RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 EMC8O43402 210 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 HCN1O60741 890 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 SCN2BO60939 215 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 RAD51DO75771 328 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 UGT2B17O75795 530 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 GOSR1O95249 250 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 OPN1SWP03999 348 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 BCHEP06276 602 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 SOD3P08294 240 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 LINGO3P0C6S8 592 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 POU2F1P14859 743 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 CPT2P23786 658 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 PTAFRP25105 342 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 AQP1P29972 269 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 SRD5A2P31213 254 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 HPDP32754 393 aaPredicted RBP2.41□□□□□ -2.02
PTCD3-218ENST00000493430 ATP6V1E1P36543 226 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 HPCAL1P37235 193 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 FRKP42685 505 aaPredicted RBP2.41□□□□□ -2.02
PTCD3-218ENST00000493430 SLC1A6P48664 564 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 ZNF83P51522 516 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 PNLIPRP2P54317 469 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 PKNOX1P55347 436 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 DNAJB13P59910 316 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 ABCE1P61221 599 aaKnown RBP2.41□□□□□ -2.02
PTCD3-218ENST00000493430 ZNF415Q09FC8 603 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 SKP2Q13309 424 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 RCAN2Q14206 197 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 QPRTQ15274 297 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 STK11Q15831 433 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 SGCBQ16585 318 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 TMEM176BQ3YBM2 270 aaPredicted RBP2.41□□□□□ -2.02
PTCD3-218ENST00000493430 FAM174BQ3ZCQ3 159 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 GLYR1Q49A26 553 aaPredicted RBP2.41□□□□□ -2.02
PTCD3-218ENST00000493430 PHYHD1Q5SRE7 291 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 STAC2Q6ZMT1 411 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 CHMP1BQ7LBR1 199 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 PAGE2Q7Z2X7 111 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 NUP54Q7Z3B4 507 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 NUDCD3Q8IVD9 361 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 SLC22A9Q8IVM8 553 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 TUSC5Q8IXB3 177 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 MSRB3Q8IXL7 192 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 RIMKLAQ8IXN7 391 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 ARIH2OSQ8N7S6 290 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 OR7G1Q8NGA0 311 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 OR52E4Q8NGH9 312 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 OR4D11Q8NGI4 311 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 OR2V1Q8NHB1 315 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 SETD6Q8TBK2 473 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 C14orf79Q96F83 325 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 ALKBH3Q96Q83 286 aaPredicted RBP2.41□□□□□ -2.02
PTCD3-218ENST00000493430 OR5B2Q96R09 309 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 SDF2Q99470 211 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 CCT7Q99832 543 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 PELOQ9BRX2 385 aaKnown RBP2.41□□□□□ -2.02
PTCD3-218ENST00000493430 SLC39A3Q9BRY0 314 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 THUMPD3Q9BV44 507 aaKnown RBP2.41□□□□□ -2.02
PTCD3-218ENST00000493430 CCDC106Q9BWC9 280 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 TBL1XR1Q9BZK7 514 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 IQCGQ9H095 443 aaKnown RBP2.41□□□□□ -2.02
PTCD3-218ENST00000493430 MS4A12Q9NXJ0 267 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 AHSPQ9NZD4 102 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 B4GALT7Q9UBV7 327 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 DCDC2Q9UHG0 476 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 STK38LQ9Y2H1 464 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 ZFHX3Q15911 3703 aa2.41□□□□□ -2.02
PTCD3-218ENST00000493430 SHISA9B4DS77 424 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 E9PBE3 544 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 LYNX1G3V0Z9 82 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 SLC28A1O00337 649 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 HMGN4O00479 90 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 ACOX3O15254 700 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 RGS16O15492 202 aaPredicted RBP2.4□□□□□ -2.03
PTCD3-218ENST00000493430 TPST1O60507 370 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 GCM2O75603 506 aaPredicted RBP2.4□□□□□ -2.03
PTCD3-218ENST00000493430 AKR7A3O95154 331 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 RCBTB2O95199 551 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 ACTL6AO96019 429 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 ALOX5P09917 674 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 NUDT17P0C025 328 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 LYNX1P0DP58 116 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 PRPS2P11908 318 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 CD99P14209 185 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 RPL35AP18077 110 aaKnown RBP2.4□□□□□ -2.03
PTCD3-218ENST00000493430 FUT1P19526 365 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 IGHV1-2P23083 117 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 HTR2AP28223 471 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 UGT2B10P36537 528 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 ACVR1BP36896 505 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 CD79BP40259 229 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 ASMTP46597 345 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 CCT3P49368 545 aaKnown RBP2.4□□□□□ -2.03
PTCD3-218ENST00000493430 TMED10P49755 219 aaKnown RBP2.4□□□□□ -2.03
PTCD3-218ENST00000493430 ALDH3A2P51648 485 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 MAGOHP61326 146 aaKnown RBP2.4□□□□□ -2.03
PTCD3-218ENST00000493430 BSPH1Q075Z2 132 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 MERTKQ12866 999 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 CAPRIN1Q14444 709 aaKnown RBP2.4□□□□□ -2.03
PTCD3-218ENST00000493430 HEPACAMQ14CZ8 416 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms