RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 PGAP1Q75T13 922 aa14.75□□□□□ -0.05
SEC13-218ENST00000490283 DCXRQ7Z4W1 244 aa14.75□□□□□ -0.05
SEC13-218ENST00000490283 KLHL36Q8N4N3 616 aa14.75□□□□□ -0.05
SEC13-218ENST00000490283 RFLNBQ8N5W9 214 aa14.75□□□□□ -0.05
SEC13-218ENST00000490283 ZNF283Q8N7M2 679 aa14.75□□□□□ -0.05
SEC13-218ENST00000490283 OR10AD1Q8NGE0 317 aa14.75□□□□□ -0.05
SEC13-218ENST00000490283 SPRYD4Q8WW59 207 aaPredicted RBP14.75□□□□□ -0.05
SEC13-218ENST00000490283 MAP6Q96JE9 813 aa14.75□□□□□ -0.05
SEC13-218ENST00000490283 PNRC2Q9NPJ4 139 aaKnown RBP14.75□□□□□ -0.05
SEC13-218ENST00000490283 CMC2Q9NRP2 79 aa14.75□□□□□ -0.05
SEC13-218ENST00000490283 DDX28Q9NUL7 540 aaKnown RBP14.75□□□□□ -0.05
SEC13-218ENST00000490283 TMEM100Q9NV29 134 aa14.75□□□□□ -0.05
SEC13-218ENST00000490283 FAM53CQ9NYF3 392 aa14.75□□□□□ -0.05
SEC13-218ENST00000490283 PDP1Q9P0J1 537 aaPredicted RBP14.75□□□□□ -0.05
SEC13-218ENST00000490283 NOP16Q9Y3C1 178 aaKnown RBP14.75□□□□□ -0.05
SEC13-218ENST00000490283 LRRC30A6NM36 301 aa14.74□□□□□ -0.05
SEC13-218ENST00000490283 PLPP2O43688 288 aa14.74□□□□□ -0.05
SEC13-218ENST00000490283 DEAF1O75398 565 aaPredicted RBP14.74□□□□□ -0.05
SEC13-218ENST00000490283 DNAJC8O75937 253 aaPredicted RBP14.74□□□□□ -0.05
SEC13-218ENST00000490283 GYPBP06028 91 aa14.74□□□□□ -0.05
SEC13-218ENST00000490283 GATA3P23771 443 aa14.74□□□□□ -0.05
SEC13-218ENST00000490283 POU1F1P28069 291 aa14.74□□□□□ -0.05
SEC13-218ENST00000490283 GRK5P34947 590 aa14.74□□□□□ -0.05
SEC13-218ENST00000490283 RPS27P42677 84 aaKnown RBP14.74□□□□□ -0.05
SEC13-218ENST00000490283 RAD23AP54725 363 aa14.74□□□□□ -0.05
SEC13-218ENST00000490283 GK2Q14410 553 aaPredicted RBP14.74□□□□□ -0.05
SEC13-218ENST00000490283 RSPO1Q2MKA7 263 aaPredicted RBP14.74□□□□□ -0.05
SEC13-218ENST00000490283 SPRNQ5BIV9 151 aa14.74□□□□□ -0.05
SEC13-218ENST00000490283 DCAF12L2Q5VW00 463 aa14.74□□□□□ -0.05
SEC13-218ENST00000490283 DRAM2Q6UX65 266 aa14.74□□□□□ -0.05
SEC13-218ENST00000490283 SLCO4A1Q96BD0 722 aa14.74□□□□□ -0.05
SEC13-218ENST00000490283 MEGF10Q96KG7 1140 aa14.74□□□□□ -0.05
SEC13-218ENST00000490283 SLC30A2Q9BRI3 323 aa14.74□□□□□ -0.05
SEC13-218ENST00000490283 TEX12Q9BXU0 123 aa14.74□□□□□ -0.05
SEC13-218ENST00000490283 NMNAT2Q9BZQ4 307 aa14.74□□□□□ -0.05
SEC13-218ENST00000490283 METTL17Q9H7H0 456 aaPredicted RBP14.74□□□□□ -0.05
SEC13-218ENST00000490283 CENPMQ9NSP4 180 aa14.74□□□□□ -0.05
SEC13-218ENST00000490283 ZNF878C9JN71 531 aa14.73□□□□□ -0.05
SEC13-218ENST00000490283 J3QLI3 93 aa14.73□□□□□ -0.05
SEC13-218ENST00000490283 ZNF593O00488 134 aaPredicted RBP14.73□□□□□ -0.05
SEC13-218ENST00000490283 TCF21O43680 179 aa14.73□□□□□ -0.05
SEC13-218ENST00000490283 FOXH1O75593 365 aa14.73□□□□□ -0.05
SEC13-218ENST00000490283 IGHV2-70P01814 119 aa14.73□□□□□ -0.05
SEC13-218ENST00000490283 SLC15A1P46059 708 aa14.73□□□□□ -0.05
SEC13-218ENST00000490283 BTG1P62324 171 aa14.73□□□□□ -0.05
SEC13-218ENST00000490283 CBX1P83916 185 aa14.73□□□□□ -0.05
SEC13-218ENST00000490283 TMEM155Q4W5P6 130 aa14.73□□□□□ -0.05
SEC13-218ENST00000490283 LYPD4Q6UWN0 246 aa14.73□□□□□ -0.05
SEC13-218ENST00000490283 C1orf87Q8N0U7 546 aa14.73□□□□□ -0.05
SEC13-218ENST00000490283 MUC20Q8N307 709 aaPredicted RBP14.73□□□□□ -0.05
SEC13-218ENST00000490283 ZNF511Q8NB15 262 aa14.73□□□□□ -0.05
SEC13-218ENST00000490283 SLAMF6Q96DU3 332 aa14.73□□□□□ -0.05
SEC13-218ENST00000490283 SLC22A4Q9H015 551 aa14.73□□□□□ -0.05
SEC13-218ENST00000490283 GCM1Q9NP62 436 aa14.73□□□□□ -0.05
SEC13-218ENST00000490283 CLUP10909 449 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 ANXA8P13928 327 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 IRF2P14316 349 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 HSD11B1P28845 292 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 MDH2P40926 338 aaKnown RBP14.72□□□□□ -0.05
SEC13-218ENST00000490283 RASSF2P50749 326 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 MMP16P51512 607 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 GRB2P62993 217 aaKnown RBP14.72□□□□□ -0.05
SEC13-218ENST00000490283 TEX30Q5JUR7 227 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 NAA40Q86UY6 237 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 PHC2Q8IXK0 858 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 IQCF1Q8N6M8 205 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 OR10S1Q8NGN2 331 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 OR6N2Q8NGY6 317 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 ZNRF4Q8WWF5 429 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 PLEKHA8Q96JA3 519 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 INTS14Q96SY0 518 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 KCNJ15Q99712 375 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 OCEL1Q9H607 264 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 OPA3Q9H6K4 179 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 SP140LQ9H930 580 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 G6PC2Q9NQR9 355 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 DCAF16Q9NXF7 216 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 KIF17Q9P2E2 1029 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 DNAJB9Q9UBS3 223 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 POMPQ9Y244 141 aa14.72□□□□□ -0.05
SEC13-218ENST00000490283 GGT3PA6NGU5 568 aa14.71□□□□□ -0.05
SEC13-218ENST00000490283 PRR23D1E9PI22 279 aaPredicted RBP14.71□□□□□ -0.05
SEC13-218ENST00000490283 F5H5P2 479 aa14.71□□□□□ -0.05
SEC13-218ENST00000490283 TMEM178BH3BS89 294 aa14.71□□□□□ -0.05
SEC13-218ENST00000490283 FKBP6O75344 327 aa14.71□□□□□ -0.05
SEC13-218ENST00000490283 APOC1P02654 83 aa14.71□□□□□ -0.05
SEC13-218ENST00000490283 HMGN1P05114 100 aa14.71□□□□□ -0.05
SEC13-218ENST00000490283 PRR23D2P0DMB1 279 aaPredicted RBP14.71□□□□□ -0.05
SEC13-218ENST00000490283 GSTT1P30711 240 aa14.71□□□□□ -0.05
SEC13-218ENST00000490283 OTX1P32242 354 aaPredicted RBP14.71□□□□□ -0.05
SEC13-218ENST00000490283 PRKXP51817 358 aa14.71□□□□□ -0.05
SEC13-218ENST00000490283 LCN2P80188 198 aa14.71□□□□□ -0.05
SEC13-218ENST00000490283 EIF2B1Q14232 305 aaKnown RBP14.71□□□□□ -0.05
SEC13-218ENST00000490283 PCK2Q16822 640 aa14.71□□□□□ -0.05
SEC13-218ENST00000490283 SHFQ7M4L6 423 aa14.71□□□□□ -0.05
SEC13-218ENST00000490283 LRRC28Q86X40 367 aaPredicted RBP14.71□□□□□ -0.05
SEC13-218ENST00000490283 ERI1Q8IV48 349 aaKnown RBP14.71□□□□□ -0.05
SEC13-218ENST00000490283 SLC7A6OSQ96CW6 309 aaPredicted RBP14.71□□□□□ -0.05
SEC13-218ENST00000490283 TOR3AQ9H497 397 aa14.71□□□□□ -0.05
SEC13-218ENST00000490283 N6AMT1Q9Y5N5 214 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms