RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 THBS2P35442 1172 aa16.69■□□□□ 0.26
SMC4-222ENST00000490207 SLC6A9P48067 706 aa16.69■□□□□ 0.26
SMC4-222ENST00000490207 CBX1P83916 185 aa16.69■□□□□ 0.26
SMC4-222ENST00000490207 MALLQ13021 153 aa16.69■□□□□ 0.26
SMC4-222ENST00000490207 ACSM5Q6NUN0 579 aa16.69■□□□□ 0.26
SMC4-222ENST00000490207 DCXRQ7Z4W1 244 aa16.69■□□□□ 0.26
SMC4-222ENST00000490207 ATG16L2Q8NAA4 619 aa16.69■□□□□ 0.26
SMC4-222ENST00000490207 ZNF511Q8NB15 262 aa16.69■□□□□ 0.26
SMC4-222ENST00000490207 BHLHE23Q8NDY6 225 aa16.69■□□□□ 0.26
SMC4-222ENST00000490207 OR13G1Q8NGZ3 307 aa16.69■□□□□ 0.26
SMC4-222ENST00000490207 UBAP1Q9NZ09 502 aa16.69■□□□□ 0.26
SMC4-222ENST00000490207 IGHV2-70P01814 119 aa16.68■□□□□ 0.26
SMC4-222ENST00000490207 PRSS12P56730 875 aa16.68■□□□□ 0.26
SMC4-222ENST00000490207 GK2Q14410 553 aaPredicted RBP16.68■□□□□ 0.26
SMC4-222ENST00000490207 SLC27A4Q6P1M0 643 aa16.68■□□□□ 0.26
SMC4-222ENST00000490207 NAA40Q86UY6 237 aa16.68■□□□□ 0.26
SMC4-222ENST00000490207 COPS4Q9BT78 406 aa16.68■□□□□ 0.26
SMC4-222ENST00000490207 PPP1R3CQ9UQK1 317 aa16.68■□□□□ 0.26
SMC4-222ENST00000490207 FAM183AA6NL82 134 aa16.67■□□□□ 0.26
SMC4-222ENST00000490207 MLNRO43193 412 aa16.67■□□□□ 0.26
SMC4-222ENST00000490207 PNPP00491 289 aa16.67■□□□□ 0.26
SMC4-222ENST00000490207 POU1F1P28069 291 aa16.67■□□□□ 0.26
SMC4-222ENST00000490207 MMP16P51512 607 aa16.67■□□□□ 0.26
SMC4-222ENST00000490207 BLVRAP53004 296 aa16.67■□□□□ 0.26
SMC4-222ENST00000490207 PCK2Q16822 640 aa16.67■□□□□ 0.26
SMC4-222ENST00000490207 LINC01590Q5TEZ4 76 aa16.67■□□□□ 0.26
SMC4-222ENST00000490207 MRPL21Q7Z2W9 205 aaKnown RBP16.67■□□□□ 0.26
SMC4-222ENST00000490207 HS3ST5Q8IZT8 346 aa16.67■□□□□ 0.26
SMC4-222ENST00000490207 TMEM158Q8WZ71 300 aa16.67■□□□□ 0.26
SMC4-222ENST00000490207 SLAMF6Q96DU3 332 aa16.67■□□□□ 0.26
SMC4-222ENST00000490207 MEGF10Q96KG7 1140 aa16.67■□□□□ 0.26
SMC4-222ENST00000490207 SLC30A2Q9BRI3 323 aa16.67■□□□□ 0.26
SMC4-222ENST00000490207 CADM1Q9BY67 442 aaKnown RBP16.67■□□□□ 0.26
SMC4-222ENST00000490207 MED20Q9H944 212 aa16.67■□□□□ 0.26
SMC4-222ENST00000490207 ZNF556Q9HAH1 456 aa16.67■□□□□ 0.26
SMC4-222ENST00000490207 DNAJB9Q9UBS3 223 aa16.67■□□□□ 0.26
SMC4-222ENST00000490207 ZNF878C9JN71 531 aa16.66■□□□□ 0.26
SMC4-222ENST00000490207 H0YL77 283 aa16.66■□□□□ 0.26
SMC4-222ENST00000490207 ZNF593O00488 134 aaPredicted RBP16.66■□□□□ 0.26
SMC4-222ENST00000490207 PLPP2O43688 288 aa16.66■□□□□ 0.26
SMC4-222ENST00000490207 OTX1P32242 354 aaPredicted RBP16.66■□□□□ 0.26
SMC4-222ENST00000490207 RBMXP38159 391 aaKnown RBP16.66■□□□□ 0.26
SMC4-222ENST00000490207 SRP9P49458 86 aaKnown RBP16.66■□□□□ 0.26
SMC4-222ENST00000490207 BNIP1Q12981 228 aa16.66■□□□□ 0.26
SMC4-222ENST00000490207 TAF13Q15543 124 aa16.66■□□□□ 0.26
SMC4-222ENST00000490207 SNAI3Q3KNW1 292 aa16.66■□□□□ 0.26
SMC4-222ENST00000490207 TEX30Q5JUR7 227 aa16.66■□□□□ 0.26
SMC4-222ENST00000490207 SHQ1Q6PI26 577 aaKnown RBP16.66■□□□□ 0.26
SMC4-222ENST00000490207 DRAM2Q6UX65 266 aa16.66■□□□□ 0.26
SMC4-222ENST00000490207 PGAP1Q75T13 922 aa16.66■□□□□ 0.26
SMC4-222ENST00000490207 PAPD5Q8NDF8 572 aaKnown RBP16.66■□□□□ 0.26
SMC4-222ENST00000490207 OR6N2Q8NGY6 317 aa16.66■□□□□ 0.26
SMC4-222ENST00000490207 ST7LQ8TDW4 575 aa16.66■□□□□ 0.26
SMC4-222ENST00000490207 SLCO4A1Q96BD0 722 aa16.66■□□□□ 0.26
SMC4-222ENST00000490207 OTULINQ96BN8 352 aa16.66■□□□□ 0.26
SMC4-222ENST00000490207 SIGLEC11Q96RL6 698 aa16.66■□□□□ 0.26
SMC4-222ENST00000490207 GCM1Q9NP62 436 aa16.66■□□□□ 0.26
SMC4-222ENST00000490207 G6PC2Q9NQR9 355 aa16.66■□□□□ 0.26
SMC4-222ENST00000490207 CENPMQ9NSP4 180 aa16.66■□□□□ 0.26
SMC4-222ENST00000490207 TMEM100Q9NV29 134 aa16.66■□□□□ 0.26
SMC4-222ENST00000490207 F5H5P2 479 aa16.65■□□□□ 0.26
SMC4-222ENST00000490207 GSC2O15499 205 aa16.65■□□□□ 0.26
SMC4-222ENST00000490207 SBK2P0C263 348 aa16.65■□□□□ 0.26
SMC4-222ENST00000490207 OSMP13725 252 aa16.65■□□□□ 0.26
SMC4-222ENST00000490207 PAICSP22234 425 aaKnown RBP16.65■□□□□ 0.26
SMC4-222ENST00000490207 BTG1P62324 171 aa16.65■□□□□ 0.26
SMC4-222ENST00000490207 GINS1Q14691 196 aa16.65■□□□□ 0.26
SMC4-222ENST00000490207 TMEM155Q4W5P6 130 aa16.65■□□□□ 0.26
SMC4-222ENST00000490207 ERI1Q8IV48 349 aaKnown RBP16.65■□□□□ 0.26
SMC4-222ENST00000490207 PHC2Q8IXK0 858 aa16.65■□□□□ 0.26
SMC4-222ENST00000490207 SPICQ8N5J4 248 aa16.65■□□□□ 0.26
SMC4-222ENST00000490207 SPATA3Q8NHX4 192 aa16.65■□□□□ 0.26
SMC4-222ENST00000490207 INTS14Q96SY0 518 aa16.65■□□□□ 0.26
SMC4-222ENST00000490207 KCNJ15Q99712 375 aa16.65■□□□□ 0.26
SMC4-222ENST00000490207 COL6A5A8TX70 2615 aa16.65■□□□□ 0.26
SMC4-222ENST00000490207 A0A0G2JMP0 313 aa16.64■□□□□ 0.25
SMC4-222ENST00000490207 A0A0X1KG70 313 aa16.64■□□□□ 0.25
SMC4-222ENST00000490207 A0A1B0GWJ7 208 aa16.64■□□□□ 0.25
SMC4-222ENST00000490207 IFNL4K9M1U5 179 aa16.64■□□□□ 0.25
SMC4-222ENST00000490207 GLCEO94923 617 aa16.64■□□□□ 0.25
SMC4-222ENST00000490207 ANXA8P13928 327 aa16.64■□□□□ 0.25
SMC4-222ENST00000490207 PRKACGP22612 351 aa16.64■□□□□ 0.25
SMC4-222ENST00000490207 ANOS1P23352 680 aa16.64■□□□□ 0.25
SMC4-222ENST00000490207 GSTT1P30711 240 aa16.64■□□□□ 0.25
SMC4-222ENST00000490207 PRKXP51817 358 aa16.64■□□□□ 0.25
SMC4-222ENST00000490207 EIF2B1Q14232 305 aaKnown RBP16.64■□□□□ 0.25
SMC4-222ENST00000490207 ZMYND11Q15326 602 aa16.64■□□□□ 0.25
SMC4-222ENST00000490207 FAHD2BQ6P2I3 314 aaPredicted RBP16.64■□□□□ 0.25
SMC4-222ENST00000490207 SPATC1Q76KD6 591 aa16.64■□□□□ 0.25
SMC4-222ENST00000490207 KLHL36Q8N4N3 616 aa16.64■□□□□ 0.25
SMC4-222ENST00000490207 OR4M2Q8NGB6 313 aa16.64■□□□□ 0.25
SMC4-222ENST00000490207 OR2AE1Q8NHA4 323 aa16.64■□□□□ 0.25
SMC4-222ENST00000490207 ZNF420Q8TAQ5 688 aaPredicted RBP16.64■□□□□ 0.25
SMC4-222ENST00000490207 SPRYD4Q8WW59 207 aaPredicted RBP16.64■□□□□ 0.25
SMC4-222ENST00000490207 FAHD2AQ96GK7 314 aa16.64■□□□□ 0.25
SMC4-222ENST00000490207 KIF17Q9P2E2 1029 aa16.64■□□□□ 0.25
SMC4-222ENST00000490207 PCDHB10Q9UN67 800 aa16.64■□□□□ 0.25
SMC4-222ENST00000490207 PRR23D1E9PI22 279 aaPredicted RBP16.63■□□□□ 0.25
SMC4-222ENST00000490207 TMEM178BH3BS89 294 aa16.63■□□□□ 0.25
SMC4-222ENST00000490207 HLA-DPB1P04440 258 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms