RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 GCH1P30793 250 aa14.64□□□□□ -0.07
SHROOM1-205ENST00000488072 ZNF85Q03923 595 aa14.64□□□□□ -0.07
SHROOM1-205ENST00000488072 ZNF91Q05481 1191 aa14.64□□□□□ -0.07
SHROOM1-205ENST00000488072 MFGE8Q08431 387 aaPredicted RBP14.64□□□□□ -0.07
SHROOM1-205ENST00000488072 MBNL2Q5VZF2 373 aaKnown RBP14.64□□□□□ -0.07
SHROOM1-205ENST00000488072 ZNF322Q6U7Q0 402 aaPredicted RBP14.64□□□□□ -0.07
SHROOM1-205ENST00000488072 Q6ZR03 302 aa14.64□□□□□ -0.07
SHROOM1-205ENST00000488072 TGIF2LYQ8IUE0 185 aa14.64□□□□□ -0.07
SHROOM1-205ENST00000488072 ZNF454Q8N9F8 522 aa14.64□□□□□ -0.07
SHROOM1-205ENST00000488072 SPTSSAQ969W0 71 aa14.64□□□□□ -0.07
SHROOM1-205ENST00000488072 APOBEC3DQ96AK3 386 aaPredicted RBP14.64□□□□□ -0.07
SHROOM1-205ENST00000488072 RDH12Q96NR8 316 aa14.64□□□□□ -0.07
SHROOM1-205ENST00000488072 DCLRE1CQ96SD1 692 aaKnown RBP14.64□□□□□ -0.07
SHROOM1-205ENST00000488072 HAO2Q9NYQ3 351 aa14.64□□□□□ -0.07
SHROOM1-205ENST00000488072 MRM2Q9UI43 246 aaKnown RBP14.64□□□□□ -0.07
SHROOM1-205ENST00000488072 MYRFQ9Y2G1 1151 aa14.64□□□□□ -0.07
SHROOM1-205ENST00000488072 OTOGQ6ZRI0 2925 aa14.64□□□□□ -0.07
SHROOM1-205ENST00000488072 ARID1AO14497 2285 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 CREBBPQ92793 2442 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 H7C417 338 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 TBX1O43435 398 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 SPRY3O43610 288 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 PNPP00491 289 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 IGHV3-13P01766 116 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 HPXP02790 462 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 ANXA2P07355 339 aaKnown RBP14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 PAX1P15863 534 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 HSD11B1P28845 292 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 CAPGP40121 348 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 MMP15P51511 669 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 ISL1P61371 349 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 GK2Q14410 553 aaPredicted RBP14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 NKPD1Q17RQ9 610 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 SLC25A30Q5SVS4 291 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 USP51Q70EK9 711 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 KRT77Q7Z794 578 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 CIARTQ8N365 385 aaPredicted RBP14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 ZNF525Q8N782 197 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 SGK3Q96BR1 496 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 OR8B4Q96RC9 309 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 PPP1R3EQ9H7J1 279 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 CLN6Q9NWW5 311 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 PURGQ9UJV8 347 aaKnown RBP14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 IKZF2Q9UKS7 526 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 PMF1-BGLAPU3KQ54 211 aa14.63□□□□□ -0.07
SHROOM1-205ENST00000488072 VPS13CQ709C8 3753 aa14.62□□□□□ -0.07
SHROOM1-205ENST00000488072 IGHV3-64DA0A0J9YX35 117 aa14.62□□□□□ -0.07
SHROOM1-205ENST00000488072 VSTM5A8MXK1 200 aa14.62□□□□□ -0.07
SHROOM1-205ENST00000488072 ZNF670-ZNF695F2Z2N8 137 aa14.62□□□□□ -0.07
SHROOM1-205ENST00000488072 H0YL77 283 aa14.62□□□□□ -0.07
SHROOM1-205ENST00000488072 J3QRE1 110 aa14.62□□□□□ -0.07
SHROOM1-205ENST00000488072 M0R233 179 aa14.62□□□□□ -0.07
SHROOM1-205ENST00000488072 DBTP11182 482 aaKnown RBP14.62□□□□□ -0.07
SHROOM1-205ENST00000488072 MTNR1AP48039 350 aa14.62□□□□□ -0.07
SHROOM1-205ENST00000488072 PPOXP50336 477 aa14.62□□□□□ -0.07
SHROOM1-205ENST00000488072 TSTQ16762 297 aaKnown RBP14.62□□□□□ -0.07
SHROOM1-205ENST00000488072 GFOD2Q3B7J2 385 aa14.62□□□□□ -0.07
SHROOM1-205ENST00000488072 ARL9Q6T311 187 aa14.62□□□□□ -0.07
SHROOM1-205ENST00000488072 DRAM2Q6UX65 266 aa14.62□□□□□ -0.07
SHROOM1-205ENST00000488072 BHLHE23Q8NDY6 225 aa14.62□□□□□ -0.07
SHROOM1-205ENST00000488072 TFAP2CQ92754 450 aa14.62□□□□□ -0.07
SHROOM1-205ENST00000488072 DVL3Q92997 716 aaPredicted RBP14.62□□□□□ -0.07
SHROOM1-205ENST00000488072 HAVCR1Q96D42 359 aa14.62□□□□□ -0.07
SHROOM1-205ENST00000488072 Q96MF0 132 aa14.62□□□□□ -0.07
SHROOM1-205ENST00000488072 TREM2Q9NZC2 230 aa14.62□□□□□ -0.07
SHROOM1-205ENST00000488072 EDARQ9UNE0 448 aa14.62□□□□□ -0.07
SHROOM1-205ENST00000488072 TIMM8AO60220 97 aaPredicted RBP14.61□□□□□ -0.07
SHROOM1-205ENST00000488072 RPP14O95059 124 aaKnown RBP14.61□□□□□ -0.07
SHROOM1-205ENST00000488072 IGHV1-46P01743 117 aa14.61□□□□□ -0.07
SHROOM1-205ENST00000488072 COL8A2P25067 703 aa14.61□□□□□ -0.07
SHROOM1-205ENST00000488072 ATP6V1E1P36543 226 aa14.61□□□□□ -0.07
SHROOM1-205ENST00000488072 PSMB10P40306 273 aa14.61□□□□□ -0.07
SHROOM1-205ENST00000488072 EVX1P49640 407 aa14.61□□□□□ -0.07
SHROOM1-205ENST00000488072 RGS6P49758 472 aa14.61□□□□□ -0.07
SHROOM1-205ENST00000488072 GRB2P62993 217 aaKnown RBP14.61□□□□□ -0.07
SHROOM1-205ENST00000488072 RIPK1Q13546 671 aa14.61□□□□□ -0.07
SHROOM1-205ENST00000488072 TP53I3Q53FA7 332 aa14.61□□□□□ -0.07
SHROOM1-205ENST00000488072 ZNF684Q5T5D7 378 aa14.61□□□□□ -0.07
SHROOM1-205ENST00000488072 TTC23Q5W5X9 447 aa14.61□□□□□ -0.07
SHROOM1-205ENST00000488072 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.61□□□□□ -0.07
SHROOM1-205ENST00000488072 LRRC75A-AS1Q8N1F1 130 aa14.61□□□□□ -0.07
SHROOM1-205ENST00000488072 MAPK1IP1LQ8NDC0 245 aa14.61□□□□□ -0.07
SHROOM1-205ENST00000488072 RNF166Q96A37 237 aaPredicted RBP14.61□□□□□ -0.07
SHROOM1-205ENST00000488072 TRMT61AQ96FX7 289 aaKnown RBP14.61□□□□□ -0.07
SHROOM1-205ENST00000488072 LYZL4Q96KX0 146 aa14.61□□□□□ -0.07
SHROOM1-205ENST00000488072 PCDHGB5Q9Y5G0 923 aa14.61□□□□□ -0.07
SHROOM1-205ENST00000488072 CACNG2Q9Y698 323 aa14.61□□□□□ -0.07
SHROOM1-205ENST00000488072 C17orf100A8MU93 164 aa14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 H3BSH0 61 aa14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 SRSF10O75494 262 aaKnown RBP14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 KITLGP21583 273 aa14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 SLC15A1P46059 708 aa14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 CCL8P80075 99 aa14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 MVKQ03426 396 aa14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 CDK5R2Q13319 367 aa14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 TNK1Q13470 666 aa14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 CARTPTQ16568 116 aa14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 MEDAGQ5VYS4 303 aa14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 IZUMO2Q6UXV1 221 aa14.6□□□□□ -0.07
SHROOM1-205ENST00000488072 FBXW12Q6X9E4 464 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms