RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 TRAP1Q12931 704 aaKnown RBP7.35□□□□□ -1.23
NUP50-217ENST00000491860 GK3PQ14409 553 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 HLXQ14774 488 aaPredicted RBP7.35□□□□□ -1.23
NUP50-217ENST00000491860 SNCBQ16143 134 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 TUSC1Q2TAM9 212 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 KRTAP27-1Q3LI81 207 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 ZNF404Q494X3 552 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 CD276Q5ZPR3 534 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 SLC18B1Q6NT16 456 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 ZNF620Q6ZNG0 422 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 DCDC5Q6ZRR9 648 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 C9orf139Q6ZV77 190 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 MRPL21Q7Z2W9 205 aaKnown RBP7.35□□□□□ -1.23
NUP50-217ENST00000491860 ZDHHC21Q8IVQ6 265 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 OR5AS1Q8N127 324 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 ARHGAP24Q8N264 748 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 OR4K13Q8NH42 304 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 SPRYD4Q8WW59 207 aaPredicted RBP7.35□□□□□ -1.23
NUP50-217ENST00000491860 RAB40AQ8WXH6 277 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 SLC7A6Q92536 515 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 SLC25A28Q96A46 364 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 TRIM15Q9C019 465 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 MS4A7Q9GZW8 240 aaPredicted RBP7.35□□□□□ -1.23
NUP50-217ENST00000491860 MUC13Q9H3R2 512 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 TMEM165Q9HC07 324 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 CD300AQ9UGN4 299 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 TAGLN3Q9UI15 199 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 PPIAL4AQ9Y536 164 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 CDH10Q9Y6N8 788 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 MGAM2Q2M2H8 2515 aa7.35□□□□□ -1.23
NUP50-217ENST00000491860 IGHV2-70DA0A0C4DH43 119 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.34□□□□□ -1.23
NUP50-217ENST00000491860 POM121CA8CG34 1229 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 F5H5K5 113 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 TRAPPC2LH3BP13 241 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 M0R135 149 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 ARPC2O15144 300 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 DIRAS1O95057 198 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 APOC1P02654 83 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 LCATP04180 440 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 LIPFP07098 398 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 HOXB6P17509 224 aaKnown RBP7.34□□□□□ -1.23
NUP50-217ENST00000491860 GGT2P36268 569 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 DDOSTP39656 456 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 PITPNBP48739 271 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 IL13RA1P78552 427 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 MXRA7P84157 204 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.34□□□□□ -1.23
NUP50-217ENST00000491860 BAMBIQ13145 260 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 GK2Q14410 553 aaPredicted RBP7.34□□□□□ -1.23
NUP50-217ENST00000491860 OR8G1Q15617 311 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 AWAT1Q58HT5 328 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 CORO6Q6QEF8 472 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 SHISA2Q6UWI4 295 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 DRAM2Q6UX65 266 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 ZNF771Q7L3S4 317 aaPredicted RBP7.34□□□□□ -1.23
NUP50-217ENST00000491860 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.34□□□□□ -1.23
NUP50-217ENST00000491860 RNF148Q8N7C7 305 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 ZDHHC22Q8N966 263 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 BHLHE23Q8NDY6 225 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 PROKR2Q8NFJ6 384 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 OR10AD1Q8NGE0 317 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 OR52E2Q8NGJ4 325 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 UPRTQ96BW1 309 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 ZNF799Q96GE5 643 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 TSSK2Q96PF2 358 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 CDRT15Q96T59 188 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 MAGIXQ9H6Y5 334 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 FN3KRPQ9HA64 309 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 C14orf119Q9NWQ9 140 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 IL20Q9NYY1 176 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 MRPL15Q9P015 296 aaKnown RBP7.34□□□□□ -1.23
NUP50-217ENST00000491860 ACTR3BQ9P1U1 418 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 CLN8Q9UBY8 286 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 ARL2BPQ9Y2Y0 163 aa7.34□□□□□ -1.23
NUP50-217ENST00000491860 PKD1L1Q8TDX9 2849 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 TRAV38-1A0A0B4J264 116 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 KIR2DS1A0A191URI9 304 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 A0A1B0GUS0 222 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 OR6C68A6NDL8 312 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 F5H5P2 479 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 TNFRSF11BO00300 401 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 DCTN6O00399 190 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 MLNRO43193 412 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 XRCC2O43543 280 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 ENSAO43768 121 aaKnown RBP7.33□□□□□ -1.24
NUP50-217ENST00000491860 RGS9O75916 674 aaPredicted RBP7.33□□□□□ -1.24
NUP50-217ENST00000491860 CCNB2O95067 398 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 CYB5R3P00387 301 aaPredicted RBP7.33□□□□□ -1.24
NUP50-217ENST00000491860 IFNGP01579 166 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 RNASE1P07998 156 aaKnown RBP7.33□□□□□ -1.24
NUP50-217ENST00000491860 CFL1P23528 166 aaKnown RBP7.33□□□□□ -1.24
NUP50-217ENST00000491860 FMO3P31513 532 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 SLC15A1P46059 708 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 ERFP50548 548 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 GRB2P62993 217 aaKnown RBP7.33□□□□□ -1.24
NUP50-217ENST00000491860 TAF13Q15543 124 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 MEP1BQ16820 701 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 SPRNQ5BIV9 151 aa7.33□□□□□ -1.24
NUP50-217ENST00000491860 GPR157Q5UAW9 335 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms