RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 POLR2J3Q9H1A7 115 aaKnown RBP5.35□□□□□ -1.55
PRPF40A-210ENST00000489741 WNT5BQ9H1J7 359 aa5.35□□□□□ -1.55
PRPF40A-210ENST00000489741 LRMDAQ9H2I8 198 aa5.35□□□□□ -1.55
PRPF40A-210ENST00000489741 OR51B6Q9H340 312 aa5.35□□□□□ -1.55
PRPF40A-210ENST00000489741 TXNIPQ9H3M7 391 aa5.35□□□□□ -1.55
PRPF40A-210ENST00000489741 SAP30LQ9HAJ7 183 aa5.35□□□□□ -1.55
PRPF40A-210ENST00000489741 INIPQ9NRY2 104 aa5.35□□□□□ -1.55
PRPF40A-210ENST00000489741 DECR2Q9NUI1 292 aa5.35□□□□□ -1.55
PRPF40A-210ENST00000489741 RIMS3Q9UJD0 308 aa5.35□□□□□ -1.55
PRPF40A-210ENST00000489741 VWFP04275 2813 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 C5orf49A4QMS7 147 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 HTR3EA5X5Y0 456 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 CLDN25C9JDP6 229 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 FXYD1O00168 92 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 AP4M1O00189 453 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 PSMD9O00233 223 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 KPNA4O00629 521 aaPredicted RBP5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 KCNAB3O43448 404 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 SPRY3O43610 288 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 RGS10O43665 173 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 IGHV2-70P01814 119 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 IGHMP01871 453 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 MT-ND5P03915 603 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 CST2P09228 141 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 THRBP10828 461 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 TNFRSF1BP20333 461 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 DAP3P51398 398 aaKnown RBP5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 UBA52P62987 128 aaKnown RBP5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 ACTG1P63261 375 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 HSF2Q03933 536 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 PSG7Q13046 419 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 TAF11Q15544 211 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 CYP51A1Q16850 503 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 KLF17Q5JT82 389 aaPredicted RBP5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 INTS11Q5TA45 600 aaKnown RBP5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 METTL21CQ5VZV1 264 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 ZNF626Q68DY1 528 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 Q6ZR03 302 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 HDDC2Q7Z4H3 204 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 NANOGNBQ7Z5D8 188 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 LRRC28Q86X40 367 aaPredicted RBP5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 ZNF283Q8N7M2 679 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 DEFB108BQ8NET1 73 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 AKR7LQ8NHP1 331 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 SLC25A40Q8TBP6 338 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 TMEM239Q8WW34 195 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 IPCEF1Q8WWN9 437 aaPredicted RBP5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 RASSF5Q8WWW0 418 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 SPSB4Q96A44 273 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 SGTBQ96EQ0 304 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 TIMD4Q96H15 378 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 ZNF583Q96ND8 569 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 SLC6A7Q99884 636 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 ALG12Q9BV10 488 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 OR2H1Q9GZK4 316 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 OR2J1Q9GZK6 312 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 ZNF696Q9H7X3 374 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 NTN4Q9HB63 628 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 CYSLTR2Q9NS75 346 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 DCAF16Q9NXF7 216 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 STX18Q9P2W9 335 aaKnown RBP5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 TIMM10BQ9Y5J6 103 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 DYSFO75923 2080 aa5.34□□□□□ -1.55
PRPF40A-210ENST00000489741 NOTCH1P46531 2555 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 LOC102723971A0A1B0GUV8 181 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 A8MXK9 166 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 MCIDASD6RGH6 385 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 F5H0A9 414 aaPredicted RBP5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 TRAPPC2LH3BP13 241 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 NPPAP01160 153 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 COX5BP10606 129 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 UMPSP11172 480 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 ZNF12P17014 697 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 CCNOP22674 350 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 TUBG1P23258 451 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 PRTN3P24158 256 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 FPR3P25089 353 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 LAP3P28838 519 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 GCH1P30793 250 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 RBMXP38159 391 aaKnown RBP5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 GDI2P50395 445 aaKnown RBP5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 RPL27P61353 136 aaKnown RBP5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 SUMO2P61956 95 aaKnown RBP5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 PPP1CBP62140 327 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 ERVK-25P63136 954 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 LCN2P80188 198 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 PAX2Q02962 417 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 GLO1Q04760 184 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 PAX8Q06710 450 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 FMODQ06828 376 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 SLC3A1Q07837 685 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 HNRNPA0Q13151 305 aaKnown RBP5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 ENDOGQ14249 297 aaKnown RBP5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 SGCAQ16586 387 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 TMEM155Q4W5P6 130 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 TTMPQ5BVD1 217 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 COQ5Q5HYK3 327 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 SPATA46Q5T0L3 261 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 UNQ6126/PRO20091Q6UXV3 157 aa5.33□□□□□ -1.56
PRPF40A-210ENST00000489741 RFPL4BQ6ZWI9 263 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms