RNA–Protein interactions for RNA: ENST00000491360.1

ABCB1-208, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 2

Gene ABCB1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-208ENST00000491360 CCL16O15467 120 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 OR2T1O43869 369 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 FARS2O95363 451 aaKnown RBP4.29□□□□□ -1.72
ABCB1-208ENST00000491360 DUS4LO95620 317 aaKnown RBP4.29□□□□□ -1.72
ABCB1-208ENST00000491360 GPR75O95800 540 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 TXNDC12O95881 172 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 CXCL10P02778 98 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 ITGA5P08648 1049 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 FBP1P09467 338 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 SFTA3P0C7M3 94 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 SLC35G6P0C7Q6 338 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 FAM157CP0CG43 387 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 LYL1P12980 280 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 PRF1P14222 555 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 PGAM2P15259 253 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 CSF2RAP15509 400 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 MUC1P15941 1255 aaPredicted RBP4.29□□□□□ -1.72
ABCB1-208ENST00000491360 ZNF14P17017 642 aaPredicted RBP4.29□□□□□ -1.72
ABCB1-208ENST00000491360 RCC1P18754 421 aaPredicted RBP4.29□□□□□ -1.72
ABCB1-208ENST00000491360 NFYBP25208 207 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 HTR2CP28335 458 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 PMELP40967 661 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 CCR2P41597 374 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 CDKN2AP42771 156 aaKnown RBP4.29□□□□□ -1.72
ABCB1-208ENST00000491360 KIR3DL2P43630 455 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 ARRB1P49407 418 aaPredicted RBP4.29□□□□□ -1.72
ABCB1-208ENST00000491360 CSNK1EP49674 416 aaKnown RBP4.29□□□□□ -1.72
ABCB1-208ENST00000491360 CAV2P51636 162 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 STARD6P59095 220 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 CTXN1P60606 82 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 SSTP61278 116 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 ADAM8P78325 824 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 ID2Q02363 134 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 DMWDQ09019 674 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 GPR18Q14330 331 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 ELAVL3Q14576 367 aaKnown RBP4.29□□□□□ -1.72
ABCB1-208ENST00000491360 EXOSC7Q15024 291 aaKnown RBP4.29□□□□□ -1.72
ABCB1-208ENST00000491360 DHCR24Q15392 516 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 OR7A5Q15622 319 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 ZNF141Q15928 474 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 PRICKLE4Q2TBC4 344 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 HNRNPA1L2Q32P51 320 aaKnown RBP4.29□□□□□ -1.72
ABCB1-208ENST00000491360 RNASE10Q5GAN6 216 aaKnown RBP4.29□□□□□ -1.72
ABCB1-208ENST00000491360 FAM76BQ5HYJ3 339 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 WDR38Q5JTN6 314 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 CST9Q5W186 159 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 FCRL6Q6DN72 434 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 RBMS3Q6XE24 437 aaKnown RBP4.29□□□□□ -1.72
ABCB1-208ENST00000491360 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.29□□□□□ -1.72
ABCB1-208ENST00000491360 ANKRD33Q7Z3H0 272 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 VN1R4Q7Z5H5 301 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 ZNF440Q8IYI8 595 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 PRSS35Q8N3Z0 413 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 PAQR4Q8N4S7 273 aaPredicted RBP4.29□□□□□ -1.72
ABCB1-208ENST00000491360 LRRC75AQ8NAA5 344 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 OR4E2Q8NGC2 313 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 OR6N2Q8NGY6 317 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 OR10AC1Q8NH08 325 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 ZCCHC10Q8TBK6 192 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 TMED6Q8WW62 240 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 ASB17Q8WXJ9 295 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 HIST1H2BAQ96A08 127 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 FAM46BQ96A09 425 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 TMEM106AQ96A25 262 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 PTX4Q96A99 478 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 TM4SF19Q96DZ7 209 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 C14orf79Q96F83 325 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 CPNE2Q96FN4 548 aaPredicted RBP4.29□□□□□ -1.72
ABCB1-208ENST00000491360 TMEM41AQ96HV5 264 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 ZC3H10Q96K80 434 aaKnown RBP4.29□□□□□ -1.72
ABCB1-208ENST00000491360 SMIM8Q96KF7 97 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 OR5B2Q96R09 309 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 INTS14Q96SY0 518 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 SLC6A7Q99884 636 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 MICU1Q9BPX6 476 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 LMF2Q9BU23 707 aaKnown RBP4.29□□□□□ -1.72
ABCB1-208ENST00000491360 CST11Q9H112 138 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 SYT4Q9H2B2 425 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 KCNK15Q9H427 330 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 KIR3DX1Q9H7L2 352 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 TUBA4BQ9H853 241 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 RHOFQ9HBH0 211 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 ACKR4Q9NPB9 350 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 CYTL1Q9NRR1 136 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 PHPT1Q9NRX4 125 aaPredicted RBP4.29□□□□□ -1.72
ABCB1-208ENST00000491360 DHCR7Q9UBM7 475 aaKnown RBP4.29□□□□□ -1.72
ABCB1-208ENST00000491360 CKLFQ9UBR5 152 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 LPAR3Q9UBY5 353 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 MIOXQ9UGB7 285 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 SHPKQ9UHJ6 478 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 KLK13Q9UKR3 277 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 DAPP1Q9UN19 280 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 DHDHQ9UQ10 334 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 KCNK6Q9Y257 313 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 FARSAQ9Y285 508 aaKnown RBP4.29□□□□□ -1.72
ABCB1-208ENST00000491360 SLC27A6Q9Y2P4 619 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 CSAG2Q9Y5P2 127 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 WIF1Q9Y5W5 379 aa4.29□□□□□ -1.72
ABCB1-208ENST00000491360 COL5A1P20908 1838 aaPredicted RBP4.29□□□□□ -1.72
ABCB1-208ENST00000491360 PCNX3Q9H6A9 2034 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms