RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 TMEM9BQ9NQ34 198 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 PSMC3IPQ9P2W1 217 aaPredicted RBP0.94□□□□□ -2.26
SMC4-219ENST00000487747 PISDQ9UG56 409 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 LGALS13Q9UHV8 139 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 LAMB2P55268 1798 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 IGHV1-3A0A0C4DH29 117 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 A0A0J9YXV3 536 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 NCBP2LA6PVI3 153 aaKnown RBP0.93□□□□□ -2.26
SMC4-219ENST00000487747 H7C417 338 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 K7EMT4 169 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 RAB29O14966 203 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 FKBP6O75344 327 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 SERPINE2P07093 398 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 ERGP11308 486 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 PRPHP41219 470 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 TNNT2P45379 298 aaPredicted RBP0.93□□□□□ -2.26
SMC4-219ENST00000487747 VSX2P58304 361 aaPredicted RBP0.93□□□□□ -2.26
SMC4-219ENST00000487747 PGGHGQ32M88 737 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 PCOTHQ58A44 107 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 GPR107Q5VW38 600 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 RNASEKQ6P5S7 137 aaKnown RBP0.93□□□□□ -2.26
SMC4-219ENST00000487747 TMEM107Q6UX40 140 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 NPSR1Q6W5P4 371 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 SPNS3Q6ZMD2 512 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 RGS9BPQ6ZS82 235 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 TBC1D21Q8IYX1 336 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 IQCKQ8N0W5 287 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 OR5T1Q8NG75 326 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 OR13C2Q8NGS9 318 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 TMEM230Q96A57 120 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 SLC29A1Q99808 456 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 MICU1Q9BPX6 476 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 CHCHD7Q9BUK0 85 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 MTFP1Q9UDX5 166 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 ISY1Q9ULR0 285 aaKnown RBP0.93□□□□□ -2.26
SMC4-219ENST00000487747 ASB3Q9Y575 518 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 USP47Q96K76 1375 aa0.93□□□□□ -2.26
SMC4-219ENST00000487747 TRAV19A0A0A6YYK7 116 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 A0A1B0GUH1 482 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 LYRM9A8MSI8 78 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 SMKR1H3BMG3 65 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 SCAMP2O15127 329 aaKnown RBP0.92□□□□□ -2.26
SMC4-219ENST00000487747 NVLO15381 856 aaKnown RBP0.92□□□□□ -2.26
SMC4-219ENST00000487747 SERPINA3P01011 423 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 EIF4EP06730 217 aaKnown RBP0.92□□□□□ -2.26
SMC4-219ENST00000487747 ACSM4P0C7M7 580 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 GGT1P19440 569 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 U2AF2P26368 475 aaKnown RBP eCLIP0.92□□□□□ -2.268e-7■■■■■ 49.4
SMC4-219ENST00000487747 ACLYP53396 1101 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 CDKN2DP55273 166 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 RPL23P62829 140 aaKnown RBP0.92□□□□□ -2.26
SMC4-219ENST00000487747 SP4Q02446 784 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 SIGLEC14Q08ET2 396 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 CHRNA6Q15825 494 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 NBPF5PQ86XG9 351 aaPredicted RBP0.92□□□□□ -2.26
SMC4-219ENST00000487747 NKAIN4Q8IVV8 208 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 UBE2J2Q8N2K1 259 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 LRRC75AQ8NAA5 344 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 CHST4Q8NCG5 386 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 OR7G2Q8NG99 324 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 OR11H7Q8NGC8 314 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 OR4M1Q8NGD0 313 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 OR9K2Q8NGE7 335 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 OR5B3Q8NH48 314 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 KCNG3Q8TAE7 436 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 KIFAP3Q92845 792 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 OR5B12Q96R08 314 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 GCOM2Q9BZD3 368 aaPredicted RBP0.92□□□□□ -2.26
SMC4-219ENST00000487747 METTL7AQ9H8H3 244 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 HRASLS2Q9NWW9 162 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 SLC2A8Q9NY64 477 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 ZNF492Q9P255 531 aa0.92□□□□□ -2.26
SMC4-219ENST00000487747 TRMT112Q9UI30 125 aaKnown RBP0.92□□□□□ -2.26
SMC4-219ENST00000487747 IGHV3-49A0A0A0MS15 119 aa0.91□□□□□ -2.26
SMC4-219ENST00000487747 A6NDN8 102 aa0.91□□□□□ -2.26
SMC4-219ENST00000487747 OR5H1A6NKK0 313 aa0.91□□□□□ -2.26
SMC4-219ENST00000487747 GABRR3A8MPY1 467 aa0.91□□□□□ -2.26
SMC4-219ENST00000487747 PDZK1P1A8MUH7 402 aa0.91□□□□□ -2.26
SMC4-219ENST00000487747 RAD51CO43502 376 aa0.91□□□□□ -2.26
SMC4-219ENST00000487747 EIF4E2O60573 245 aaKnown RBP0.91□□□□□ -2.26
SMC4-219ENST00000487747 CLDN11O75508 207 aa0.91□□□□□ -2.26
SMC4-219ENST00000487747 PAHP00439 452 aa0.91□□□□□ -2.26
SMC4-219ENST00000487747 ARG1P05089 322 aa0.91□□□□□ -2.26
SMC4-219ENST00000487747 NCF2P19878 526 aaPredicted RBP0.91□□□□□ -2.26
SMC4-219ENST00000487747 CHMLP26374 656 aa0.91□□□□□ -2.26
SMC4-219ENST00000487747 TAGLN2P37802 199 aaKnown RBP0.91□□□□□ -2.26
SMC4-219ENST00000487747 RBM34P42696 430 aaKnown RBP0.91□□□□□ -2.26
SMC4-219ENST00000487747 PPIDQ08752 370 aaKnown RBP0.91□□□□□ -2.26
SMC4-219ENST00000487747 ZMYND11Q15326 602 aa0.91□□□□□ -2.26
SMC4-219ENST00000487747 C1orf185Q5T7R7 199 aa0.91□□□□□ -2.26
SMC4-219ENST00000487747 MED27Q6P2C8 311 aa0.91□□□□□ -2.26
SMC4-219ENST00000487747 CBLN2Q8IUK8 224 aa0.91□□□□□ -2.26
SMC4-219ENST00000487747 NECAB1Q8N987 351 aa0.91□□□□□ -2.26
SMC4-219ENST00000487747 OR52E2Q8NGJ4 325 aa0.91□□□□□ -2.26
SMC4-219ENST00000487747 OR10G6Q8NH81 332 aa0.91□□□□□ -2.26
SMC4-219ENST00000487747 RAB3IL1Q8TBN0 382 aa0.91□□□□□ -2.26
SMC4-219ENST00000487747 ACMSDQ8TDX5 336 aa0.91□□□□□ -2.26
SMC4-219ENST00000487747 LRRC29Q8WV35 223 aa0.91□□□□□ -2.26
SMC4-219ENST00000487747 TAS2R1Q9NYW7 299 aa0.91□□□□□ -2.26
SMC4-219ENST00000487747 PDP1Q9P0J1 537 aaPredicted RBP0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms