RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 CD55P08174 381 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 HSD11B1P28845 292 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 DAPP51397 102 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 GRB2P62993 217 aaKnown RBP12.14□□□□□ -0.47
BRCA1-218ENST00000489037 HLXQ14774 488 aaPredicted RBP12.14□□□□□ -0.47
BRCA1-218ENST00000489037 TRIP10Q15642 601 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 PCK2Q16822 640 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 RSPO1Q2MKA7 263 aaPredicted RBP12.14□□□□□ -0.47
BRCA1-218ENST00000489037 KRTAP27-1Q3LI81 207 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 TMEM255AQ5JRV8 349 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 SLC35D3Q5M8T2 416 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 LINC01590Q5TEZ4 76 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 TMEM236Q5W0B7 351 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 OR2T2Q6IF00 324 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 COLCA1Q6ZS62 124 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 MRPL21Q7Z2W9 205 aaKnown RBP12.14□□□□□ -0.47
BRCA1-218ENST00000489037 CPOQ8IVL8 374 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 OR5AS1Q8N127 324 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 ZNF283Q8N7M2 679 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 OR8G5Q8NG78 346 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 OR13G1Q8NGZ3 307 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 LRTOMTQ8WZ04 291 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 KCNJ15Q99712 375 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 TOR3AQ9H497 397 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 RP2O75695 350 aa12.13□□□□□ -0.47
BRCA1-218ENST00000489037 PRKXP51817 358 aa12.13□□□□□ -0.47
BRCA1-218ENST00000489037 MVKQ03426 396 aa12.13□□□□□ -0.47
BRCA1-218ENST00000489037 PTGES3Q15185 160 aaKnown RBP12.13□□□□□ -0.47
BRCA1-218ENST00000489037 CHRFAM7AQ494W8 412 aa12.13□□□□□ -0.47
BRCA1-218ENST00000489037 PGAP1Q75T13 922 aa12.13□□□□□ -0.47
BRCA1-218ENST00000489037 CXXC5Q7LFL8 322 aaKnown RBP12.13□□□□□ -0.47
BRCA1-218ENST00000489037 DPY19L4Q7Z388 723 aa12.13□□□□□ -0.47
BRCA1-218ENST00000489037 NAA40Q86UY6 237 aa12.13□□□□□ -0.47
BRCA1-218ENST00000489037 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-218ENST00000489037 LINC01356Q8N9X3 169 aa12.13□□□□□ -0.47
BRCA1-218ENST00000489037 OR10S1Q8NGN2 331 aa12.13□□□□□ -0.47
BRCA1-218ENST00000489037 SPRYD4Q8WW59 207 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-218ENST00000489037 MSI2Q96DH6 328 aaKnown RBP12.13□□□□□ -0.47
BRCA1-218ENST00000489037 ZMYND19Q96E35 227 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-218ENST00000489037 CENPNQ96H22 339 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-218ENST00000489037 NARFLQ9H6Q4 476 aa12.13□□□□□ -0.47
BRCA1-218ENST00000489037 TMEM100Q9NV29 134 aa12.13□□□□□ -0.47
BRCA1-218ENST00000489037 H2AFY2Q9P0M6 372 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-218ENST00000489037 LPAR3Q9UBY5 353 aa12.13□□□□□ -0.47
BRCA1-218ENST00000489037 IL19Q9UHD0 177 aa12.13□□□□□ -0.47
BRCA1-218ENST00000489037 NOP16Q9Y3C1 178 aaKnown RBP12.13□□□□□ -0.47
BRCA1-218ENST00000489037 N6AMT1Q9Y5N5 214 aa12.13□□□□□ -0.47
BRCA1-218ENST00000489037 IQCF6A8MYZ5 107 aa12.12□□□□□ -0.47
BRCA1-218ENST00000489037 HNF1AP20823 631 aa12.12□□□□□ -0.47
BRCA1-218ENST00000489037 SRP9P49458 86 aaKnown RBP12.12□□□□□ -0.47
BRCA1-218ENST00000489037 RAD23AP54725 363 aa12.12□□□□□ -0.47
BRCA1-218ENST00000489037 CDH15P55291 814 aa12.12□□□□□ -0.47
BRCA1-218ENST00000489037 GK2Q14410 553 aaPredicted RBP12.12□□□□□ -0.47
BRCA1-218ENST00000489037 LCN1P1Q5VSP4 162 aa12.12□□□□□ -0.47
BRCA1-218ENST00000489037 ZFP1Q6P2D0 407 aa12.12□□□□□ -0.47
BRCA1-218ENST00000489037 SPATC1Q76KD6 591 aa12.12□□□□□ -0.47
BRCA1-218ENST00000489037 ZNF454Q8N9F8 522 aa12.12□□□□□ -0.47
BRCA1-218ENST00000489037 BHLHE23Q8NDY6 225 aa12.12□□□□□ -0.47
BRCA1-218ENST00000489037 CLDND2Q8NHS1 167 aa12.12□□□□□ -0.47
BRCA1-218ENST00000489037 ST7LQ8TDW4 575 aa12.12□□□□□ -0.47
BRCA1-218ENST00000489037 RAB3IPQ96QF0 476 aaPredicted RBP12.12□□□□□ -0.47
BRCA1-218ENST00000489037 ABHD6Q9BV23 337 aa12.12□□□□□ -0.47
BRCA1-218ENST00000489037 BEX2Q9BXY8 128 aa12.12□□□□□ -0.47
BRCA1-218ENST00000489037 SHARPINQ9H0F6 387 aa12.12□□□□□ -0.47
BRCA1-218ENST00000489037 GABARAPL1Q9H0R8 117 aa12.12□□□□□ -0.47
BRCA1-218ENST00000489037 SEMA6AQ9H2E6 1030 aa12.12□□□□□ -0.47
BRCA1-218ENST00000489037 MARCH7Q9H992 704 aa12.12□□□□□ -0.47
BRCA1-218ENST00000489037 TMEM160Q9NX00 188 aa12.12□□□□□ -0.47
BRCA1-218ENST00000489037 TREM2Q9NZC2 230 aa12.12□□□□□ -0.47
BRCA1-218ENST00000489037 CDC42EP3Q9UKI2 254 aa12.12□□□□□ -0.47
BRCA1-218ENST00000489037 JMJD1CQ15652 2540 aa12.12□□□□□ -0.47
BRCA1-218ENST00000489037 ABCA2Q9BZC7 2435 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 WNK2Q9Y3S1 2297 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 GGT3PA6NGU5 568 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 B4DSR2 109 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 IFNL4K9M1U5 179 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 XRCC2O43543 280 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 ANXA2P07355 339 aaKnown RBP12.11□□□□□ -0.47
BRCA1-218ENST00000489037 LYNP07948 512 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 H2BFMP0C1H6 154 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 ANPEPP15144 967 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 PCMT1P22061 227 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 IGFBP5P24593 272 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 OTX1P32242 354 aaPredicted RBP12.11□□□□□ -0.47
BRCA1-218ENST00000489037 ACTR3P61158 418 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 APOFQ13790 326 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 KRTAP21-3Q3LHN1 58 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 AVPI1Q5T686 147 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 KDM4DQ6B0I6 523 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 Q6ZR03 302 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 RHOUQ7L0Q8 258 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 TIGD4Q8IY51 512 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 THEM6Q8WUY1 208 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 ITLN1Q8WWA0 313 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 PYDC1Q8WXC3 89 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 RAB39BQ96DA2 213 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 OR2V2Q96R30 315 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 OSBPL10Q9BXB5 764 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 SLC22A4Q9H015 551 aa12.11□□□□□ -0.47
BRCA1-218ENST00000489037 OPA3Q9H6K4 179 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms