RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 CORO6Q6QEF8 472 aa17.35■□□□□ 0.37
COL27A1-207ENST00000494090 SUMF1Q8NBK3 374 aa17.35■□□□□ 0.37
COL27A1-207ENST00000494090 EDEM2Q9BV94 578 aa17.35■□□□□ 0.37
COL27A1-207ENST00000494090 TRAPPC4Q9Y296 219 aa17.35■□□□□ 0.37
COL27A1-207ENST00000494090 CXCL13O43927 109 aa17.35■□□□□ 0.37
COL27A1-207ENST00000494090 EPXP11678 715 aa17.35■□□□□ 0.37
COL27A1-207ENST00000494090 GZMKP49863 264 aa17.35■□□□□ 0.37
COL27A1-207ENST00000494090 FOXQ1Q9C009 403 aa17.35■□□□□ 0.37
COL27A1-207ENST00000494090 A0A0B4J203 849 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 CSN1S1P47710 185 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 WNT3P56703 355 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 CROCCQ5TZA2 2017 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 KCNE1BA0A087WTH5 132 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 HRO43593 1189 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 METTL15P1P0C7V9 234 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 SSBP1Q04837 148 aaKnown RBP17.34■□□□□ 0.37
COL27A1-207ENST00000494090 TRA2AQ13595 282 aaKnown RBP eCLIP17.34■□□□□ 0.373e-7■■■■■ 36
COL27A1-207ENST00000494090 PCK2Q16822 640 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 C9orf152Q5JTZ5 239 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 LHX8Q68G74 356 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 LAIR1Q6GTX8 287 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 OR52N5Q8NH56 324 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 TAAR9Q96RI9 348 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 SIGLEC11Q96RL6 698 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 DLL4Q9NR61 685 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 A0A1W2PNR3 127 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 ABCD4O14678 606 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 MT-ND4LP03901 98 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 GLRA1P23415 457 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 EIF3IQ13347 325 aaKnown RBP17.34■□□□□ 0.37
COL27A1-207ENST00000494090 ARSGQ96EG1 525 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 PLA2G12AQ9BZM1 189 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 SLIRPQ9GZT3 109 aaKnown RBP17.34■□□□□ 0.37
COL27A1-207ENST00000494090 SIRT5Q9NXA8 310 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 SPTY2D1-AS1A0A0U1RR47 76 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 IMPA2O14732 288 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 GPR12P47775 334 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 TECTBQ96PL2 329 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 PURGQ9UJV8 347 aaKnown RBP17.34■□□□□ 0.37
COL27A1-207ENST00000494090 FLVCR2Q9UPI3 526 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 CRYABP02511 175 aaKnown RBP17.34■□□□□ 0.37
COL27A1-207ENST00000494090 OR10J4P0C629 311 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 ACKR3P25106 362 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 CLDN15P56746 228 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 KIRREL2Q6UWL6 708 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 OR2G3Q8NGZ4 309 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 ASB13Q8WXK3 278 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 C8orf44Q96CB5 159 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 ZNF2Q9BSG1 426 aaPredicted RBP17.34■□□□□ 0.37
COL27A1-207ENST00000494090 CTSFQ9UBX1 484 aa17.34■□□□□ 0.37
COL27A1-207ENST00000494090 JTBO76095 146 aa17.33■□□□□ 0.37
COL27A1-207ENST00000494090 PSMB6P28072 239 aa17.33■□□□□ 0.37
COL27A1-207ENST00000494090 MMP15P51511 669 aa17.33■□□□□ 0.37
COL27A1-207ENST00000494090 ZNF468Q5VIY5 522 aaPredicted RBP17.33■□□□□ 0.37
COL27A1-207ENST00000494090 OR2A2Q6IF42 318 aa17.33■□□□□ 0.37
COL27A1-207ENST00000494090 H3F3CQ6NXT2 135 aa17.33■□□□□ 0.37
COL27A1-207ENST00000494090 ZNF439Q8NDP4 499 aa17.33■□□□□ 0.37
COL27A1-207ENST00000494090 IL20Q9NYY1 176 aa17.33■□□□□ 0.37
COL27A1-207ENST00000494090 SLC5A6Q9Y289 635 aa17.33■□□□□ 0.37
COL27A1-207ENST00000494090 CRYM-AS1A6NIL9 109 aa17.33■□□□□ 0.36
COL27A1-207ENST00000494090 DTYMKP23919 212 aa17.33■□□□□ 0.36
COL27A1-207ENST00000494090 CDC20BQ86Y33 519 aa17.33■□□□□ 0.36
COL27A1-207ENST00000494090 ZNF683Q8IZ20 524 aa17.33■□□□□ 0.36
COL27A1-207ENST00000494090 OR2G2Q8NGZ5 317 aa17.33■□□□□ 0.36
COL27A1-207ENST00000494090 OR51H1Q8NH63 302 aa17.33■□□□□ 0.36
COL27A1-207ENST00000494090 SMIM4Q8WVI0 70 aa17.33■□□□□ 0.36
COL27A1-207ENST00000494090 GINS3Q9BRX5 216 aa17.33■□□□□ 0.36
COL27A1-207ENST00000494090 FBXL4Q9UKA2 621 aa17.33■□□□□ 0.36
COL27A1-207ENST00000494090 OR5H14A6NHG9 310 aa17.33■□□□□ 0.36
COL27A1-207ENST00000494090 OR2J2O76002 312 aa17.33■□□□□ 0.36
COL27A1-207ENST00000494090 TAGLN2P37802 199 aaKnown RBP17.33■□□□□ 0.36
COL27A1-207ENST00000494090 NLRC3Q7RTR2 1065 aa17.33■□□□□ 0.36
COL27A1-207ENST00000494090 TCTE3Q8IZS6 198 aa17.33■□□□□ 0.36
COL27A1-207ENST00000494090 OR10X1Q8NGY0 326 aa17.33■□□□□ 0.36
COL27A1-207ENST00000494090 NKX6-2Q9C056 277 aaPredicted RBP17.33■□□□□ 0.36
COL27A1-207ENST00000494090 GPR84Q9NQS5 396 aa17.33■□□□□ 0.36
COL27A1-207ENST00000494090 C5orf49A4QMS7 147 aa17.33■□□□□ 0.36
COL27A1-207ENST00000494090 GNPNAT1Q96EK6 184 aaPredicted RBP17.33■□□□□ 0.36
COL27A1-207ENST00000494090 PRDM7Q9NQW5 492 aa17.33■□□□□ 0.36
COL27A1-207ENST00000494090 LIN7CQ9NUP9 197 aaKnown RBP17.33■□□□□ 0.36
COL27A1-207ENST00000494090 LAMP3Q9UQV4 416 aa17.33■□□□□ 0.36
COL27A1-207ENST00000494090 SLC22A13Q9Y226 551 aa17.33■□□□□ 0.36
COL27A1-207ENST00000494090 TRAF3IP2O43734 574 aaPredicted RBP17.32■□□□□ 0.36
COL27A1-207ENST00000494090 CD3DP04234 171 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 OR4E1P0C645 316 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 HOXD11P31277 338 aaPredicted RBP17.32■□□□□ 0.36
COL27A1-207ENST00000494090 PBOV1Q9GZY1 135 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 WSB2Q9NYS7 404 aaPredicted RBP17.32■□□□□ 0.36
COL27A1-207ENST00000494090 SLC22A20A6NK97 555 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 OR2V1Q8NHB1 315 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 AUNIPQ9H7T9 357 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 ZNF629Q9UEG4 869 aaPredicted RBP17.32■□□□□ 0.36
COL27A1-207ENST00000494090 C2CD4DB7Z1M9 353 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 TAS2R45P59539 299 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 RNF4P78317 190 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 DEFB109BQ30KR1 87 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 FAAP20Q6NZ36 180 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 ZDHHC23Q8IYP9 409 aa17.32■□□□□ 0.36
COL27A1-207ENST00000494090 KDF1Q8NAX2 398 aaPredicted RBP17.32■□□□□ 0.36
COL27A1-207ENST00000494090 CADM4Q8NFZ8 388 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms