPIFB3P59826 476 aa19.36■□□□□ 0.69
COL27A1-208ENST00000494780 SPIBQ01892 262 aa19.36■□□□□ 0.69
COL27A1-208ENST00000494780 CLEC12AQ5QGZ9 265 aa19.36■□□□□ 0.69
COL27A1-208ENST00000494780 ZNF841Q6ZN19 808 aa19.36■□□□□ 0.69
COL27A1-208ENST00000494780 NAA40Q86UY6 237 aa19.36■□□□□ 0.69
COL27A1-208ENST00000494780 OR10S1Q8NGN2 331 aa19.36■□□□□ 0.69
COL27A1-208ENST00000494780 SPRYD4Q8WW59 207 aaPredicted RBP19.36■□□□□ 0.69
COL27A1-208ENST00000494780 PYURFQ96I23 114 aa19.36■□□□□ 0.69
COL27A1-208ENST00000494780 SLC22A4Q9H015 551 aa19.36■□□□□ 0.69
COL27A1-208ENST00000494780 ADA2Q9NZK5 511 aa19.36■□□□□ 0.69
COL27A1-208ENST00000494780 KCNG2Q9UJ96 466 aa19.36■□□□□ 0.69
COL27A1-208ENST00000494780 NOP16Q9Y3C1 178 aaKnown RBP19.36■□□□□ 0.69
COL27A1-208ENST00000494780 OR6C68A6NDL8 312 aa19.35■□□□□ 0.69
COL27A1-208ENST00000494780 ENSAO43768 121 aaKnown RBP19.35■□□□□ 0.69
COL27A1-208ENST00000494780 FAM20BO75063 409 aa19.35■□□□□ 0.69
COL27A1-208ENST00000494780 HLA-DQA2P01906 255 aa19.35■□□□□ 0.69
COL27A1-208ENST00000494780 SEMG1P04279 462 aa19.35■□□□□ 0.69
COL27A1-208ENST00000494780 IFNGR2P38484 337 aa19.35■□□□□ 0.69
COL27A1-208ENST00000494780 PSMB10P40306 273 aa19.35■□□□□ 0.69
COL27A1-208ENST00000494780 NPY4RP50391 375 aa19.35■□□□□ 0.69
COL27A1-208ENST00000494780 FGF12P61328 243 aa19.35■□□□□ 0.69
COL27A1-208ENST00000494780 DBPQ10586 325 aaPredicted RBP19.35■□□□□ 0.69
COL27A1-208ENST00000494780 PRAMEF6Q5VXH4 476 aa19.35■□□□□ 0.69
COL27A1-208ENST00000494780 MRPL21Q7Z2W9 205 aaKnown RBP19.35■□□□□ 0.69
COL27A1-208ENST00000494780 TMIGD2Q96BF3 282 aa19.35■□□□□ 0.69
COL27A1-208ENST00000494780 UFSP2Q9NUQ7 469 aa19.35■□□□□ 0.69
COL27A1-208ENST00000494780 MMP24Q9Y5R2 645 aa19.35■□□□□ 0.69
COL27A1-208ENST00000494780 MDFIC2A0A1B0GVS7 189 aa19.34■□□□□ 0.69
COL27A1-208ENST00000494780 HOXA3O43365 443 aaPredicted RBP19.34■□□□□ 0.69
COL27A1-208ENST00000494780 OR10H3O60404 316 aa19.34■□□□□ 0.69
COL27A1-208ENST00000494780 PRDX6P30041 224 aa19.34■□□□□ 0.69
COL27A1-208ENST00000494780 OR8G1Q15617 311 aa19.34■□□□□ 0.69
COL27A1-208ENST00000494780 KCNJ8Q15842 424 aa19.34■□□□□ 0.69
COL27A1-208ENST00000494780 DEFB112Q30KQ8 113 aa19.34■□□□□ 0.69
COL27A1-208ENST00000494780 GPR157Q5UAW9 335 aa19.34■□□□□ 0.69
COL27A1-208ENST00000494780 TREML4Q6UXN2 200 aa19.34■□□□□ 0.69
COL27A1-208ENST00000494780 SPATC1Q76KD6 591 aa19.34■□□□□ 0.69
COL27A1-208ENST00000494780 RNF148Q8N7C7 305 aa19.34■□□□□ 0.69
COL27A1-208ENST00000494780 SDR9C7Q8NEX9 313 aa19.34■□□□□ 0.69
COL27A1-208ENST00000494780 SPTSSAQ969W0 71 aa19.34■□□□□ 0.69
COL27A1-208ENST00000494780 ZDHHC16Q969W1 377 aa19.34■□□□□ 0.69
COL27A1-208ENST00000494780 MYLK2Q9H1R3 596 aa19.34■□□□□ 0.69
COL27A1-208ENST00000494780 FN3KRPQ9HA64 309 aa19.34■□□□□ 0.69
COL27A1-208ENST00000494780 ZNF446Q9NWS9 450 aa19.34■□□□□ 0.69
COL27A1-208ENST00000494780 MRPL22Q9NWU5 206 aaKnown RBP19.34■□□□□ 0.69
COL27A1-208ENST00000494780 RNF7Q9UBF6 113 aa19.34■□□□□ 0.69
COL27A1-208ENST00000494780 TMCC3Q9ULS5 477 aa19.34■□□□□ 0.69
COL27A1-208ENST00000494780 V9GYQ6 96 aa19.34■□□□□ 0.69
COL27A1-208ENST00000494780 C22orf46C9J442 243 aa19.33■□□□□ 0.68
COL27A1-208ENST00000494780 M0R135 149 aa19.33■□□□□ 0.68
COL27A1-208ENST00000494780 MDKP21741 143 aaPredicted RBP19.33■□□□□ 0.68
COL27A1-208ENST00000494780 GSSP48637 474 aa19.33■□□□□ 0.68
COL27A1-208ENST00000494780 MPPED2Q15777 294 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms