RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 SHEQ5VZ18 495 aa11.62□□□□□ -0.55
MSH6-208ENST00000493177 DEGS2Q6QHC5 323 aa11.62□□□□□ -0.55
MSH6-208ENST00000493177 KCTD20Q7Z5Y7 419 aa11.62□□□□□ -0.55
MSH6-208ENST00000493177 KLBQ86Z14 1044 aa11.62□□□□□ -0.55
MSH6-208ENST00000493177 ZNF584Q8IVC4 421 aa11.62□□□□□ -0.55
MSH6-208ENST00000493177 SYS1Q8N2H4 156 aa11.62□□□□□ -0.55
MSH6-208ENST00000493177 PIAS4Q8N2W9 510 aaPredicted RBP11.62□□□□□ -0.55
MSH6-208ENST00000493177 OR1J2Q8NGS2 313 aa11.62□□□□□ -0.55
MSH6-208ENST00000493177 OR52N1Q8NH53 320 aa11.62□□□□□ -0.55
MSH6-208ENST00000493177 FBXW5Q969U6 566 aa11.62□□□□□ -0.55
MSH6-208ENST00000493177 SIGLEC11Q96RL6 698 aa11.62□□□□□ -0.55
MSH6-208ENST00000493177 ZNF649Q9BS31 505 aa11.62□□□□□ -0.55
MSH6-208ENST00000493177 CXorf56Q9H5V9 222 aa11.62□□□□□ -0.55
MSH6-208ENST00000493177 VCX3AQ9NNX9 186 aa11.62□□□□□ -0.55
MSH6-208ENST00000493177 BRD7Q9NPI1 651 aa11.62□□□□□ -0.55
MSH6-208ENST00000493177 NPAP1Q9NZP6 1156 aa11.62□□□□□ -0.55
MSH6-208ENST00000493177 CRNNQ9UBG3 495 aaPredicted RBP11.62□□□□□ -0.55
MSH6-208ENST00000493177 POU2F3Q9UKI9 436 aa11.62□□□□□ -0.55
MSH6-208ENST00000493177 PRRC2AP48634 2157 aaKnown RBP11.62□□□□□ -0.55
MSH6-208ENST00000493177 POLQO75417 2590 aa11.62□□□□□ -0.55
MSH6-208ENST00000493177 IGHV1-18A0A0C4DH31 117 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 TRIM64A6NGJ6 449 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 M0R135 149 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 HS3ST1O14792 307 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 IGKV3-15P01624 115 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 APOC1P02654 83 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 CECR9P0C854 216 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 HSMCR30P0CW71 290 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 EMX1Q04741 257 aaPredicted RBP11.61□□□□□ -0.55
MSH6-208ENST00000493177 BSPH1Q075Z2 132 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 TBCEQ15813 527 aaPredicted RBP11.61□□□□□ -0.55
MSH6-208ENST00000493177 ZNF829Q3KNS6 432 aaPredicted RBP11.61□□□□□ -0.55
MSH6-208ENST00000493177 ZNF684Q5T5D7 378 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 LIPNQ5VXI9 398 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 ADAM5Q6NVV9 412 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 KCTD8Q6ZWB6 473 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 RHOUQ7L0Q8 258 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 MYPOPQ86VE0 399 aaPredicted RBP11.61□□□□□ -0.55
MSH6-208ENST00000493177 FAM169BQ8N8A8 192 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 WFDC11Q8NEX6 87 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 ZNF799Q96GE5 643 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 ZNF75AQ96N20 296 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 OR5M11Q96RB7 305 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 KCNS3Q9BQ31 491 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 NIPAL2Q9H841 368 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 ACOT13Q9NPJ3 140 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 ATPIF1Q9UII2 106 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 GRIP1Q9Y3R0 1128 aa11.61□□□□□ -0.55
MSH6-208ENST00000493177 LOC100509620A0A075B734 347 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 LOC110117498-PIK3R3F6TDL0 507 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 ABHD16AO95870 558 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 IGLV1-44P01699 117 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 LCKP06239 509 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 SLC2A1P11166 492 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 ZNF121P58317 390 aaPredicted RBP11.6□□□□□ -0.55
MSH6-208ENST00000493177 SPHARQ15513 63 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 NEDD8Q15843 81 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 ZNF544Q6NX49 715 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 TMEM108Q6UXF1 575 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 ZNF367Q7RTV3 350 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 LRRC75A-AS1Q8N1F1 130 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 ZNF611Q8N823 705 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 KBTBD8Q8NFY9 601 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 RORBQ92753 470 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 PELI1Q96FA3 418 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 PGAM5Q96HS1 289 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 POM121L2Q96KW2 1035 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 DCLRE1CQ96SD1 692 aaKnown RBP11.6□□□□□ -0.55
MSH6-208ENST00000493177 DOK1Q99704 481 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 TMUB1Q9BVT8 246 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 MRPS26Q9BYN8 205 aaKnown RBP11.6□□□□□ -0.55
MSH6-208ENST00000493177 TRIM36Q9NQ86 728 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 BABAM2Q9NXR7 383 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 EIF3KQ9UBQ5 218 aaKnown RBP11.6□□□□□ -0.55
MSH6-208ENST00000493177 LAMP3Q9UQV4 416 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 R4GMQ9 66 aa11.6□□□□□ -0.55
MSH6-208ENST00000493177 TMEM269A0A1B0GVZ9 245 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 ABCD4O14678 606 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 TBX1O43435 398 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 LCATP04180 440 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 ACSM4P0C7M7 580 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 SMIM18P0DKX4 95 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 PCMT1P22061 227 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 PSMB9P28065 219 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 DCTDP32321 178 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 GTF2A1P52655 376 aaPredicted RBP11.59□□□□□ -0.55
MSH6-208ENST00000493177 PSMA6P60900 246 aaKnown RBP11.59□□□□□ -0.55
MSH6-208ENST00000493177 NAAAQ02083 359 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 MFGE8Q08431 387 aaPredicted RBP11.59□□□□□ -0.55
MSH6-208ENST00000493177 MRPL28Q13084 256 aaKnown RBP11.59□□□□□ -0.55
MSH6-208ENST00000493177 C3orf36Q3SXR2 165 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 ARL9Q6T311 187 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 DRAM2Q6UX65 266 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 FAM57BQ71RH2 274 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 EGFL6Q8IUX8 553 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 PAQR4Q8N4S7 273 aaPredicted RBP11.59□□□□□ -0.55
MSH6-208ENST00000493177 ZFP41Q8N8Y5 198 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 IL17RDQ8NFM7 739 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 HAVCR2Q8TDQ0 301 aa11.59□□□□□ -0.55
MSH6-208ENST00000493177 FCGR1BQ92637 280 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms