RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 LRBAP50851 2863 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 NOTCH2Q04721 2471 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 SPG11Q96JI7 2443 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 A0A1W2PPW3 197 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 A0A1W2PQL4 384 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-224ENST00000488927 H7C417 338 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 XRCC2O43543 280 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 SULT1C4O75897 302 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 KRT8P05787 483 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 ERCC1P07992 297 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-224ENST00000488927 RAC2P15153 192 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 SELEP16581 610 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 LIPAP38571 399 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 PSMA6P60900 246 aaKnown RBP13.7□□□□□ -0.22
HDAC7-224ENST00000488927 ERVS71-1P61550 626 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 CSNK2BP67870 215 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 CDK5R2Q13319 367 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 ZNF829Q3KNS6 432 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-224ENST00000488927 SPATA46Q5T0L3 261 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 FBXW12Q6X9E4 464 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 EGFL6Q8IUX8 553 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 LRRC75A-AS1Q8N1F1 130 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 ACBD7Q8N6N7 88 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 FBLIM1Q8WUP2 373 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 SNX33Q8WV41 574 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 LGALS12Q96DT0 336 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 SYT3Q9BQG1 590 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 CACNG6Q9BXT2 260 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 ANKRD60Q9BZ19 345 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 GSX2Q9BZM3 304 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 MS4A5Q9H3V2 200 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 DYNLRB1Q9NP97 96 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 CYSLTR2Q9NS75 346 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 ZNF701Q9NV72 531 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-224ENST00000488927 RAB26Q9ULW5 256 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 FZR1Q9UM11 496 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 NAV2Q8IVL1 2488 aa13.7□□□□□ -0.22
HDAC7-224ENST00000488927 TMEM129A0AVI4 362 aa13.69□□□□□ -0.22
HDAC7-224ENST00000488927 DAPL1A0PJW8 107 aa13.69□□□□□ -0.22
HDAC7-224ENST00000488927 J3QRE1 110 aa13.69□□□□□ -0.22
HDAC7-224ENST00000488927 M0R233 179 aa13.69□□□□□ -0.22
HDAC7-224ENST00000488927 APOL3O95236 402 aa13.69□□□□□ -0.22
HDAC7-224ENST00000488927 ANXA2P07355 339 aaKnown RBP13.69□□□□□ -0.22
HDAC7-224ENST00000488927 CFL1P23528 166 aaKnown RBP13.69□□□□□ -0.22
HDAC7-224ENST00000488927 ZNF121P58317 390 aaPredicted RBP13.69□□□□□ -0.22
HDAC7-224ENST00000488927 ACTA2P62736 377 aa13.69□□□□□ -0.22
HDAC7-224ENST00000488927 ACTG2P63267 376 aa13.69□□□□□ -0.22
HDAC7-224ENST00000488927 SNCBQ16143 134 aa13.69□□□□□ -0.22
HDAC7-224ENST00000488927 NKPD1Q17RQ9 610 aa13.69□□□□□ -0.22
HDAC7-224ENST00000488927 MSMPQ1L6U9 139 aa13.69□□□□□ -0.22
HDAC7-224ENST00000488927 ZMAT1Q5H9K5 638 aa13.69□□□□□ -0.22
HDAC7-224ENST00000488927 PLEKHG7Q6ZR37 379 aa13.69□□□□□ -0.22
HDAC7-224ENST00000488927 FAM220AQ7Z4H9 259 aa13.69□□□□□ -0.22
HDAC7-224ENST00000488927 KCTD20Q7Z5Y7 419 aa13.69□□□□□ -0.22
HDAC7-224ENST00000488927 NAA40Q86UY6 237 aa13.69□□□□□ -0.22
HDAC7-224ENST00000488927 HAVCR1Q96D42 359 aa13.69□□□□□ -0.22
HDAC7-224ENST00000488927 TBX5Q99593 518 aa13.69□□□□□ -0.22
HDAC7-224ENST00000488927 OR10A2Q9H208 303 aa13.69□□□□□ -0.22
HDAC7-224ENST00000488927 RGCCQ9H4X1 137 aa13.69□□□□□ -0.22
HDAC7-224ENST00000488927 MOB1AQ9H8S9 216 aa13.69□□□□□ -0.22
HDAC7-224ENST00000488927 AMBNQ9NP70 447 aa13.69□□□□□ -0.22
HDAC7-224ENST00000488927 TMEM269A0A1B0GVZ9 245 aa13.68□□□□□ -0.22
HDAC7-224ENST00000488927 PLSCR5A0PG75 271 aa13.68□□□□□ -0.22
HDAC7-224ENST00000488927 METTL15A6NJ78 407 aa13.68□□□□□ -0.22
HDAC7-224ENST00000488927 IGHA1P01876 353 aa13.68□□□□□ -0.22
HDAC7-224ENST00000488927 TACSTD2P09758 323 aa13.68□□□□□ -0.22
HDAC7-224ENST00000488927 KITLGP21583 273 aa13.68□□□□□ -0.22
HDAC7-224ENST00000488927 MYF6P23409 242 aa13.68□□□□□ -0.22
HDAC7-224ENST00000488927 DCKP27707 260 aa13.68□□□□□ -0.22
HDAC7-224ENST00000488927 MPV17P39210 176 aa13.68□□□□□ -0.22
HDAC7-224ENST00000488927 MMP16P51512 607 aa13.68□□□□□ -0.22
HDAC7-224ENST00000488927 MED21Q13503 144 aa13.68□□□□□ -0.22
HDAC7-224ENST00000488927 SMN1Q16637 294 aaKnown RBP13.68□□□□□ -0.22
HDAC7-224ENST00000488927 LRP11Q86VZ4 500 aa13.68□□□□□ -0.22
HDAC7-224ENST00000488927 RFLNBQ8N5W9 214 aa13.68□□□□□ -0.22
HDAC7-224ENST00000488927 CMBLQ96DG6 245 aa13.68□□□□□ -0.22
HDAC7-224ENST00000488927 PGAM5Q96HS1 289 aa13.68□□□□□ -0.22
HDAC7-224ENST00000488927 ZNF184Q99676 751 aaPredicted RBP13.68□□□□□ -0.22
HDAC7-224ENST00000488927 FOXC2Q99958 501 aa13.68□□□□□ -0.22
HDAC7-224ENST00000488927 RAB1BQ9H0U4 201 aa13.68□□□□□ -0.22
HDAC7-224ENST00000488927 Q9H521 79 aa13.68□□□□□ -0.22
HDAC7-224ENST00000488927 BARX1Q9HBU1 254 aaPredicted RBP13.68□□□□□ -0.22
HDAC7-224ENST00000488927 PLCXD1Q9NUJ7 323 aa13.68□□□□□ -0.22
HDAC7-224ENST00000488927 PTTG3PQ9NZH4 202 aa13.68□□□□□ -0.22
HDAC7-224ENST00000488927 TAAR3PQ9P1P4 343 aa13.68□□□□□ -0.22
HDAC7-224ENST00000488927 ZNF391Q9UJN7 358 aa13.68□□□□□ -0.22
HDAC7-224ENST00000488927 ANKRD17O75179 2603 aaKnown RBP13.68□□□□□ -0.22
HDAC7-224ENST00000488927 POLQO75417 2590 aa13.68□□□□□ -0.22
HDAC7-224ENST00000488927 AKAP6Q13023 2319 aa13.67□□□□□ -0.22
HDAC7-224ENST00000488927 EFCAB10A6NFE3 127 aa13.67□□□□□ -0.22
HDAC7-224ENST00000488927 PSMD9O00233 223 aa13.67□□□□□ -0.22
HDAC7-224ENST00000488927 TBX1O43435 398 aa13.67□□□□□ -0.22
HDAC7-224ENST00000488927 TIMM8AO60220 97 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-224ENST00000488927 CLPTM1O96005 669 aa13.67□□□□□ -0.22
HDAC7-224ENST00000488927 SLC2A1P11166 492 aa13.67□□□□□ -0.22
HDAC7-224ENST00000488927 PIPP12273 146 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-224ENST00000488927 CDKN1AP38936 164 aa13.67□□□□□ -0.22
HDAC7-224ENST00000488927 PTH2RP49190 550 aa13.67□□□□□ -0.22
HDAC7-224ENST00000488927 ZNF85Q03923 595 aa13.67□□□□□ -0.22
HDAC7-224ENST00000488927 PSG7Q13046 419 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms