RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 EI24O14681 340 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 TBX1O43435 398 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 NCR1O76036 304 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 ANXA2P07355 339 aaKnown RBP8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 MRPL3P09001 348 aaKnown RBP8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 H2BFMP0C1H6 154 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 SLC2A1P11166 492 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 USF1P22415 310 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 TNFSF4P23510 183 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 EPHA2P29317 976 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 POLR2IP36954 125 aaKnown RBP8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 LIPAP38571 399 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 RAD23AP54725 363 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 PRSS12P56730 875 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 RSPO1Q2MKA7 263 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 PCGF3Q3KNV8 242 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 ZIK1Q3SY52 487 aaPredicted RBP8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 TEX30Q5JUR7 227 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 SLC35D3Q5M8T2 416 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 OR2T2Q6IF00 324 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 USP51Q70EK9 711 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 MRPL21Q7Z2W9 205 aaKnown RBP8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 BCDIN3DQ7Z5W3 292 aaKnown RBP8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 TIGD4Q8IY51 512 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 ZNF786Q8N393 782 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 PIP4P2Q8N4L2 257 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 ZNF540Q8NDQ6 660 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 OR2Z1Q8NG97 314 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 HAVCR1Q96D42 359 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 ABHD6Q9BV23 337 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 OSBPL10Q9BXB5 764 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 C1QTNF5Q9BXJ0 243 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 BPESC1Q9GZL8 116 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 EGLN1Q9GZT9 426 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 SAP30LQ9HAJ7 183 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 BRD7Q9NPI1 651 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 DDX28Q9NUL7 540 aaKnown RBP8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 LAMP5Q9UJQ1 280 aa8.87□□□□□ -0.99
TRAPPC12-222ENST00000493792 IGHV1-69-2A0A0G2JMI3 117 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 ANKRD65E5RJM6 399 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 J3QW42 95 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 PPIHO43447 177 aaKnown RBP8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 CD5LO43866 347 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 IGHV1-46P01743 117 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 LYNP07948 512 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 RAC2P15153 192 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 COL8A2P25067 703 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 NR4A2P43354 598 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 GPR6P46095 362 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 MMP15P51511 669 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 GRB2P62993 217 aaKnown RBP8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 TNFAIP6P98066 277 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 PCK2Q16822 640 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 TMEM255AQ5JRV8 349 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 C12orf73Q69YU5 71 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 DRAM2Q6UX65 266 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 FBXW12Q6X9E4 464 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 PQLC1Q8N2U9 271 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 CBR4Q8N4T8 237 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 TMEM163Q8TC26 289 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 ST7LQ8TDW4 575 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 EME1Q96AY2 570 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 ELMOD3Q96FG2 381 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 ZNF582Q96NG8 517 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 TEAD3Q99594 435 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 KCNJ15Q99712 375 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 C9orf16Q9BUW7 83 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 TTTY10Q9BZA0 68 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 NARFLQ9H6Q4 476 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 MARCH7Q9H992 704 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 CHODLQ9H9P2 273 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 IMPAD1Q9NX62 359 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 NKIRAS2Q9NYR9 191 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 TREM2Q9NZC2 230 aa8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 CGGBP1Q9UFW8 167 aaPredicted RBP8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.86□□□□□ -0.99
TRAPPC12-222ENST00000493792 IGHV4-61A0A0C4DH41 118 aa8.85□□□□□ -0.99
TRAPPC12-222ENST00000493792 CCDC182A6NF36 153 aa8.85□□□□□ -0.99
TRAPPC12-222ENST00000493792 GGT3PA6NGU5 568 aa8.85□□□□□ -0.99
TRAPPC12-222ENST00000493792 SELEP16581 610 aa8.85□□□□□ -0.99
TRAPPC12-222ENST00000493792 KITLGP21583 273 aa8.85□□□□□ -0.99
TRAPPC12-222ENST00000493792 ACHEP22303 614 aa8.85□□□□□ -0.99
TRAPPC12-222ENST00000493792 SLC2A5P22732 501 aa8.85□□□□□ -0.99
TRAPPC12-222ENST00000493792 CX3CR1P49238 355 aa8.85□□□□□ -0.99
TRAPPC12-222ENST00000493792 HCCSP53701 268 aa8.85□□□□□ -0.99
TRAPPC12-222ENST00000493792 CDC42P60953 191 aa8.85□□□□□ -0.99
TRAPPC12-222ENST00000493792 LOXL1Q08397 574 aaPredicted RBP8.85□□□□□ -0.99
TRAPPC12-222ENST00000493792 ZSCAN26Q16670 478 aa8.85□□□□□ -0.99
TRAPPC12-222ENST00000493792 HFEQ30201 348 aa8.85□□□□□ -0.99
TRAPPC12-222ENST00000493792 GFOD2Q3B7J2 385 aa8.85□□□□□ -0.99
TRAPPC12-222ENST00000493792 KRTAP27-1Q3LI81 207 aa8.85□□□□□ -0.99
TRAPPC12-222ENST00000493792 CHRFAM7AQ494W8 412 aa8.85□□□□□ -0.99
TRAPPC12-222ENST00000493792 FAM209AQ5JX71 171 aa8.85□□□□□ -0.99
TRAPPC12-222ENST00000493792 COLCA1Q6ZS62 124 aa8.85□□□□□ -0.99
TRAPPC12-222ENST00000493792 ZBTB49Q6ZSB9 765 aa8.85□□□□□ -0.99
TRAPPC12-222ENST00000493792 FAM57BQ71RH2 274 aa8.85□□□□□ -0.99
TRAPPC12-222ENST00000493792 PGAP1Q75T13 922 aa8.85□□□□□ -0.99
TRAPPC12-222ENST00000493792 MEPCEQ7L2J0 689 aaKnown RBP8.85□□□□□ -0.99
TRAPPC12-222ENST00000493792 SLC16A9Q7RTY1 509 aa8.85□□□□□ -0.99
TRAPPC12-222ENST00000493792 KRT77Q7Z794 578 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms