RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 MN1Q10571 1320 aaPredicted RBP2.85□□□□□ -1.95
XRN1-213ENST00000489241 LTBP1Q14766 1721 aa2.85□□□□□ -1.95
XRN1-213ENST00000489241 SYCE1LA8MT33 242 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 HACD1B0YJ81 288 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 ZNF879B4DU55 563 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 M0QX08 132 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 RNF113AO15541 343 aaKnown RBP2.84□□□□□ -1.95
XRN1-213ENST00000489241 NEMFO60524 1076 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 NMT2O60551 498 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 SLC25A27O95847 323 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 CD37P11049 281 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 GFAPP14136 432 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 RAB3AP20336 220 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 HOXA9P31269 272 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 PFN2P35080 140 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 CSNK1A1P48729 337 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 HCAR3P49019 387 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 UBE2AP49459 152 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 P2RX1P51575 399 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 MPPED2Q15777 294 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 CEMP1Q6PRD7 247 aaPredicted RBP2.84□□□□□ -1.95
XRN1-213ENST00000489241 METTL13Q8N6R0 699 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 NDNFQ8TB73 568 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 ZFP90Q8TF47 636 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 RNF138Q8WVD3 245 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 RGP1Q92546 391 aaPredicted RBP2.84□□□□□ -1.95
XRN1-213ENST00000489241 NTAN1Q96AB6 310 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 MAP1LC3CQ9BXW4 147 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 SAV1Q9H4B6 383 aaPredicted RBP2.84□□□□□ -1.95
XRN1-213ENST00000489241 ARMC7Q9H6L4 198 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 SLC40A1Q9NP59 571 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 FAM49BQ9NUQ9 324 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 SLC17A7Q9P2U7 560 aa2.84□□□□□ -1.95
XRN1-213ENST00000489241 TRMT112Q9UI30 125 aaKnown RBP2.84□□□□□ -1.95
XRN1-213ENST00000489241 PCDH11XQ9BZA7 1347 aa2.84□□□□□ -1.96
XRN1-213ENST00000489241 ATRXP46100 2492 aa2.84□□□□□ -1.96
XRN1-213ENST00000489241 CARMIL3Q8ND23 1372 aa2.84□□□□□ -1.96
XRN1-213ENST00000489241 IGHV3-66A0A0C4DH42 116 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 LINC00854A0A1B0GVQ3 168 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 TRIM49D1C9J1S8 452 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 ANKRD63C9JTQ0 380 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 INS-IGF2F8WCM5 200 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 RFXANKO14593 260 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 HLA-DPB1P04440 258 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 BCHEP06276 602 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 CTSLP07711 333 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 PPICP45877 212 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 AP1S2P56377 157 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 UBE2NP61088 152 aaKnown RBP2.83□□□□□ -1.96
XRN1-213ENST00000489241 PSMC5P62195 406 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 KIR2DS1Q14954 304 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 C2orf83Q53S99 150 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 TRIML2Q8N7C3 387 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 COX18Q8N8Q8 333 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 Q8N976 141 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 WDR31Q8NA23 367 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 OR11H7Q8NGC8 314 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 RNF170Q96K19 258 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 BTN2A3PQ96KV6 586 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 SLIRPQ9GZT3 109 aaKnown RBP2.83□□□□□ -1.96
XRN1-213ENST00000489241 CHRNA10Q9GZZ6 450 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 REEP1Q9H902 201 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 NOX3Q9HBY0 568 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 RBAKQ9NYW8 714 aaPredicted RBP2.83□□□□□ -1.96
XRN1-213ENST00000489241 ADA2Q9NZK5 511 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 ASTN1O14525 1302 aa2.83□□□□□ -1.96
XRN1-213ENST00000489241 DENND4AQ7Z401 1863 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 TRBV6-6A0A0A6YYG2 114 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 A0A0J9YXV3 536 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 C11orf94C9JXX5 98 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 SLC16A7O60669 478 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 RP2O75695 350 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 PLEKHA8P1O95397 391 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 LCA5LO95447 670 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 OR8U9P0C7N5 309 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 TLX1NBP0CAT3 122 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 PSMC3P17980 439 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 TCN2P20062 427 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 MYCNOSP40205 109 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 GPR4P46093 362 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 UBE2E1P51965 193 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 TAS2R39P59534 338 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 CACNG7P62955 275 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 PAFAH1B2P68402 229 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 ERCC8Q13216 396 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 CYB5R2Q6BCY4 276 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 FAM92BQ6ZTR7 304 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 PID1Q7Z2X4 250 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 PCP2Q8IVA1 136 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 OTUD6BQ8N6M0 293 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 ZNF433Q8N7K0 673 aaPredicted RBP2.82□□□□□ -1.96
XRN1-213ENST00000489241 ARIH2OSQ8N7S6 290 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 GPR26Q8NDV2 337 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 OR8U1Q8NH10 309 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 LRRC20Q8TCA0 184 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 ABHD3Q8WU67 409 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 DCPSQ96C86 337 aaKnown RBP2.82□□□□□ -1.96
XRN1-213ENST00000489241 RCN3Q96D15 328 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 UBE2E2Q96LR5 201 aa2.82□□□□□ -1.96
XRN1-213ENST00000489241 HINT2Q9BX68 163 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms