RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 RAB36O95755 333 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 HLA-HP01893 362 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 MMP7P09237 267 aaPredicted RBP9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 CSF3P09919 207 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 OR4A8P0C604 315 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 LIMS3P0CW19 117 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 LIMS4P0CW20 117 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 CD79AP11912 226 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 MYL12AP19105 171 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 MSR1P21757 451 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 CALCRP30988 508 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 ENTPD1P49961 510 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 ZNF84P51523 738 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 EFNA4P52798 201 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 BLVRAP53004 296 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 LSM6P62312 80 aaKnown RBP9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 ZNF85Q03923 595 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 POU4F2Q12837 409 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 EFNB3Q15768 340 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 ADIPOQQ15848 244 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 DGUOKQ16854 277 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 MST1LQ2TV78 715 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 NRN1LQ496H8 165 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 ZNF684Q5T5D7 378 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 SLC18B1Q6NT16 456 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 DPY19L4Q7Z388 723 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 CROCCP3Q8IVE0 287 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 SKA3Q8IX90 412 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 SLC35F2Q8IXU6 374 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 SLC22A24Q8N4F4 322 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 OR10H5Q8NGA6 315 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 OTOSQ8NHW6 89 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 ST7LQ8TDW4 575 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 RNF166Q96A37 237 aaPredicted RBP9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 MAP6Q96JE9 813 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 COG8Q96MW5 612 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 INTS14Q96SY0 518 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 SH3GL3Q99963 347 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 SEC61A2Q9H9S3 476 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 SIAEQ9HAT2 523 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 ISYNA1Q9NPH2 558 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 PNRC2Q9NPJ4 139 aaKnown RBP9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 CLEC2DQ9UHP7 191 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 KCNG2Q9UJ96 466 aa9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 EXOSC1Q9Y3B2 195 aaKnown RBP9.11□□□□□ -0.95
SCAMP4-208ENST00000489554 IGHV2OR16-5A0A0B4J2B6 119 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 A0A1W2PQL4 384 aaPredicted RBP9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 C12orf71A8MTZ7 269 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 ZNF593O00488 134 aaPredicted RBP9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 MYL12BO14950 172 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 INMTO95050 263 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 UBL3O95164 117 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 GABARAPO95166 117 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 FARS2O95363 451 aaKnown RBP9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 F12P00748 615 aaPredicted RBP9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 CELA3BP08861 270 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 CST2P09228 141 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 SLC25A16P16260 332 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 ALOX5APP20292 161 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 ETV1P50549 477 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 GP2P55259 537 aaKnown RBP9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 HGFACQ04756 655 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 SGCAQ16586 387 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 TIGD6Q17RP2 521 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 CORO6Q6QEF8 472 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 VHLLQ6RSH7 139 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 CFAP77Q6ZQR2 320 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 DPPA2Q7Z7J5 298 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 MYPOPQ86VE0 399 aaPredicted RBP9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 LINC00346Q8IVM7 164 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 OR6N2Q8NGY6 317 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 FAM168AQ92567 244 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 YIPF6Q96EC8 236 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 ZNF75AQ96N20 296 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 TBX5Q99593 518 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 ERVK13-1Q9NX77 482 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 LSM2Q9Y333 95 aaKnown RBP9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 SPEF1Q9Y4P9 236 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 NAV3Q8IVL0 2385 aa9.1□□□□□ -0.95
SCAMP4-208ENST00000489554 NSD1Q96L73 2696 aaPredicted RBP9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 HIVEP2P31629 2446 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 IGHV4-30-2A0A087WSY4 118 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 MAGEB4O15481 346 aaPredicted RBP9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 ABHD16AO95870 558 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 HLA-DQA2P01906 255 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 SPARCP09486 303 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 OR2T7P0C7T2 308 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 PATE4P0C8F1 98 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 OR8G3PP0DMU2 310 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 CD36P16671 472 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 ZNF14P17017 642 aaPredicted RBP9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 NPR2P20594 1047 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 ANOS1P23352 680 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 THBS4P35443 961 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 MAP2K4P45985 399 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 PPOXP50336 477 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 RAB1AP62820 205 aa9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 RSPO1Q2MKA7 263 aaPredicted RBP9.09□□□□□ -0.95
SCAMP4-208ENST00000489554 CCDC92Q53HC0 331 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms