RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 CLEC12AQ5QGZ9 265 aa12.15□□□□□ -0.46
PCCB-219ENST00000494742 FAM201AQ5SY85 155 aa12.15□□□□□ -0.46
PCCB-219ENST00000494742 DPY19L2P2Q6ZN68 376 aa12.15□□□□□ -0.46
PCCB-219ENST00000494742 CBLL1Q75N03 491 aa12.15□□□□□ -0.46
PCCB-219ENST00000494742 RHOUQ7L0Q8 258 aa12.15□□□□□ -0.46
PCCB-219ENST00000494742 PNLDC1Q8NA58 520 aaKnown RBP12.15□□□□□ -0.46
PCCB-219ENST00000494742 PLPP7Q8NBV4 271 aa12.15□□□□□ -0.46
PCCB-219ENST00000494742 SLC7A13Q8TCU3 470 aa12.15□□□□□ -0.46
PCCB-219ENST00000494742 GATAD2BQ8WXI9 593 aa12.15□□□□□ -0.46
PCCB-219ENST00000494742 PCGF1Q9BSM1 259 aa12.15□□□□□ -0.46
PCCB-219ENST00000494742 TRIM15Q9C019 465 aa12.15□□□□□ -0.46
PCCB-219ENST00000494742 SAR1AQ9NR31 198 aa12.15□□□□□ -0.46
PCCB-219ENST00000494742 ACOXLQ9NUZ1 547 aa12.15□□□□□ -0.46
PCCB-219ENST00000494742 ARMCX1Q9P291 453 aa12.15□□□□□ -0.46
PCCB-219ENST00000494742 ERVK-18Q9QC07 812 aa12.15□□□□□ -0.46
PCCB-219ENST00000494742 IGHV3-64DA0A0J9YX35 117 aa12.14□□□□□ -0.47
PCCB-219ENST00000494742 CENPVL3A0A0U1RRI6 287 aa12.14□□□□□ -0.47
PCCB-219ENST00000494742 LOC100653049A0A140TA62 436 aa12.14□□□□□ -0.47
PCCB-219ENST00000494742 A0A1W2PRQ8 180 aa12.14□□□□□ -0.47
PCCB-219ENST00000494742 C22orf46C9J442 243 aa12.14□□□□□ -0.47
PCCB-219ENST00000494742 SOCS2O14508 198 aa12.14□□□□□ -0.47
PCCB-219ENST00000494742 FAM20BO75063 409 aa12.14□□□□□ -0.47
PCCB-219ENST00000494742 KRT34O76011 436 aa12.14□□□□□ -0.47
PCCB-219ENST00000494742 PTBP3O95758 552 aaKnown RBP12.14□□□□□ -0.47
PCCB-219ENST00000494742 ZNF682O95780 498 aa12.14□□□□□ -0.47
PCCB-219ENST00000494742 HLA-DPB1P04440 258 aa12.14□□□□□ -0.47
PCCB-219ENST00000494742 MMP9P14780 707 aa12.14□□□□□ -0.47
PCCB-219ENST00000494742 DGCR6Q14129 220 aa12.14□□□□□ -0.47
PCCB-219ENST00000494742 GK2Q14410 553 aaPredicted RBP12.14□□□□□ -0.47
PCCB-219ENST00000494742 RSPO1Q2MKA7 263 aaPredicted RBP12.14□□□□□ -0.47
PCCB-219ENST00000494742 OTPQ5XKR4 325 aa12.14□□□□□ -0.47
PCCB-219ENST00000494742 FKBP9P1Q75LS8 142 aa12.14□□□□□ -0.47
PCCB-219ENST00000494742 FAM46AQ96IP4 442 aaKnown RBP12.14□□□□□ -0.47
PCCB-219ENST00000494742 WDFY2Q96P53 400 aa12.14□□□□□ -0.47
PCCB-219ENST00000494742 FN3KRPQ9HA64 309 aa12.14□□□□□ -0.47
PCCB-219ENST00000494742 KRCC1Q9NPI7 259 aaPredicted RBP12.14□□□□□ -0.47
PCCB-219ENST00000494742 TNFRSF19Q9NS68 423 aa12.14□□□□□ -0.47
PCCB-219ENST00000494742 RNF7Q9UBF6 113 aa12.14□□□□□ -0.47
PCCB-219ENST00000494742 TMCC3Q9ULS5 477 aa12.14□□□□□ -0.47
PCCB-219ENST00000494742 RNF114Q9Y508 228 aa12.14□□□□□ -0.47
PCCB-219ENST00000494742 ENPP4Q9Y6X5 453 aa12.14□□□□□ -0.47
PCCB-219ENST00000494742 IGLV1-36A0A0B4J1U3 117 aa12.13□□□□□ -0.47
PCCB-219ENST00000494742 CXCR6O00574 342 aa12.13□□□□□ -0.47
PCCB-219ENST00000494742 IMPA2O14732 288 aa12.13□□□□□ -0.47
PCCB-219ENST00000494742 SLC22A2O15244 555 aa12.13□□□□□ -0.47
PCCB-219ENST00000494742 RRP9O43818 475 aaKnown RBP12.13□□□□□ -0.47
PCCB-219ENST00000494742 GMDSO60547 372 aa12.13□□□□□ -0.47
PCCB-219ENST00000494742 CLPXO76031 633 aa12.13□□□□□ -0.47
PCCB-219ENST00000494742 PPP1R3DO95685 299 aa12.13□□□□□ -0.47
PCCB-219ENST00000494742 SFTPBP07988 381 aa12.13□□□□□ -0.47
PCCB-219ENST00000494742 ACSM4P0C7M7 580 aa12.13□□□□□ -0.47
PCCB-219ENST00000494742 TROVE2P10155 538 aaKnown RBP eCLIP12.13□□□□□ -0.47
PCCB-219ENST00000494742 CDKN2AP42771 156 aaKnown RBP12.13□□□□□ -0.47
PCCB-219ENST00000494742 SLC36A3Q495N2 470 aa12.13□□□□□ -0.47
PCCB-219ENST00000494742 METTL11BQ5VVY1 283 aa12.13□□□□□ -0.47
PCCB-219ENST00000494742 RUSC1-AS1Q66K80 236 aa12.13□□□□□ -0.47
PCCB-219ENST00000494742 ASPHD2Q6ICH7 369 aa12.13□□□□□ -0.47
PCCB-219ENST00000494742 PTCHD4Q6ZW05 846 aa12.13□□□□□ -0.47
PCCB-219ENST00000494742 LDLRAD3Q86YD5 345 aa12.13□□□□□ -0.47
PCCB-219ENST00000494742 HSH2DQ96JZ2 352 aa12.13□□□□□ -0.47
PCCB-219ENST00000494742 TECTBQ96PL2 329 aa12.13□□□□□ -0.47
PCCB-219ENST00000494742 TBX15Q96SF7 602 aa12.13□□□□□ -0.47
PCCB-219ENST00000494742 RBM4BQ9BQ04 359 aaKnown RBP12.13□□□□□ -0.47
PCCB-219ENST00000494742 WDR76Q9H967 626 aa12.13□□□□□ -0.47
PCCB-219ENST00000494742 RPS6KA6Q9UK32 745 aa12.13□□□□□ -0.47
PCCB-219ENST00000494742 IER3IP1Q9Y5U9 82 aa12.13□□□□□ -0.47
PCCB-219ENST00000494742 CMYA5Q8N3K9 4069 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 IGHV1-69DA0A0B4J2H0 117 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 LGALS8O00214 317 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 ECDO95905 644 aaPredicted RBP12.12□□□□□ -0.47
PCCB-219ENST00000494742 IGHV1-69P01742 117 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 H1F0P07305 194 aaKnown RBP12.12□□□□□ -0.47
PCCB-219ENST00000494742 MDH1P40925 334 aaKnown RBP12.12□□□□□ -0.47
PCCB-219ENST00000494742 OMPP47874 163 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 CENPAP49450 140 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 MPPED2Q15777 294 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 TAF9Q16594 264 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 MEP1BQ16820 701 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 SLC18B1Q6NT16 456 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 CORO6Q6QEF8 472 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 PGAP1Q75T13 922 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 SLC15A3Q8IY34 581 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 SLC26A10Q8NG04 563 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 LINC01006Q8NI28 216 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 SPRYD4Q8WW59 207 aaPredicted RBP12.12□□□□□ -0.47
PCCB-219ENST00000494742 UBE2FQ969M7 185 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 RSRC1Q96IZ7 334 aaKnown RBP12.12□□□□□ -0.47
PCCB-219ENST00000494742 TSSK2Q96PF2 358 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 PITX2Q99697 317 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 ATF6BQ99941 703 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 MMADHCQ9H3L0 296 aaPredicted RBP12.12□□□□□ -0.47
PCCB-219ENST00000494742 CMTM6Q9NX76 183 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 CTSZQ9UBR2 303 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 B9D1Q9UPM9 204 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 AURKCQ9UQB9 309 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 WNK1Q9H4A3 2382 aa12.12□□□□□ -0.47
PCCB-219ENST00000494742 TRAV38-1A0A0B4J264 116 aa12.11□□□□□ -0.47
PCCB-219ENST00000494742 SLC22A31A6NKX4 558 aa12.11□□□□□ -0.47
PCCB-219ENST00000494742 F5H5K5 113 aa12.11□□□□□ -0.47
PCCB-219ENST00000494742 DCTN6O00399 190 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms