RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 ZNF418Q8TF45 676 aaPredicted RBP19.35■□□□□ 0.69
COL9A3-213ENST00000489045 TSSK6Q9BXA6 273 aa19.35■□□□□ 0.69
COL9A3-213ENST00000489045 C7orf69Q9H7B7 122 aa19.35■□□□□ 0.69
COL9A3-213ENST00000489045 REEP1Q9H902 201 aa19.35■□□□□ 0.69
COL9A3-213ENST00000489045 OPN4Q9UHM6 478 aa19.35■□□□□ 0.69
COL9A3-213ENST00000489045 SAMHD1Q9Y3Z3 626 aaKnown RBP19.35■□□□□ 0.69
COL9A3-213ENST00000489045 IGHV3-64DA0A0J9YX35 117 aa19.34■□□□□ 0.69
COL9A3-213ENST00000489045 F5H5P2 479 aa19.34■□□□□ 0.69
COL9A3-213ENST00000489045 IFNL4K9M1U5 179 aa19.34■□□□□ 0.69
COL9A3-213ENST00000489045 M0R135 149 aa19.34■□□□□ 0.69
COL9A3-213ENST00000489045 SOX14O95416 240 aa19.34■□□□□ 0.69
COL9A3-213ENST00000489045 T-ENOLP0DO92 83 aa19.34■□□□□ 0.69
COL9A3-213ENST00000489045 PSKH1P11801 424 aa19.34■□□□□ 0.69
COL9A3-213ENST00000489045 MDH2P40926 338 aaKnown RBP19.34■□□□□ 0.69
COL9A3-213ENST00000489045 TPTEP56180 551 aa19.34■□□□□ 0.69
COL9A3-213ENST00000489045 MALLQ13021 153 aa19.34■□□□□ 0.69
COL9A3-213ENST00000489045 MICAQ29983 383 aa19.34■□□□□ 0.69
COL9A3-213ENST00000489045 FAM98BQ52LJ0 330 aaKnown RBP19.34■□□□□ 0.69
COL9A3-213ENST00000489045 OR4Q3Q8NH05 313 aa19.34■□□□□ 0.69
COL9A3-213ENST00000489045 NANPQ8TBE9 248 aa19.34■□□□□ 0.69
COL9A3-213ENST00000489045 ZNF799Q96GE5 643 aa19.34■□□□□ 0.69
COL9A3-213ENST00000489045 TMEM100Q9NV29 134 aa19.34■□□□□ 0.69
COL9A3-213ENST00000489045 ARMC1Q9NVT9 282 aa19.34■□□□□ 0.69
COL9A3-213ENST00000489045 PRPF19Q9UMS4 504 aaKnown RBP19.34■□□□□ 0.69
COL9A3-213ENST00000489045 COMMD3-BMI1R4GMX3 469 aa19.34■□□□□ 0.69
COL9A3-213ENST00000489045 PPIAL4EA0A075B759 164 aa19.33■□□□□ 0.68
COL9A3-213ENST00000489045 PPIAL4CA0A0B4J2A2 164 aa19.33■□□□□ 0.68
COL9A3-213ENST00000489045 F5H0A9 414 aaPredicted RBP19.33■□□□□ 0.68
COL9A3-213ENST00000489045 PPIAL4DF5H284 164 aa19.33■□□□□ 0.68
COL9A3-213ENST00000489045 CYB5R3P00387 301 aaPredicted RBP19.33■□□□□ 0.68
COL9A3-213ENST00000489045 HLA-DPB1P04440 258 aa19.33■□□□□ 0.68
COL9A3-213ENST00000489045 PPIAL4FP0DN26 164 aa19.33■□□□□ 0.68
COL9A3-213ENST00000489045 SLC6A9P48067 706 aa19.33■□□□□ 0.68
COL9A3-213ENST00000489045 CRMP1Q14194 572 aa19.33■□□□□ 0.68
COL9A3-213ENST00000489045 MOGAT3Q86VF5 341 aa19.33■□□□□ 0.68
COL9A3-213ENST00000489045 MUC20Q8N307 709 aaPredicted RBP19.33■□□□□ 0.68
COL9A3-213ENST00000489045 SPTSSAQ969W0 71 aa19.33■□□□□ 0.68
COL9A3-213ENST00000489045 SLCO4A1Q96BD0 722 aa19.33■□□□□ 0.68
COL9A3-213ENST00000489045 CCDC124Q96CT7 223 aaKnown RBP19.33■□□□□ 0.68
COL9A3-213ENST00000489045 ASB9Q96DX5 294 aa19.33■□□□□ 0.68
COL9A3-213ENST00000489045 RBM4Q9BWF3 364 aaKnown RBP19.33■□□□□ 0.68
COL9A3-213ENST00000489045 DGCR6LQ9BY27 220 aa19.33■□□□□ 0.68
COL9A3-213ENST00000489045 MMP26Q9NRE1 261 aa19.33■□□□□ 0.68
COL9A3-213ENST00000489045 DDX28Q9NUL7 540 aaKnown RBP19.33■□□□□ 0.68
COL9A3-213ENST00000489045 A0A1B0GWJ7 208 aa19.32■□□□□ 0.68
COL9A3-213ENST00000489045 CEACAM18A8MTB9 384 aa19.32■□□□□ 0.68
COL9A3-213ENST00000489045 ZNF205O95201 554 aa19.32■□□□□ 0.68
COL9A3-213ENST00000489045 GYPBP06028 91 aa19.32■□□□□ 0.68
COL9A3-213ENST00000489045 PGAP1Q75T13 922 aa19.32■□□□□ 0.68
COL9A3-213ENST00000489045 OR2T33Q8NG76 320 aa19.32■□□□□ 0.68
COL9A3-213ENST00000489045 POP5Q969H6 163 aaKnown RBP19.32■□□□□ 0.68
COL9A3-213ENST00000489045 CLPTM1LQ96KA5 538 aa19.32■□□□□ 0.68
COL9A3-213ENST00000489045 LRGUKQ96M69 825 aa19.32■□□□□ 0.68
COL9A3-213ENST00000489045 BAIAP2Q9UQB8 552 aa19.32■□□□□ 0.68
COL9A3-213ENST00000489045 TENM1Q9UKZ4 2725 aa19.31■□□□□ 0.68
COL9A3-213ENST00000489045 DOCK11Q5JSL3 2073 aa19.31■□□□□ 0.68
COL9A3-213ENST00000489045 A8MXK9 166 aa19.31■□□□□ 0.68
COL9A3-213ENST00000489045 TRAPPC2LH3BP13 241 aa19.31■□□□□ 0.68
COL9A3-213ENST00000489045 FSHBP01225 129 aa19.31■□□□□ 0.68
COL9A3-213ENST00000489045 SPARCP09486 303 aa19.31■□□□□ 0.68
COL9A3-213ENST00000489045 RAP2AP10114 183 aa19.31■□□□□ 0.68
COL9A3-213ENST00000489045 HILS1P60008 231 aa19.31■□□□□ 0.68
COL9A3-213ENST00000489045 USP43Q70EL4 1123 aa19.31■□□□□ 0.68
COL9A3-213ENST00000489045 MRPL21Q7Z2W9 205 aaKnown RBP19.31■□□□□ 0.68
COL9A3-213ENST00000489045 DCXRQ7Z4W1 244 aa19.31■□□□□ 0.68
COL9A3-213ENST00000489045 DEFB108BQ8NET1 73 aa19.31■□□□□ 0.68
COL9A3-213ENST00000489045 OR10G2Q8NGC3 310 aa19.31■□□□□ 0.68
COL9A3-213ENST00000489045 ZFAND2BQ8WV99 257 aa19.31■□□□□ 0.68
COL9A3-213ENST00000489045 SLC6A7Q99884 636 aa19.31■□□□□ 0.68
COL9A3-213ENST00000489045 NMNAT2Q9BZQ4 307 aa19.31■□□□□ 0.68
COL9A3-213ENST00000489045 POLR3KQ9Y2Y1 108 aaPredicted RBP19.31■□□□□ 0.68
COL9A3-213ENST00000489045 CLUP10909 449 aa19.3■□□□□ 0.68
COL9A3-213ENST00000489045 SPI1P17947 270 aa19.3■□□□□ 0.68
COL9A3-213ENST00000489045 ANOS1P23352 680 aa19.3■□□□□ 0.68
COL9A3-213ENST00000489045 FMO3P31513 532 aa19.3■□□□□ 0.68
COL9A3-213ENST00000489045 OTX1P32242 354 aaPredicted RBP19.3■□□□□ 0.68
COL9A3-213ENST00000489045 ENTPD1P49961 510 aa19.3■□□□□ 0.68
COL9A3-213ENST00000489045 SLC25A1P53007 311 aa19.3■□□□□ 0.68
COL9A3-213ENST00000489045 SNAI3Q3KNW1 292 aa19.3■□□□□ 0.68
COL9A3-213ENST00000489045 ESCO2Q56NI9 601 aa19.3■□□□□ 0.68
COL9A3-213ENST00000489045 ZNF511Q8NB15 262 aa19.3■□□□□ 0.68
COL9A3-213ENST00000489045 SPRYD4Q8WW59 207 aaPredicted RBP19.3■□□□□ 0.68
COL9A3-213ENST00000489045 NIPSNAP1Q9BPW8 284 aa19.3■□□□□ 0.68
COL9A3-213ENST00000489045 COPS4Q9BT78 406 aa19.3■□□□□ 0.68
COL9A3-213ENST00000489045 TAS2R1Q9NYW7 299 aa19.3■□□□□ 0.68
COL9A3-213ENST00000489045 LRRC30A6NM36 301 aa19.29■□□□□ 0.68
COL9A3-213ENST00000489045 HAX1O00165 279 aa19.29■□□□□ 0.68
COL9A3-213ENST00000489045 IFNGP01579 166 aa19.29■□□□□ 0.68
COL9A3-213ENST00000489045 PMELP40967 661 aa19.29■□□□□ 0.68
COL9A3-213ENST00000489045 ZNF92Q03936 586 aa19.29■□□□□ 0.68
COL9A3-213ENST00000489045 MAB21L1Q13394 359 aa19.29■□□□□ 0.68
COL9A3-213ENST00000489045 PCK2Q16822 640 aa19.29■□□□□ 0.68
COL9A3-213ENST00000489045 ZNF181Q2M3W8 571 aa19.29■□□□□ 0.68
COL9A3-213ENST00000489045 DRAM2Q6UX65 266 aa19.29■□□□□ 0.68
COL9A3-213ENST00000489045 OR6K6Q8NGW6 343 aa19.29■□□□□ 0.68
COL9A3-213ENST00000489045 OR2AE1Q8NHA4 323 aa19.29■□□□□ 0.68
COL9A3-213ENST00000489045 SLAMF6Q96DU3 332 aa19.29■□□□□ 0.68
COL9A3-213ENST00000489045 SUCNR1Q9BXA5 334 aa19.29■□□□□ 0.68
COL9A3-213ENST00000489045 C1orf21Q9H246 121 aa19.29■□□□□ 0.68
COL9A3-213ENST00000489045 TMEM165Q9HC07 324 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms