RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 IL15RAQ13261 267 aa2.49□□□□□ -2.01
SSB-212ENST00000494051 COTL1Q14019 142 aa2.49□□□□□ -2.01
SSB-212ENST00000494051 RNASE13Q5GAN3 156 aaKnown RBP2.49□□□□□ -2.01
SSB-212ENST00000494051 RNASEKQ6P5S7 137 aaKnown RBP2.49□□□□□ -2.01
SSB-212ENST00000494051 MTERF4Q7Z6M4 381 aaKnown RBP2.49□□□□□ -2.01
SSB-212ENST00000494051 COMTD1Q86VU5 262 aa2.49□□□□□ -2.01
SSB-212ENST00000494051 SYCE1Q8N0S2 351 aa2.49□□□□□ -2.01
SSB-212ENST00000494051 KRT222Q8N1A0 295 aa2.49□□□□□ -2.01
SSB-212ENST00000494051 PRELID2Q8N945 189 aa2.49□□□□□ -2.01
SSB-212ENST00000494051 NT5C3BQ969T7 300 aa2.49□□□□□ -2.01
SSB-212ENST00000494051 C19orf60Q96EN9 201 aa2.49□□□□□ -2.01
SSB-212ENST00000494051 DUS3LQ96G46 650 aaKnown RBP2.49□□□□□ -2.01
SSB-212ENST00000494051 CATSPER2Q96P56 530 aa2.49□□□□□ -2.01
SSB-212ENST00000494051 RBBP8Q99708 897 aa2.49□□□□□ -2.01
SSB-212ENST00000494051 RSG1Q9BU20 258 aa2.49□□□□□ -2.01
SSB-212ENST00000494051 EXOSC4Q9NPD3 245 aaKnown RBP2.49□□□□□ -2.01
SSB-212ENST00000494051 CHRAC1Q9NRG0 131 aa2.49□□□□□ -2.01
SSB-212ENST00000494051 DHCR7Q9UBM7 475 aaKnown RBP2.49□□□□□ -2.01
SSB-212ENST00000494051 CSDC2Q9Y534 153 aaKnown RBP2.49□□□□□ -2.01
SSB-212ENST00000494051 ADGRL1O94910 1474 aa2.49□□□□□ -2.01
SSB-212ENST00000494051 SHANK1Q9Y566 2161 aa2.49□□□□□ -2.01
SSB-212ENST00000494051 BRD4O60885 1362 aaPredicted RBP2.49□□□□□ -2.01
SSB-212ENST00000494051 DHX57Q6P158 1386 aaKnown RBP2.49□□□□□ -2.01
SSB-212ENST00000494051 PLEKHG2Q9H7P9 1386 aa2.49□□□□□ -2.01
SSB-212ENST00000494051 SCN1AP35498 2009 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 COL5A1P20908 1838 aaPredicted RBP2.48□□□□□ -2.01
SSB-212ENST00000494051 ERICH2A1L162 156 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 ZNF98A6NK75 572 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 VGLL3A8MV65 326 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 ZNF879B4DU55 563 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 RNF113AO15541 343 aaKnown RBP2.48□□□□□ -2.01
SSB-212ENST00000494051 SLC22A5O76082 557 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 SMC2O95347 1197 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 TSPAN13O95857 204 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 AGTP01019 485 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 ANXA5P08758 320 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 ERGP11308 486 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 PRKACBP22694 351 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 COL8A2P25067 703 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 NAA10P41227 235 aaPredicted RBP2.48□□□□□ -2.01
SSB-212ENST00000494051 MAP3K7CLP57077 242 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 EIF3EP60228 445 aaKnown RBP2.48□□□□□ -2.01
SSB-212ENST00000494051 KRTAP12-3P60328 96 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 TGM3Q08188 693 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 IDI1Q13907 227 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 IL18Q14116 193 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 TAF9Q16594 264 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 ARMC12Q5T9G4 340 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 GPR107Q5VW38 600 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 SPINT4Q6UDR6 99 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 SASS6Q6UVJ0 657 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 TMEM107Q6UX40 140 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 TMEM150AQ86TG1 271 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 LINC00469Q8N7U9 141 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 NECAB1Q8N987 351 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 TMEM104Q8NE00 496 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 DDI1Q8WTU0 396 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 KIFAP3Q92845 792 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 RASD2Q96D21 266 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 ARL5BQ96KC2 179 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 LHX5Q9H2C1 402 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 EXO5Q9H790 373 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 ZNF586Q9NXT0 402 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 SLC2A8Q9NY64 477 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 C15orf41Q9Y2V0 281 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 CARHSP1Q9Y2V2 147 aaKnown RBP2.48□□□□□ -2.01
SSB-212ENST00000494051 UBIAD1Q9Y5Z9 338 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 GMEB1Q9Y692 573 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 USP47Q96K76 1375 aa2.48□□□□□ -2.01
SSB-212ENST00000494051 LOC100506127A0A0U1RQW1 187 aa2.47□□□□□ -2.01
SSB-212ENST00000494051 BTNL10A8MVZ5 291 aa2.47□□□□□ -2.01
SSB-212ENST00000494051 HSBP1L1C9JCN9 74 aa2.47□□□□□ -2.01
SSB-212ENST00000494051 DNALI1O14645 258 aaPredicted RBP2.47□□□□□ -2.01
SSB-212ENST00000494051 YKT6O15498 198 aa2.47□□□□□ -2.01
SSB-212ENST00000494051 CDC40O60508 579 aaKnown RBP eCLIP2.47□□□□□ -2.01
SSB-212ENST00000494051 SEMA3DO95025 777 aa2.47□□□□□ -2.01
SSB-212ENST00000494051 CSTAP01040 98 aa2.47□□□□□ -2.01
SSB-212ENST00000494051 IGLV3-25P01717 112 aa2.47□□□□□ -2.01
SSB-212ENST00000494051 CD37P11049 281 aa2.47□□□□□ -2.01
SSB-212ENST00000494051 SLC2A3P11169 496 aa2.47□□□□□ -2.01
SSB-212ENST00000494051 LOXP28300 417 aaPredicted RBP2.47□□□□□ -2.01
SSB-212ENST00000494051 GDI2P50395 445 aaKnown RBP2.47□□□□□ -2.01
SSB-212ENST00000494051 SYNJ2BPP57105 145 aa2.47□□□□□ -2.01
SSB-212ENST00000494051 FLI1Q01543 452 aaPredicted RBP2.47□□□□□ -2.01
SSB-212ENST00000494051 FUT5Q11128 374 aa2.47□□□□□ -2.01
SSB-212ENST00000494051 SRSF5Q13243 272 aaKnown RBP2.47□□□□□ -2.01
SSB-212ENST00000494051 ANGPT1Q15389 498 aa2.47□□□□□ -2.01
SSB-212ENST00000494051 ZNF726P1Q15940 193 aa2.47□□□□□ -2.01
SSB-212ENST00000494051 Q3ZCU0 254 aa2.47□□□□□ -2.01
SSB-212ENST00000494051 PDPK2PQ6A1A2 396 aa2.47□□□□□ -2.01
SSB-212ENST00000494051 FAM228AQ86W67 206 aa2.47□□□□□ -2.01
SSB-212ENST00000494051 NKAIN4Q8IVV8 208 aa2.47□□□□□ -2.01
SSB-212ENST00000494051 APCDD1LQ8NCL9 501 aa2.47□□□□□ -2.01
SSB-212ENST00000494051 BPIFCQ8NFQ6 507 aa2.47□□□□□ -2.01
SSB-212ENST00000494051 OR9K2Q8NGE7 335 aa2.47□□□□□ -2.01
SSB-212ENST00000494051 KIAA1143Q96AT1 154 aaPredicted RBP2.47□□□□□ -2.01
SSB-212ENST00000494051 DCPSQ96C86 337 aaKnown RBP2.47□□□□□ -2.01
SSB-212ENST00000494051 GGTLC1Q9BX51 225 aa2.47□□□□□ -2.01
SSB-212ENST00000494051 FRMD8P1Q9BZ68 369 aaPredicted RBP2.47□□□□□ -2.01
SSB-212ENST00000494051 NSRP1Q9H0G5 558 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms