RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 ZNF391Q9UJN7 358 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 R4GMQ9 66 aa10.77□□□□□ -0.69
SNX17-208ENST00000493711 ANKRD17O75179 2603 aaKnown RBP10.76□□□□□ -0.69
SNX17-208ENST00000493711 ALPK2Q86TB3 2170 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 TMEM269A0A1B0GVZ9 245 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 H3BSA7 217 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 C19orf84I3L1E1 186 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 ABHD16AO95870 558 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 HTR1AP08908 422 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 RNF224P0DH78 156 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 ZNF35P13682 527 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 CCNOP22674 350 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 CFL1P23528 166 aaKnown RBP10.76□□□□□ -0.69
SNX17-208ENST00000493711 SLC6A9P48067 706 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 TGM4P49221 684 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 CX3CR1P49238 355 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 CCR9P51686 369 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 PRKXP51817 358 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 OR12D2P58182 307 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 BSPH1Q075Z2 132 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 ACSM1Q08AH1 577 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 MALLQ13021 153 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 SPHARQ15513 63 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 TP53I3Q53FA7 332 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 LIPNQ5VXI9 398 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 COLCA1Q6ZS62 124 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 SSX6Q7RTT6 188 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 RFLNBQ8N5W9 214 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 C1QTNF5Q9BXJ0 243 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 OR10A2Q9H208 303 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 RGCCQ9H4X1 137 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 GRIP1Q9Y3R0 1128 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 MYO7BQ6PIF6 2116 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 HIVEP3Q5T1R4 2406 aa10.76□□□□□ -0.69
SNX17-208ENST00000493711 INTS1Q8N201 2190 aaKnown RBP10.76□□□□□ -0.69
SNX17-208ENST00000493711 CREBBPQ92793 2442 aa10.75□□□□□ -0.69
SNX17-208ENST00000493711 DPRXA6NFQ7 191 aa10.75□□□□□ -0.69
SNX17-208ENST00000493711 LOC110117498-PIK3R3F6TDL0 507 aa10.75□□□□□ -0.69
SNX17-208ENST00000493711 XRCC2O43543 280 aa10.75□□□□□ -0.69
SNX17-208ENST00000493711 CLDN1O95832 211 aa10.75□□□□□ -0.69
SNX17-208ENST00000493711 LCATP04180 440 aa10.75□□□□□ -0.69
SNX17-208ENST00000493711 CELA3BP08861 270 aa10.75□□□□□ -0.69
SNX17-208ENST00000493711 NR4A1P22736 598 aa10.75□□□□□ -0.69
SNX17-208ENST00000493711 UCP2P55851 309 aa10.75□□□□□ -0.69
SNX17-208ENST00000493711 RSPO1Q2MKA7 263 aaPredicted RBP10.75□□□□□ -0.69
SNX17-208ENST00000493711 BCL2L15Q5TBC7 163 aa10.75□□□□□ -0.69
SNX17-208ENST00000493711 SP5Q6BEB4 398 aaPredicted RBP10.75□□□□□ -0.69
SNX17-208ENST00000493711 RPL22L1Q6P5R6 122 aaKnown RBP10.75□□□□□ -0.69
SNX17-208ENST00000493711 ZNF704Q6ZNC4 412 aaPredicted RBP10.75□□□□□ -0.69
SNX17-208ENST00000493711 ZNF367Q7RTV3 350 aa10.75□□□□□ -0.69
SNX17-208ENST00000493711 SPARTQ8N0X7 666 aa10.75□□□□□ -0.69
SNX17-208ENST00000493711 CCDC54Q8NEL0 328 aa10.75□□□□□ -0.69
SNX17-208ENST00000493711 NUP37Q8NFH4 326 aa10.75□□□□□ -0.69
SNX17-208ENST00000493711 SPRYD4Q8WW59 207 aaPredicted RBP10.75□□□□□ -0.69
SNX17-208ENST00000493711 PELI1Q96FA3 418 aa10.75□□□□□ -0.69
SNX17-208ENST00000493711 PLPPR2Q96GM1 343 aa10.75□□□□□ -0.69
SNX17-208ENST00000493711 TTTY10Q9BZA0 68 aa10.75□□□□□ -0.69
SNX17-208ENST00000493711 ACOXLQ9NUZ1 547 aa10.75□□□□□ -0.69
SNX17-208ENST00000493711 NUFIP1Q9UHK0 495 aaKnown RBP10.75□□□□□ -0.69
SNX17-208ENST00000493711 CLEC2DQ9UHP7 191 aa10.75□□□□□ -0.69
SNX17-208ENST00000493711 RNF115Q9Y4L5 304 aa10.75□□□□□ -0.69
SNX17-208ENST00000493711 A0A0U1RQV5 110 aa10.74□□□□□ -0.69
SNX17-208ENST00000493711 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.74□□□□□ -0.69
SNX17-208ENST00000493711 DEFB108AA8MXU0 73 aa10.74□□□□□ -0.69
SNX17-208ENST00000493711 PRR32B1ATL7 298 aa10.74□□□□□ -0.69
SNX17-208ENST00000493711 PSMD9O00233 223 aa10.74□□□□□ -0.69
SNX17-208ENST00000493711 ABCD4O14678 606 aa10.74□□□□□ -0.69
SNX17-208ENST00000493711 RPP14O95059 124 aaKnown RBP10.74□□□□□ -0.69
SNX17-208ENST00000493711 ANXA2P07355 339 aaKnown RBP10.74□□□□□ -0.69
SNX17-208ENST00000493711 DBHP09172 617 aa10.74□□□□□ -0.69
SNX17-208ENST00000493711 CD53P19397 219 aa10.74□□□□□ -0.69
SNX17-208ENST00000493711 ZNF121P58317 390 aaPredicted RBP10.74□□□□□ -0.69
SNX17-208ENST00000493711 EMX1Q04741 257 aaPredicted RBP10.74□□□□□ -0.69
SNX17-208ENST00000493711 GPR50Q13585 617 aa10.74□□□□□ -0.69
SNX17-208ENST00000493711 MED22Q15528 200 aa10.74□□□□□ -0.69
SNX17-208ENST00000493711 OR2G6Q5TZ20 316 aa10.74□□□□□ -0.69
SNX17-208ENST00000493711 SLC22A25Q6T423 547 aa10.74□□□□□ -0.69
SNX17-208ENST00000493711 CATSPERDQ86XM0 798 aa10.74□□□□□ -0.69
SNX17-208ENST00000493711 ZNF485Q8NCK3 441 aa10.74□□□□□ -0.69
SNX17-208ENST00000493711 GATAD2BQ8WXI9 593 aa10.74□□□□□ -0.69
SNX17-208ENST00000493711 SLC7A6Q92536 515 aa10.74□□□□□ -0.69
SNX17-208ENST00000493711 SGCDQ92629 289 aa10.74□□□□□ -0.69
SNX17-208ENST00000493711 AKAP1Q92667 903 aaKnown RBP eCLIP10.74□□□□□ -0.69
SNX17-208ENST00000493711 RORBQ92753 470 aa10.74□□□□□ -0.69
SNX17-208ENST00000493711 PGAM5Q96HS1 289 aa10.74□□□□□ -0.69
SNX17-208ENST00000493711 PBOV1Q9GZY1 135 aa10.74□□□□□ -0.69
SNX17-208ENST00000493711 ISG20L2Q9H9L3 353 aaKnown RBP10.74□□□□□ -0.69
SNX17-208ENST00000493711 ACOT13Q9NPJ3 140 aa10.74□□□□□ -0.69
SNX17-208ENST00000493711 FAM206AQ9NX38 181 aa10.74□□□□□ -0.69
SNX17-208ENST00000493711 OR52A1Q9UKL2 312 aa10.74□□□□□ -0.69
SNX17-208ENST00000493711 LSM2Q9Y333 95 aaKnown RBP10.74□□□□□ -0.69
SNX17-208ENST00000493711 TRIM64CA6NLI5 447 aa10.73□□□□□ -0.69
SNX17-208ENST00000493711 TMEM212A6NML5 194 aa10.73□□□□□ -0.69
SNX17-208ENST00000493711 A6NNC1 897 aa10.73□□□□□ -0.69
SNX17-208ENST00000493711 MAGEB4O15481 346 aaPredicted RBP10.73□□□□□ -0.69
SNX17-208ENST00000493711 GPRIN2O60269 458 aa10.73□□□□□ -0.69
SNX17-208ENST00000493711 SMPD2O60906 423 aa10.73□□□□□ -0.69
SNX17-208ENST00000493711 SRSF10O75494 262 aaKnown RBP10.73□□□□□ -0.69
SNX17-208ENST00000493711 CD1AP06126 327 aa10.73□□□□□ -0.69
SNX17-208ENST00000493711 ADRA2AP08913 450 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms