RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 RNF24Q9Y225 148 aa18.26■□□□□ 0.51
RNF40-203ENST00000493683 C4AP0C0L4 1744 aa18.26■□□□□ 0.51
RNF40-203ENST00000493683 CRYM-AS1A6NIL9 109 aa18.26■□□□□ 0.51
RNF40-203ENST00000493683 IDSB3KWA1 339 aa18.26■□□□□ 0.51
RNF40-203ENST00000493683 K7ESM1 405 aa18.26■□□□□ 0.51
RNF40-203ENST00000493683 TERTO14746 1132 aaKnown RBP18.26■□□□□ 0.51
RNF40-203ENST00000493683 B3GALT4O96024 378 aa18.26■□□□□ 0.51
RNF40-203ENST00000493683 RPA2P15927 270 aa18.26■□□□□ 0.51
RNF40-203ENST00000493683 SNRPNP63162 240 aaKnown RBP18.26■□□□□ 0.51
RNF40-203ENST00000493683 ERHP84090 104 aaKnown RBP18.26■□□□□ 0.51
RNF40-203ENST00000493683 SIGLECL1Q8N7X8 197 aa18.26■□□□□ 0.51
RNF40-203ENST00000493683 CXorf58Q96LI9 332 aa18.26■□□□□ 0.51
RNF40-203ENST00000493683 C12orf49Q9H741 205 aa18.26■□□□□ 0.51
RNF40-203ENST00000493683 SLC17A4Q9Y2C5 497 aa18.26■□□□□ 0.51
RNF40-203ENST00000493683 ANKRD12Q6UB98 2062 aa18.26■□□□□ 0.51
RNF40-203ENST00000493683 LINC01553A4QN01 128 aa18.26■□□□□ 0.51
RNF40-203ENST00000493683 LRP3O75074 770 aa18.26■□□□□ 0.51
RNF40-203ENST00000493683 CD3DP04234 171 aa18.26■□□□□ 0.51
RNF40-203ENST00000493683 RAB5AP20339 215 aa18.26■□□□□ 0.51
RNF40-203ENST00000493683 HAGHQ16775 308 aa18.26■□□□□ 0.51
RNF40-203ENST00000493683 TSEN54Q7Z6J9 526 aaKnown RBP18.26■□□□□ 0.51
RNF40-203ENST00000493683 THOC3Q96J01 351 aaKnown RBP18.26■□□□□ 0.51
RNF40-203ENST00000493683 HDGFL3Q9Y3E1 203 aa18.26■□□□□ 0.51
RNF40-203ENST00000493683 MYO10Q9HD67 2058 aa18.25■□□□□ 0.51
RNF40-203ENST00000493683 SSSCA1O60232 199 aa18.25■□□□□ 0.51
RNF40-203ENST00000493683 LY86O95711 162 aa18.25■□□□□ 0.51
RNF40-203ENST00000493683 IGFBP1P08833 259 aaPredicted RBP18.25■□□□□ 0.51
RNF40-203ENST00000493683 SLC38A6Q8IZM9 456 aa18.25■□□□□ 0.51
RNF40-203ENST00000493683 NT5CQ8TCD5 201 aa18.25■□□□□ 0.51
RNF40-203ENST00000493683 EDARADDQ8WWZ3 215 aa18.25■□□□□ 0.51
RNF40-203ENST00000493683 UPK1AO00322 258 aa18.25■□□□□ 0.51
RNF40-203ENST00000493683 EPXP11678 715 aa18.25■□□□□ 0.51
RNF40-203ENST00000493683 NDUFB7P17568 137 aa18.25■□□□□ 0.51
RNF40-203ENST00000493683 P2RX3P56373 397 aa18.25■□□□□ 0.51
RNF40-203ENST00000493683 SUCNR1Q9BXA5 334 aa18.25■□□□□ 0.51
RNF40-203ENST00000493683 LIMS3P0CW19 117 aa18.25■□□□□ 0.51
RNF40-203ENST00000493683 LIMS4P0CW20 117 aa18.25■□□□□ 0.51
RNF40-203ENST00000493683 MRPL58Q14197 206 aaKnown RBP18.25■□□□□ 0.51
RNF40-203ENST00000493683 CDONQ4KMG0 1287 aa18.25■□□□□ 0.51
RNF40-203ENST00000493683 RPL7L1Q6DKI1 246 aaKnown RBP18.25■□□□□ 0.51
RNF40-203ENST00000493683 SH2D5Q6ZV89 423 aa18.25■□□□□ 0.51
RNF40-203ENST00000493683 OR5AP2Q8NGF4 316 aa18.25■□□□□ 0.51
RNF40-203ENST00000493683 FAM122AQ96E09 287 aa18.25■□□□□ 0.51
RNF40-203ENST00000493683 CABLES2Q9BTV7 478 aa18.25■□□□□ 0.51
RNF40-203ENST00000493683 RGPD1P0DJD0 1748 aa18.25■□□□□ 0.51
RNF40-203ENST00000493683 MYH4Q9Y623 1939 aa18.25■□□□□ 0.51
RNF40-203ENST00000493683 HRH1P35367 487 aa18.25■□□□□ 0.51
RNF40-203ENST00000493683 KIAA1456Q9P272 454 aa18.25■□□□□ 0.51
RNF40-203ENST00000493683 OR2G2Q8NGZ5 317 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 ST8SIA2Q92186 375 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 TTC9Q92623 222 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 PLA2G12AQ9BZM1 189 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 V9GYS6 101 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 ARPC3O15145 178 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 CAPZBP47756 277 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 CLN3Q13286 438 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 ZDHHC23Q8IYP9 409 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 SPNS1Q9H2V7 528 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 RGPD5Q99666 1765 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 FXYD1O00168 92 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 RRASP10301 218 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 THBS4P35443 961 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 UBE2MP61081 183 aaKnown RBP18.24■□□□□ 0.51
RNF40-203ENST00000493683 CCDC190Q86UF4 302 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 C16orf52Q8NHV5 167 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 TMPRSS5Q9H3S3 457 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 OR51B4Q9Y5P0 310 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 G3V3Q6 166 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 FCMRO60667 390 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 ICOSLGO75144 302 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 HTRA4P83105 476 aaPredicted RBP18.24■□□□□ 0.51
RNF40-203ENST00000493683 LCN15Q6UWW0 184 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 C19orf35Q6ZS72 473 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 KLHDC1Q8N7A1 406 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 BHLHE23Q8NDY6 225 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 PINX1Q96BK5 328 aaKnown RBP18.24■□□□□ 0.51
RNF40-203ENST00000493683 TVP23CQ96ET8 276 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 SMIM7Q9BQ49 75 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 PTDSS2Q9BVG9 487 aa18.24■□□□□ 0.51
RNF40-203ENST00000493683 CYC1P08574 325 aa18.23■□□□□ 0.51
RNF40-203ENST00000493683 APEHP13798 732 aaKnown RBP18.23■□□□□ 0.51
RNF40-203ENST00000493683 FBXW5Q969U6 566 aa18.23■□□□□ 0.51
RNF40-203ENST00000493683 PSENENQ9NZ42 101 aa18.23■□□□□ 0.51
RNF40-203ENST00000493683 PPP1R3CQ9UQK1 317 aa18.23■□□□□ 0.51
RNF40-203ENST00000493683 SLC17A2O00624 439 aa18.23■□□□□ 0.51
RNF40-203ENST00000493683 CALCRP30988 508 aa18.23■□□□□ 0.51
RNF40-203ENST00000493683 ZNF468Q5VIY5 522 aaPredicted RBP18.23■□□□□ 0.51
RNF40-203ENST00000493683 PP6455Q8WZ26 134 aa18.23■□□□□ 0.51
RNF40-203ENST00000493683 CHST6Q9GZX3 395 aa18.23■□□□□ 0.51
RNF40-203ENST00000493683 H0Y8G0 127 aa18.23■□□□□ 0.51
RNF40-203ENST00000493683 TMEM128Q5BJH2 165 aa18.23■□□□□ 0.51
RNF40-203ENST00000493683 NUDCD2Q8WVJ2 157 aa18.23■□□□□ 0.51
RNF40-203ENST00000493683 CCDC74AQ96AQ1 378 aa18.23■□□□□ 0.51
RNF40-203ENST00000493683 SARAFQ96BY9 339 aa18.23■□□□□ 0.51
RNF40-203ENST00000493683 WDR1O75083 606 aa18.22■□□□□ 0.51
RNF40-203ENST00000493683 C12orf73Q69YU5 71 aa18.22■□□□□ 0.51
RNF40-203ENST00000493683 TMEM123Q8N131 208 aa18.22■□□□□ 0.51
RNF40-203ENST00000493683 AQP7O14520 342 aa18.22■□□□□ 0.51
RNF40-203ENST00000493683 FBP1P09467 338 aa18.22■□□□□ 0.51
RNF40-203ENST00000493683 GLRA1P23415 457 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms