RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 CFAP77Q6ZQR2 320 aa16.52■□□□□ 0.24
SREBF1-216ENST00000490796 PGAP1Q75T13 922 aa16.52■□□□□ 0.24
SREBF1-216ENST00000490796 MRPL21Q7Z2W9 205 aaKnown RBP16.52■□□□□ 0.24
SREBF1-216ENST00000490796 BCL6BQ8N143 479 aaPredicted RBP16.52■□□□□ 0.24
SREBF1-216ENST00000490796 PARP8Q8N3A8 854 aa16.52■□□□□ 0.24
SREBF1-216ENST00000490796 SDR9C7Q8NEX9 313 aa16.52■□□□□ 0.24
SREBF1-216ENST00000490796 GNPDA2Q8TDQ7 276 aa16.52■□□□□ 0.24
SREBF1-216ENST00000490796 RAB40AQ8WXH6 277 aa16.52■□□□□ 0.24
SREBF1-216ENST00000490796 SPTSSAQ969W0 71 aa16.52■□□□□ 0.24
SREBF1-216ENST00000490796 SLCO4A1Q96BD0 722 aa16.52■□□□□ 0.24
SREBF1-216ENST00000490796 TMEM246Q9BRR3 403 aa16.52■□□□□ 0.24
SREBF1-216ENST00000490796 FUZQ9BT04 418 aa16.52■□□□□ 0.24
SREBF1-216ENST00000490796 CLN8Q9UBY8 286 aa16.52■□□□□ 0.24
SREBF1-216ENST00000490796 PCDHGB1Q9Y5G3 927 aa16.52■□□□□ 0.24
SREBF1-216ENST00000490796 IGHV3OR16-10A0A075B7F0 116 aa16.51■□□□□ 0.23
SREBF1-216ENST00000490796 IGHV2-70DA0A0C4DH43 119 aa16.51■□□□□ 0.23
SREBF1-216ENST00000490796 RRM2P31350 389 aa16.51■□□□□ 0.23
SREBF1-216ENST00000490796 TRAP1Q12931 704 aaKnown RBP16.51■□□□□ 0.23
SREBF1-216ENST00000490796 GK2Q14410 553 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-216ENST00000490796 SAMD4BQ5PRF9 694 aaKnown RBP16.51■□□□□ 0.23
SREBF1-216ENST00000490796 SHISA2Q6UWI4 295 aa16.51■□□□□ 0.23
SREBF1-216ENST00000490796 COLCA1Q6ZS62 124 aa16.51■□□□□ 0.23
SREBF1-216ENST00000490796 OR52L1Q8NGH7 329 aa16.51■□□□□ 0.23
SREBF1-216ENST00000490796 ERGIC1Q969X5 290 aa16.51■□□□□ 0.23
SREBF1-216ENST00000490796 ZNF747Q9BV97 191 aa16.51■□□□□ 0.23
SREBF1-216ENST00000490796 FN3KQ9H479 309 aa16.51■□□□□ 0.23
SREBF1-216ENST00000490796 CYB5R1Q9UHQ9 305 aa16.51■□□□□ 0.23
SREBF1-216ENST00000490796 KCNG2Q9UJ96 466 aa16.51■□□□□ 0.23
SREBF1-216ENST00000490796 DOCK11Q5JSL3 2073 aa16.5■□□□□ 0.23
SREBF1-216ENST00000490796 PPIAL4GP0DN37 164 aa16.5■□□□□ 0.23
SREBF1-216ENST00000490796 GGT2P36268 569 aa16.5■□□□□ 0.23
SREBF1-216ENST00000490796 PRSS12P56730 875 aa16.5■□□□□ 0.23
SREBF1-216ENST00000490796 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.5■□□□□ 0.23
SREBF1-216ENST00000490796 OR8G1Q15617 311 aa16.5■□□□□ 0.23
SREBF1-216ENST00000490796 ZNF404Q494X3 552 aa16.5■□□□□ 0.23
SREBF1-216ENST00000490796 SLC35F1Q5T1Q4 408 aa16.5■□□□□ 0.23
SREBF1-216ENST00000490796 CPLX4Q7Z7G2 160 aa16.5■□□□□ 0.23
SREBF1-216ENST00000490796 ZBTB46Q86UZ6 589 aa16.5■□□□□ 0.23
SREBF1-216ENST00000490796 CELF2-AS1Q8N7Q2 184 aa16.5■□□□□ 0.23
SREBF1-216ENST00000490796 PROKR2Q8NFJ6 384 aa16.5■□□□□ 0.23
SREBF1-216ENST00000490796 SLC22A4Q9H015 551 aa16.5■□□□□ 0.23
SREBF1-216ENST00000490796 OR6C68A6NDL8 312 aa16.49■□□□□ 0.23
SREBF1-216ENST00000490796 M0R135 149 aa16.49■□□□□ 0.23
SREBF1-216ENST00000490796 FSTL3O95633 263 aa16.49■□□□□ 0.23
SREBF1-216ENST00000490796 IGHV4-38-2P0DP08 117 aa16.49■□□□□ 0.23
SREBF1-216ENST00000490796 HSD17B1P14061 328 aa16.49■□□□□ 0.23
SREBF1-216ENST00000490796 MSX2P35548 267 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-216ENST00000490796 GATA4P43694 442 aa16.49■□□□□ 0.23
SREBF1-216ENST00000490796 TSPAN31Q12999 210 aa16.49■□□□□ 0.23
SREBF1-216ENST00000490796 KCNJ8Q15842 424 aa16.49■□□□□ 0.23
SREBF1-216ENST00000490796 RSPO1Q2MKA7 263 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-216ENST00000490796 CLEC12AQ5QGZ9 265 aa16.49■□□□□ 0.23
SREBF1-216ENST00000490796 FAM201AQ5SY85 155 aa16.49■□□□□ 0.23
SREBF1-216ENST00000490796 RPL13AP3Q6NVV1 102 aa16.49■□□□□ 0.23
SREBF1-216ENST00000490796 DCDC5Q6ZRR9 648 aa16.49■□□□□ 0.23
SREBF1-216ENST00000490796 UPRTQ96BW1 309 aa16.49■□□□□ 0.23
SREBF1-216ENST00000490796 ZNF799Q96GE5 643 aa16.49■□□□□ 0.23
SREBF1-216ENST00000490796 ZNF48Q96MX3 618 aaPredicted RBP16.49■□□□□ 0.23
SREBF1-216ENST00000490796 CDRT15Q96T59 188 aa16.49■□□□□ 0.23
SREBF1-216ENST00000490796 NUDT16L1Q9BRJ7 211 aaKnown RBP16.49■□□□□ 0.23
SREBF1-216ENST00000490796 FN3KRPQ9HA64 309 aa16.49■□□□□ 0.23
SREBF1-216ENST00000490796 UFSP2Q9NUQ7 469 aa16.49■□□□□ 0.23
SREBF1-216ENST00000490796 TRAV40A0A0B4J280 105 aa16.48■□□□□ 0.23
SREBF1-216ENST00000490796 GGT3PA6NGU5 568 aa16.48■□□□□ 0.23
SREBF1-216ENST00000490796 ARPC2O15144 300 aa16.48■□□□□ 0.23
SREBF1-216ENST00000490796 SEMG1P04279 462 aa16.48■□□□□ 0.23
SREBF1-216ENST00000490796 RNASE1P07998 156 aaKnown RBP16.48■□□□□ 0.23
SREBF1-216ENST00000490796 CD200P41217 278 aa16.48■□□□□ 0.23
SREBF1-216ENST00000490796 GSSP48637 474 aa16.48■□□□□ 0.23
SREBF1-216ENST00000490796 DBPQ10586 325 aaPredicted RBP16.48■□□□□ 0.23
SREBF1-216ENST00000490796 TAF13Q15543 124 aa16.48■□□□□ 0.23
SREBF1-216ENST00000490796 KRTAP27-1Q3LI81 207 aa16.48■□□□□ 0.23
SREBF1-216ENST00000490796 ZNF620Q6ZNG0 422 aa16.48■□□□□ 0.23
SREBF1-216ENST00000490796 NAA40Q86UY6 237 aa16.48■□□□□ 0.23
SREBF1-216ENST00000490796 ZDHHC21Q8IVQ6 265 aa16.48■□□□□ 0.23
SREBF1-216ENST00000490796 PGAM4Q8N0Y7 254 aa16.48■□□□□ 0.23
SREBF1-216ENST00000490796 OR4C15Q8NGM1 316 aa16.48■□□□□ 0.23
SREBF1-216ENST00000490796 OR2T4Q8NH00 348 aa16.48■□□□□ 0.23
SREBF1-216ENST00000490796 ZDHHC16Q969W1 377 aa16.48■□□□□ 0.23
SREBF1-216ENST00000490796 MMADHCQ9H3L0 296 aaPredicted RBP16.48■□□□□ 0.23
SREBF1-216ENST00000490796 IL1RAPQ9NPH3 570 aa16.48■□□□□ 0.23
SREBF1-216ENST00000490796 KIF17Q9P2E2 1029 aa16.48■□□□□ 0.23
SREBF1-216ENST00000490796 KIR2DS1A0A191URI9 304 aa16.47■□□□□ 0.23
SREBF1-216ENST00000490796 PHYHO14832 338 aa16.47■□□□□ 0.23
SREBF1-216ENST00000490796 FAM20BO75063 409 aa16.47■□□□□ 0.23
SREBF1-216ENST00000490796 KRT36O76013 467 aa16.47■□□□□ 0.23
SREBF1-216ENST00000490796 CA6P23280 308 aa16.47■□□□□ 0.23
SREBF1-216ENST00000490796 PYCR1P32322 319 aa16.47■□□□□ 0.23
SREBF1-216ENST00000490796 PMELP40967 661 aa16.47■□□□□ 0.23
SREBF1-216ENST00000490796 IL13RA1P78552 427 aa16.47■□□□□ 0.23
SREBF1-216ENST00000490796 MXRA7P84157 204 aa16.47■□□□□ 0.23
SREBF1-216ENST00000490796 PAX2Q02962 417 aa16.47■□□□□ 0.23
SREBF1-216ENST00000490796 MAB21L1Q13394 359 aa16.47■□□□□ 0.23
SREBF1-216ENST00000490796 PRAMEF6Q5VXH4 476 aa16.47■□□□□ 0.23
SREBF1-216ENST00000490796 WDR25Q64LD2 544 aaPredicted RBP16.47■□□□□ 0.23
SREBF1-216ENST00000490796 BOLLQ8N9W6 283 aaKnown RBP16.47■□□□□ 0.23
SREBF1-216ENST00000490796 Q8TCH9 128 aa16.47■□□□□ 0.23
SREBF1-216ENST00000490796 NDE1Q9NXR1 346 aa16.47■□□□□ 0.23
SREBF1-216ENST00000490796 RNF7Q9UBF6 113 aa16.47■□□□□ 0.23
SREBF1-216ENST00000490796 CDH10Q9Y6N8 788 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms