RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 LNX2Q8N448 690 aa15.13■□□□□ 0.01
HMGN1-219ENST00000491183 KLHL36Q8N4N3 616 aa15.13■□□□□ 0.01
HMGN1-219ENST00000491183 SPICQ8N5J4 248 aa15.13■□□□□ 0.01
HMGN1-219ENST00000491183 TEX29Q8N6K0 151 aa15.13■□□□□ 0.01
HMGN1-219ENST00000491183 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.13■□□□□ 0.01
HMGN1-219ENST00000491183 CCDC197Q8NCU1 140 aa15.13■□□□□ 0.01
HMGN1-219ENST00000491183 PROKR2Q8NFJ6 384 aa15.13■□□□□ 0.01
HMGN1-219ENST00000491183 OR9Q1Q8NGQ5 310 aa15.13■□□□□ 0.01
HMGN1-219ENST00000491183 OR2T4Q8NH00 348 aa15.13■□□□□ 0.01
HMGN1-219ENST00000491183 RBM4Q9BWF3 364 aaKnown RBP15.13■□□□□ 0.01
HMGN1-219ENST00000491183 HCAR1Q9BXC0 346 aa15.13■□□□□ 0.01
HMGN1-219ENST00000491183 TAS2R1Q9NYW7 299 aa15.13■□□□□ 0.01
HMGN1-219ENST00000491183 PPIAL4EA0A075B759 164 aa15.12■□□□□ 0.01
HMGN1-219ENST00000491183 PPIAL4CA0A0B4J2A2 164 aa15.12■□□□□ 0.01
HMGN1-219ENST00000491183 C5orf63A6NC05 138 aa15.12■□□□□ 0.01
HMGN1-219ENST00000491183 F5H0A9 414 aaPredicted RBP15.12■□□□□ 0.01
HMGN1-219ENST00000491183 PPIAL4DF5H284 164 aa15.12■□□□□ 0.01
HMGN1-219ENST00000491183 CYB5R3P00387 301 aaPredicted RBP15.12■□□□□ 0.01
HMGN1-219ENST00000491183 FSHBP01225 129 aa15.12■□□□□ 0.01
HMGN1-219ENST00000491183 HLA-DPB1P04440 258 aa15.12■□□□□ 0.01
HMGN1-219ENST00000491183 PPIAL4FP0DN26 164 aa15.12■□□□□ 0.01
HMGN1-219ENST00000491183 CRMP1Q14194 572 aa15.12■□□□□ 0.01
HMGN1-219ENST00000491183 FAM98BQ52LJ0 330 aaKnown RBP15.12■□□□□ 0.01
HMGN1-219ENST00000491183 SLCO4A1Q96BD0 722 aa15.12■□□□□ 0.01
HMGN1-219ENST00000491183 CLPTM1LQ96KA5 538 aa15.12■□□□□ 0.01
HMGN1-219ENST00000491183 DGCR6LQ9BY27 220 aa15.12■□□□□ 0.01
HMGN1-219ENST00000491183 NMNAT2Q9BZQ4 307 aa15.12■□□□□ 0.01
HMGN1-219ENST00000491183 REEP1Q9H902 201 aa15.12■□□□□ 0.01
HMGN1-219ENST00000491183 TMEM165Q9HC07 324 aa15.12■□□□□ 0.01
HMGN1-219ENST00000491183 TBC1D23Q9NUY8 699 aa15.12■□□□□ 0.01
HMGN1-219ENST00000491183 TMEM100Q9NV29 134 aa15.12■□□□□ 0.01
HMGN1-219ENST00000491183 ARMC1Q9NVT9 282 aa15.12■□□□□ 0.01
HMGN1-219ENST00000491183 PRPF19Q9UMS4 504 aaKnown RBP15.12■□□□□ 0.01
HMGN1-219ENST00000491183 POLR3KQ9Y2Y1 108 aaPredicted RBP15.12■□□□□ 0.01
HMGN1-219ENST00000491183 SAMHD1Q9Y3Z3 626 aaKnown RBP15.12■□□□□ 0.01
HMGN1-219ENST00000491183 IFNL4K9M1U5 179 aa15.11■□□□□ 0.01
HMGN1-219ENST00000491183 M0R135 149 aa15.11■□□□□ 0.01
HMGN1-219ENST00000491183 ACOT8O14734 319 aa15.11■□□□□ 0.01
HMGN1-219ENST00000491183 ZNF205O95201 554 aa15.11■□□□□ 0.01
HMGN1-219ENST00000491183 SOX14O95416 240 aa15.11■□□□□ 0.01
HMGN1-219ENST00000491183 GYPBP06028 91 aa15.11■□□□□ 0.01
HMGN1-219ENST00000491183 WNT2P09544 360 aa15.11■□□□□ 0.01
HMGN1-219ENST00000491183 SELEP16581 610 aa15.11■□□□□ 0.01
HMGN1-219ENST00000491183 SRP9P49458 86 aaKnown RBP15.11■□□□□ 0.01
HMGN1-219ENST00000491183 TPTEP56180 551 aa15.11■□□□□ 0.01
HMGN1-219ENST00000491183 SCGB2A2Q13296 93 aa15.11■□□□□ 0.01
HMGN1-219ENST00000491183 MAB21L1Q13394 359 aa15.11■□□□□ 0.01
HMGN1-219ENST00000491183 ZNF511Q8NB15 262 aa15.11■□□□□ 0.01
HMGN1-219ENST00000491183 DEFB108BQ8NET1 73 aa15.11■□□□□ 0.01
HMGN1-219ENST00000491183 NANPQ8TBE9 248 aa15.11■□□□□ 0.01
HMGN1-219ENST00000491183 ZNF418Q8TF45 676 aaPredicted RBP15.11■□□□□ 0.01
HMGN1-219ENST00000491183 ZNF799Q96GE5 643 aa15.11■□□□□ 0.01
HMGN1-219ENST00000491183 DDX28Q9NUL7 540 aaKnown RBP15.11■□□□□ 0.01
HMGN1-219ENST00000491183 COMMD3-BMI1R4GMX3 469 aa15.11■□□□□ 0.01
HMGN1-219ENST00000491183 CEACAM18A8MTB9 384 aa15.1■□□□□ 0.01
HMGN1-219ENST00000491183 CLUP10909 449 aa15.1■□□□□ 0.01
HMGN1-219ENST00000491183 OTX1P32242 354 aaPredicted RBP15.1■□□□□ 0.01
HMGN1-219ENST00000491183 MDH2P40926 338 aaKnown RBP15.1■□□□□ 0.01
HMGN1-219ENST00000491183 SLC25A1P53007 311 aa15.1■□□□□ 0.01
HMGN1-219ENST00000491183 MALLQ13021 153 aa15.1■□□□□ 0.01
HMGN1-219ENST00000491183 PCK2Q16822 640 aa15.1■□□□□ 0.01
HMGN1-219ENST00000491183 SNAI3Q3KNW1 292 aa15.1■□□□□ 0.01
HMGN1-219ENST00000491183 FAM201AQ5SY85 155 aa15.1■□□□□ 0.01
HMGN1-219ENST00000491183 USP43Q70EL4 1123 aa15.1■□□□□ 0.01
HMGN1-219ENST00000491183 DCXRQ7Z4W1 244 aa15.1■□□□□ 0.01
HMGN1-219ENST00000491183 MOGAT3Q86VF5 341 aa15.1■□□□□ 0.01
HMGN1-219ENST00000491183 SPTSSAQ969W0 71 aa15.1■□□□□ 0.01
HMGN1-219ENST00000491183 ASB9Q96DX5 294 aa15.1■□□□□ 0.01
HMGN1-219ENST00000491183 NIPSNAP1Q9BPW8 284 aa15.1■□□□□ 0.01
HMGN1-219ENST00000491183 C1orf21Q9H246 121 aa15.1■□□□□ 0.01
HMGN1-219ENST00000491183 BAIAP2Q9UQB8 552 aa15.1■□□□□ 0.01
HMGN1-219ENST00000491183 A8MXK9 166 aa15.09■□□□□ 0.01
HMGN1-219ENST00000491183 RAP2AP10114 183 aa15.09■□□□□ 0.01
HMGN1-219ENST00000491183 ZNF12P17014 697 aa15.09■□□□□ 0.01
HMGN1-219ENST00000491183 SPI1P17947 270 aa15.09■□□□□ 0.01
HMGN1-219ENST00000491183 FMO3P31513 532 aa15.09■□□□□ 0.01
HMGN1-219ENST00000491183 HILS1P60008 231 aa15.09■□□□□ 0.01
HMGN1-219ENST00000491183 ZNF92Q03936 586 aa15.09■□□□□ 0.01
HMGN1-219ENST00000491183 ZNF181Q2M3W8 571 aa15.09■□□□□ 0.01
HMGN1-219ENST00000491183 CD300LDQ6UXZ3 194 aa15.09■□□□□ 0.01
HMGN1-219ENST00000491183 PGAP1Q75T13 922 aa15.09■□□□□ 0.01
HMGN1-219ENST00000491183 ADGRG5Q8IZF4 528 aa15.09■□□□□ 0.01
HMGN1-219ENST00000491183 OR2T33Q8NG76 320 aa15.09■□□□□ 0.01
HMGN1-219ENST00000491183 OR10G2Q8NGC3 310 aa15.09■□□□□ 0.01
HMGN1-219ENST00000491183 ZFAND2BQ8WV99 257 aa15.09■□□□□ 0.01
HMGN1-219ENST00000491183 DVL3Q92997 716 aaPredicted RBP15.09■□□□□ 0.01
HMGN1-219ENST00000491183 CCDC124Q96CT7 223 aaKnown RBP15.09■□□□□ 0.01
HMGN1-219ENST00000491183 CHID1Q9BWS9 393 aa15.09■□□□□ 0.01
HMGN1-219ENST00000491183 INSIG2Q9Y5U4 225 aa15.09■□□□□ 0.01
HMGN1-219ENST00000491183 CD300LBA8K4G0 201 aa15.08■□□□□ 0
HMGN1-219ENST00000491183 ZNF593O00488 134 aaPredicted RBP15.08■□□□□ 0
HMGN1-219ENST00000491183 SPARCP09486 303 aa15.08■□□□□ 0
HMGN1-219ENST00000491183 GATA4P43694 442 aa15.08■□□□□ 0
HMGN1-219ENST00000491183 ENTPD1P49961 510 aa15.08■□□□□ 0
HMGN1-219ENST00000491183 PRKXP51817 358 aa15.08■□□□□ 0
HMGN1-219ENST00000491183 ZNF154Q13106 437 aa15.08■□□□□ 0
HMGN1-219ENST00000491183 TEX30Q5JUR7 227 aa15.08■□□□□ 0
HMGN1-219ENST00000491183 GLYATL3Q5SZD4 288 aa15.08■□□□□ 0
HMGN1-219ENST00000491183 LINC01590Q5TEZ4 76 aa15.08■□□□□ 0
HMGN1-219ENST00000491183 DRAM2Q6UX65 266 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms