RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 VIPAS39Q9H9C1 493 aa10.53□□□□□ -0.72
SKA1-205ENST00000494518 MRGBPQ9NV56 204 aa10.53□□□□□ -0.72
SKA1-205ENST00000494518 IGLV1-36A0A0B4J1U3 117 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 KIR2DS1A0A191URI9 304 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 J3QW42 95 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 LCATP04180 440 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 ACSM4P0C7M7 580 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 PPIAL4GP0DN37 164 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 ANOS1P23352 680 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 RPS6KA3P51812 740 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 HIST1H3AP68431 136 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 GK2Q14410 553 aaPredicted RBP10.52□□□□□ -0.73
SKA1-205ENST00000494518 KCNMB1Q16558 191 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 HIST2H3PS2Q5TEC6 136 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 GPR157Q5UAW9 335 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 SFRP4Q6FHJ7 346 aaPredicted RBP10.52□□□□□ -0.73
SKA1-205ENST00000494518 DNM1P34Q6PK57 102 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 FIP1L1Q6UN15 594 aaKnown RBP10.52□□□□□ -0.73
SKA1-205ENST00000494518 DPY19L2P2Q6ZN68 376 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 HIST2H3AQ71DI3 136 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 C1orf87Q8N0U7 546 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 OR6V1Q8N148 313 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 FAM86B1Q8N7N1 296 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 OR4K13Q8NH42 304 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 SLCO4A1Q96BD0 722 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 NMNAT3Q96T66 252 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 ANKRD19PQ9H560 264 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 RPRD1BQ9NQG5 326 aaKnown RBP10.52□□□□□ -0.73
SKA1-205ENST00000494518 NDUFAF4Q9P032 175 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 CTSZQ9UBR2 303 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 ATPIF1Q9UII2 106 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 B9D1Q9UPM9 204 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 AP3M1Q9Y2T2 418 aa10.52□□□□□ -0.73
SKA1-205ENST00000494518 FAM32AQ9Y421 112 aaKnown RBP10.52□□□□□ -0.73
SKA1-205ENST00000494518 A0A1W2PRQ8 180 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 SRRM5B3KS81 715 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 TXNDC12O95881 172 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 KNG1P01042 644 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 HLA-DQA2P01906 255 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 CA6P23280 308 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 CRABP1P29762 137 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 MDH1P40925 334 aaKnown RBP10.51□□□□□ -0.73
SKA1-205ENST00000494518 NUDT2P50583 147 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 RAG2P55895 527 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 COX10Q12887 443 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 DGCR6Q14129 220 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 ZNF181Q2M3W8 571 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 CLEC12AQ5QGZ9 265 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 SLC18B1Q6NT16 456 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 BRICD5Q6PL45 260 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 SMARCD3Q6STE5 483 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 ZNF841Q6ZN19 808 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 DCDC5Q6ZRR9 648 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 SDR9C7Q8NEX9 313 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 SLC26A10Q8NG04 563 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 OR11L1Q8NGX0 322 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 RP9Q8TA86 221 aaKnown RBP10.51□□□□□ -0.73
SKA1-205ENST00000494518 SPRYD4Q8WW59 207 aaPredicted RBP10.51□□□□□ -0.73
SKA1-205ENST00000494518 WFDC12Q8WWY7 111 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 CHIAQ9BZP6 476 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 SLITRK2Q9H156 845 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 RASSF4Q9H2L5 321 aa10.51□□□□□ -0.73
SKA1-205ENST00000494518 ARGLU1Q9NWB6 273 aaPredicted RBP10.51□□□□□ -0.73
SKA1-205ENST00000494518 PDP1Q9P0J1 537 aaPredicted RBP10.51□□□□□ -0.73
SKA1-205ENST00000494518 C5orf63A6NC05 138 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 PHYHO14832 338 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 ENSAO43768 121 aaKnown RBP10.5□□□□□ -0.73
SKA1-205ENST00000494518 RENP00797 406 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 CRYBA1P05813 215 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 H2AFXP16104 143 aaPredicted RBP10.5□□□□□ -0.73
SKA1-205ENST00000494518 HIST1H1CP16403 213 aaKnown RBP10.5□□□□□ -0.73
SKA1-205ENST00000494518 RHCEP18577 417 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 CFHR2P36980 270 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 CD200P41217 278 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 RPS27P42677 84 aaKnown RBP10.5□□□□□ -0.73
SKA1-205ENST00000494518 RAD23AP54725 363 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 RELBQ01201 579 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 TRAP1Q12931 704 aaKnown RBP10.5□□□□□ -0.73
SKA1-205ENST00000494518 MALLQ13021 153 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 OR8G1Q15617 311 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 KRTAP27-1Q3LI81 207 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 C8orf82Q6P1X6 216 aaPredicted RBP10.5□□□□□ -0.73
SKA1-205ENST00000494518 PGM2L1Q6PCE3 622 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 C17orf107Q6ZR85 190 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 COLCA1Q6ZS62 124 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 PGAP1Q75T13 922 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 MRPL21Q7Z2W9 205 aaKnown RBP10.5□□□□□ -0.73
SKA1-205ENST00000494518 PDZD9Q8IXQ8 264 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 LNX2Q8N448 690 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 RNF148Q8N7C7 305 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 OR2AE1Q8NHA4 323 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 ATF6BQ99941 703 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 HOPXQ9BPY8 73 aaPredicted RBP10.5□□□□□ -0.73
SKA1-205ENST00000494518 ADAT1Q9BUB4 502 aaKnown RBP10.5□□□□□ -0.73
SKA1-205ENST00000494518 IFT27Q9BW83 186 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 NSRP1Q9H0G5 558 aaKnown RBP10.5□□□□□ -0.73
SKA1-205ENST00000494518 OR52D1Q9H346 318 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 C1RLQ9NZP8 487 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 N6AMT1Q9Y5N5 214 aa10.5□□□□□ -0.73
SKA1-205ENST00000494518 SLC22A2O15244 555 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms