RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 ZDHHC11Q9H8X9 412 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 NPAP1Q9NZP6 1156 aa12.35□□□□□ -0.43
PTPN7-216ENST00000492977 FAM240BA0A1B0GVZ2 78 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 LMX1BO60663 402 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 ITGB2P05107 769 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 FAM157BP0CG42 384 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 CPN1P15169 458 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 CDK2P24941 298 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 HTR2CP28335 458 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 BDKRB2P30411 391 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 GNALP38405 381 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 PTH2RP49190 550 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 POU3F4P49335 361 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 PCBD1P61457 104 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 DGCR2P98153 550 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 SPOCK1Q08629 439 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 RAB35Q15286 201 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 RNPS1Q15287 305 aaKnown RBP12.34□□□□□ -0.43
PTPN7-216ENST00000492977 SWI5Q1ZZU3 235 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 CEACAM16Q2WEN9 425 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 C2orf76Q3KRA6 126 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 SLC36A2Q495M3 483 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 C4orf48Q5BLP8 95 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 TMEM69Q5SWH9 247 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 GLYATL3Q5SZD4 288 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 ZNF529Q6P280 563 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 ANKRD16Q6P6B7 361 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 PLET1Q6UQ28 207 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 ZNF813Q6ZN06 617 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 FAM57BQ71RH2 274 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 DOK3Q7L591 496 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 LINGO2Q7L985 606 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 CHMP1BQ7LBR1 199 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 ABHD12BQ7Z5M8 362 aaPredicted RBP12.34□□□□□ -0.43
PTPN7-216ENST00000492977 UBE2J2Q8N2K1 259 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 SPTSSAQ969W0 71 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 PGAM5Q96HS1 289 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 ALKBH3Q96Q83 286 aaPredicted RBP12.34□□□□□ -0.43
PTPN7-216ENST00000492977 FOXB1Q99853 325 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 PRRG4Q9BZD6 226 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 SLCO5A1Q9H2Y9 848 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 LDAHQ9H6V9 325 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 BCO1Q9HAY6 547 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 PLEKHA1Q9HB21 404 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 TMEM138Q9NPI0 162 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 PLEK2Q9NYT0 353 aa12.34□□□□□ -0.43
PTPN7-216ENST00000492977 TRGV5A0A0B4J1U4 118 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 A0A0U1RQV5 110 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 CENPXA8MT69 81 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 GABARAPH6UMI1 98 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 XRCC3O43542 346 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 SGCEO43556 437 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 ERCC1P07992 297 aaPredicted RBP12.33□□□□□ -0.44
PTPN7-216ENST00000492977 SLC2A1P11166 492 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 ZNF20P17024 532 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 RANBP1P43487 201 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 SCRN3Q0VDG4 424 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 GPR176Q14439 515 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 RSPO1Q2MKA7 263 aaPredicted RBP12.33□□□□□ -0.44
PTPN7-216ENST00000492977 AGAP6Q5VW22 663 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 PGAP1Q75T13 922 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 LYPD6Q86Y78 171 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 IZUMO1Q8IYV9 350 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 SLC22A24Q8N4F4 322 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 TOMM5Q8N4H5 51 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 CCDC54Q8NEL0 328 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 OR1M1Q8NGA1 313 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 OR51A2Q8NGJ7 313 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 ADAT3Q96EY9 351 aaPredicted RBP12.33□□□□□ -0.44
PTPN7-216ENST00000492977 SORCS2Q96PQ0 1159 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 C7orf50Q9BRJ6 194 aaKnown RBP12.33□□□□□ -0.44
PTPN7-216ENST00000492977 DEFB127Q9H1M4 99 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 MMP28Q9H239 520 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 RNF121Q9H920 327 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 GPR84Q9NQS5 396 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 DIABLOQ9NR28 239 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 ZNF319Q9P2F9 582 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 TIMM10BQ9Y5J6 103 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 N6AMT1Q9Y5N5 214 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 CACNG2Q9Y698 323 aa12.33□□□□□ -0.44
PTPN7-216ENST00000492977 CNOT1A5YKK6 2376 aaKnown RBP12.32□□□□□ -0.44
PTPN7-216ENST00000492977 DCDC2BA2VCK2 349 aa12.32□□□□□ -0.44
PTPN7-216ENST00000492977 F5H5K5 113 aa12.32□□□□□ -0.44
PTPN7-216ENST00000492977 RPL36A-HNRNPH2H7BZ11 118 aa12.32□□□□□ -0.44
PTPN7-216ENST00000492977 KRT33AO76009 404 aa12.32□□□□□ -0.44
PTPN7-216ENST00000492977 IGLV3-1P01715 115 aa12.32□□□□□ -0.44
PTPN7-216ENST00000492977 CD3GP09693 182 aa12.32□□□□□ -0.44
PTPN7-216ENST00000492977 RAB3AP20336 220 aa12.32□□□□□ -0.44
PTPN7-216ENST00000492977 SLC6A1P30531 599 aa12.32□□□□□ -0.44
PTPN7-216ENST00000492977 DYRK1AQ13627 763 aa12.32□□□□□ -0.44
PTPN7-216ENST00000492977 KRT74Q7RTS7 529 aa12.32□□□□□ -0.44
PTPN7-216ENST00000492977 COMMD2Q86X83 199 aa12.32□□□□□ -0.44
PTPN7-216ENST00000492977 TUSC5Q8IXB3 177 aa12.32□□□□□ -0.44
PTPN7-216ENST00000492977 JAGN1Q8N5M9 183 aa12.32□□□□□ -0.44
PTPN7-216ENST00000492977 FNDC9Q8TBE3 224 aa12.32□□□□□ -0.44
PTPN7-216ENST00000492977 FCAMRQ8WWV6 532 aa12.32□□□□□ -0.44
PTPN7-216ENST00000492977 PTX4Q96A99 478 aa12.32□□□□□ -0.44
PTPN7-216ENST00000492977 ITPKCQ96DU7 683 aa12.32□□□□□ -0.44
PTPN7-216ENST00000492977 UQCC2Q9BRT2 126 aa12.32□□□□□ -0.44
PTPN7-216ENST00000492977 EXO5Q9H790 373 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms