RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 MAT1AQ00266 395 aaKnown RBP8.05□□□□□ -1.12
LSAMP-205ENST00000490035 CMTM4Q8IZR5 234 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 MAP1BP46821 2468 aaKnown RBP8.05□□□□□ -1.12
LSAMP-205ENST00000490035 ASCC3Q8N3C0 2202 aaKnown RBP8.05□□□□□ -1.12
LSAMP-205ENST00000490035 ANKUB1A6NFN9 424 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 CRYAAP02489 173 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 APEHP13798 732 aaKnown RBP8.05□□□□□ -1.12
LSAMP-205ENST00000490035 ARNTP27540 789 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 SRP9P49458 86 aaKnown RBP8.05□□□□□ -1.12
LSAMP-205ENST00000490035 EDDM3BP56851 147 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 PTCRAQ6ISU1 281 aaPredicted RBP8.05□□□□□ -1.12
LSAMP-205ENST00000490035 BPIFCQ8NFQ6 507 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 M0R082 166 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 PTAFRP25105 342 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 NPY4RP50391 375 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 IL11RAQ14626 422 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 SLC17A1Q14916 467 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 DLK2Q6UY11 383 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 SSX9Q7RTT3 188 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 MARCH3Q86UD3 253 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 GABRG1Q8N1C3 465 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 ZNF687Q8N1G0 1237 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 SIGLECL1Q8N7X8 197 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 C10orf35Q96D05 121 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 DDOQ99489 341 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 TEX101Q9BY14 249 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 ZNF355PQ9NSJ1 428 aa8.05□□□□□ -1.12
LSAMP-205ENST00000490035 A0A1W2PR48 441 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 LINC01553A4QN01 128 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 CTSLP07711 333 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 HMGA1P17096 107 aaKnown RBP8.04□□□□□ -1.12
LSAMP-205ENST00000490035 CLPPQ16740 277 aaPredicted RBP8.04□□□□□ -1.12
LSAMP-205ENST00000490035 PRTGQ2VWP7 1150 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 TBPL2Q6SJ96 375 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 MED9Q9NWA0 146 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 CAPZBP47756 277 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 FXNQ16595 210 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 TMED3Q9Y3Q3 217 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 GLI3P10071 1580 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 ZFP92A6NM28 416 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 ORM1P02763 201 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 GCSHP23434 173 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 RPL12P30050 165 aaKnown RBP8.04□□□□□ -1.12
LSAMP-205ENST00000490035 FUT7Q11130 342 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 APOBEC3DQ96AK3 386 aaPredicted RBP8.04□□□□□ -1.12
LSAMP-205ENST00000490035 MACROD1Q9BQ69 325 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 CTSFQ9UBX1 484 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 AQP8O94778 261 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 PDGFBP01127 241 aaPredicted RBP8.04□□□□□ -1.12
LSAMP-205ENST00000490035 FGF9P31371 208 aaPredicted RBP8.04□□□□□ -1.12
LSAMP-205ENST00000490035 MEX3DQ86XN8 651 aaKnown RBP8.04□□□□□ -1.12
LSAMP-205ENST00000490035 LINC00346Q8IVM7 164 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 ANGPTL6Q8NI99 470 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 SMIM4Q8WVI0 70 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 FAM122AQ96E09 287 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 CTRB1P17538 263 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 CCR6P51684 374 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 CLDN12P56749 244 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 PHLDA2Q53GA4 152 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 CTRB2Q6GPI1 263 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 TMEM217Q8N7C4 229 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 TVP23CQ96ET8 276 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 COMMD5Q9GZQ3 224 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 OR51I2Q9H344 312 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 PROCRQ9UNN8 238 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 CDONQ4KMG0 1287 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 OR8G2PQ6IF36 304 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 NUFIP2Q7Z417 695 aaKnown RBP8.04□□□□□ -1.12
LSAMP-205ENST00000490035 OR1J1Q8NGS3 322 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 IFI44Q8TCB0 444 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 POM121L2Q96KW2 1035 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 H3BQ06 376 aaPredicted RBP8.04□□□□□ -1.12
LSAMP-205ENST00000490035 GJA5P36382 358 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 TESK1Q15569 626 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 VHLLQ6RSH7 139 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 RIMKLAQ8IXN7 391 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 OR5B3Q8NH48 314 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 H1FXQ92522 213 aaKnown RBP8.04□□□□□ -1.12
LSAMP-205ENST00000490035 TUBB1Q9H4B7 451 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 TAS2R4Q9NYW5 299 aa8.04□□□□□ -1.12
LSAMP-205ENST00000490035 OR6C68A6NDL8 312 aa8.03□□□□□ -1.12
LSAMP-205ENST00000490035 LYRM7Q5U5X0 104 aa8.03□□□□□ -1.12
LSAMP-205ENST00000490035 FAM71CQ8NEG0 241 aa8.03□□□□□ -1.12
LSAMP-205ENST00000490035 OR52I2Q8NH67 350 aa8.03□□□□□ -1.12
LSAMP-205ENST00000490035 HSD17B8Q92506 261 aa8.03□□□□□ -1.12
LSAMP-205ENST00000490035 IDSB3KWA1 339 aa8.03□□□□□ -1.12
LSAMP-205ENST00000490035 M0QZ24 198 aa8.03□□□□□ -1.12
LSAMP-205ENST00000490035 SMIM18P0DKX4 95 aa8.03□□□□□ -1.12
LSAMP-205ENST00000490035 BSGP35613 385 aa8.03□□□□□ -1.12
LSAMP-205ENST00000490035 RPL13AP40429 203 aaKnown RBP8.03□□□□□ -1.12
LSAMP-205ENST00000490035 OSR2Q8N2R0 312 aa8.03□□□□□ -1.12
LSAMP-205ENST00000490035 MFSD4AQ8N468 514 aa8.03□□□□□ -1.12
LSAMP-205ENST00000490035 OR5M8Q8NGP6 311 aa8.03□□□□□ -1.12
LSAMP-205ENST00000490035 ZNF764Q96H86 408 aaPredicted RBP8.03□□□□□ -1.12
LSAMP-205ENST00000490035 THOC3Q96J01 351 aaKnown RBP8.03□□□□□ -1.12
LSAMP-205ENST00000490035 LYRM2Q9NU23 88 aaPredicted RBP8.03□□□□□ -1.12
LSAMP-205ENST00000490035 CLEC2DQ9UHP7 191 aa8.03□□□□□ -1.12
LSAMP-205ENST00000490035 ZNF107Q9UII5 783 aaPredicted RBP8.03□□□□□ -1.12
LSAMP-205ENST00000490035 SLC17A4Q9Y2C5 497 aa8.03□□□□□ -1.12
LSAMP-205ENST00000490035 HSPB6O14558 160 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms