RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 CLIC3O95833 236 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 CLPTM1O96005 669 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 LCATP04180 440 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 H2BFMP0C1H6 154 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 ATP6V1E1P36543 226 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 MPV17P39210 176 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 CX3CR1P49238 355 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 PPOXP50336 477 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 NUDT6P53370 316 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 HCCSP53701 268 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 IL5RAQ01344 420 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 POU4F2Q12837 409 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 MAD2L1BPQ15013 274 aaPredicted RBP9.93□□□□□ -0.82
CTSA-209ENST00000493522 SWI5Q1ZZU3 235 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 MST1LQ2TV78 715 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 ALKBH6Q3KRA9 238 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 KRTAP27-1Q3LI81 207 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 MEDAGQ5VYS4 303 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 TTC23Q5W5X9 447 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 LRRN1Q6UXK5 716 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 KRT77Q7Z794 578 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 C1orf174Q8IYL3 243 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 RFLNBQ8N5W9 214 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 SETD9Q8NE22 299 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 OR5L1Q8NGL2 311 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 SNX33Q8WV41 574 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 RNF133Q8WVZ7 376 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 NRG4Q8WWG1 115 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 MARS2Q96GW9 593 aaKnown RBP9.93□□□□□ -0.82
CTSA-209ENST00000493522 COG8Q96MW5 612 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 DOK1Q99704 481 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 KCNJ15Q99712 375 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 VRK1Q99986 396 aaPredicted RBP9.93□□□□□ -0.82
CTSA-209ENST00000493522 VCX3BQ9H321 246 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 CLN6Q9NWW5 311 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.93□□□□□ -0.82
CTSA-209ENST00000493522 COPS3Q9UNS2 423 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 N6AMT1Q9Y5N5 214 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 TMEM14AQ9Y6G1 99 aa9.93□□□□□ -0.82
CTSA-209ENST00000493522 TMEM129A0AVI4 362 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 SNTNA6NMZ2 147 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 ZNF670-ZNF695F2Z2N8 137 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 H3BSA7 217 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 H7C417 338 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 ANXA2P07355 339 aaKnown RBP9.92□□□□□ -0.82
CTSA-209ENST00000493522 SBK2P0C263 348 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 SLC2A1P11166 492 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 ZNF250P15622 560 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 ALOX5APP20292 161 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 CAPGP40121 348 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 OPRL1P41146 370 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 ALDH3B1P43353 468 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 TMED1Q13445 227 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 TNK1Q13470 666 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 OCLNQ16625 522 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 CLEC12BQ2HXU8 276 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 RSPO1Q2MKA7 263 aaPredicted RBP9.92□□□□□ -0.82
CTSA-209ENST00000493522 ZNF691Q5VV52 312 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 KCTD18Q6PI47 426 aaPredicted RBP9.92□□□□□ -0.82
CTSA-209ENST00000493522 DRAM2Q6UX65 266 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.92□□□□□ -0.82
CTSA-209ENST00000493522 OR10H4Q8NGA5 316 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 KLF14Q8TD94 323 aaPredicted RBP9.92□□□□□ -0.82
CTSA-209ENST00000493522 RNFT2Q96EX2 444 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 Q96MT0 163 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 MNTQ99583 582 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 TBX5Q99593 518 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 TPK1Q9H3S4 243 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 HAO2Q9NYQ3 351 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 TAAR3PQ9P1P4 343 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 FBXO9Q9UK97 447 aaPredicted RBP9.92□□□□□ -0.82
CTSA-209ENST00000493522 IKZF2Q9UKS7 526 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 STARD10Q9Y365 291 aa9.92□□□□□ -0.82
CTSA-209ENST00000493522 IGLV3-9A0A075B6K5 115 aa9.91□□□□□ -0.82
CTSA-209ENST00000493522 RNF212BA8MTL3 300 aa9.91□□□□□ -0.82
CTSA-209ENST00000493522 RNF223E7ERA6 249 aa9.91□□□□□ -0.82
CTSA-209ENST00000493522 PSMD9O00233 223 aa9.91□□□□□ -0.82
CTSA-209ENST00000493522 PHYHO14832 338 aa9.91□□□□□ -0.82
CTSA-209ENST00000493522 TBX1O43435 398 aa9.91□□□□□ -0.82
CTSA-209ENST00000493522 RRP9O43818 475 aaKnown RBP9.91□□□□□ -0.82
CTSA-209ENST00000493522 TIMM8AO60220 97 aaPredicted RBP9.91□□□□□ -0.82
CTSA-209ENST00000493522 NDUFS7O75251 213 aa9.91□□□□□ -0.82
CTSA-209ENST00000493522 IFNA2P01563 188 aa9.91□□□□□ -0.82
CTSA-209ENST00000493522 IGHV4-39P01824 125 aa9.91□□□□□ -0.82
CTSA-209ENST00000493522 APOC1P02654 83 aa9.91□□□□□ -0.82
CTSA-209ENST00000493522 ERCC1P07992 297 aaPredicted RBP9.91□□□□□ -0.82
CTSA-209ENST00000493522 ADRA2AP08913 450 aa9.91□□□□□ -0.82
CTSA-209ENST00000493522 GABRB1P18505 474 aa9.91□□□□□ -0.82
CTSA-209ENST00000493522 OTX1P32242 354 aaPredicted RBP9.91□□□□□ -0.82
CTSA-209ENST00000493522 MTNR1AP48039 350 aa9.91□□□□□ -0.82
CTSA-209ENST00000493522 EVX1P49640 407 aa9.91□□□□□ -0.82
CTSA-209ENST00000493522 AQP4P55087 323 aa9.91□□□□□ -0.82
CTSA-209ENST00000493522 PSMA6P60900 246 aaKnown RBP9.91□□□□□ -0.82
CTSA-209ENST00000493522 CXCR4P61073 352 aa9.91□□□□□ -0.82
CTSA-209ENST00000493522 ADARB1P78563 741 aaKnown RBP9.91□□□□□ -0.82
CTSA-209ENST00000493522 ZNF91Q05481 1191 aa9.91□□□□□ -0.82
CTSA-209ENST00000493522 KRTAP1-1Q07627 177 aa9.91□□□□□ -0.82
CTSA-209ENST00000493522 MALLQ13021 153 aa9.91□□□□□ -0.82
CTSA-209ENST00000493522 IL18R1Q13478 541 aa9.91□□□□□ -0.82
CTSA-209ENST00000493522 RIPK1Q13546 671 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms