RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 ZADH2Q8N4Q0 377 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 FAM86B1Q8N7N1 296 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 SPERTQ8NA61 448 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 GPX8Q8TED1 209 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 GEMIN6Q8WXD5 167 aaKnown RBP2.28□□□□□ -2.04
TTC3-220ENST00000487711 ANKRD7Q92527 254 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 FRZBQ92765 325 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 SGK3Q96BR1 496 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 PRRC1Q96M27 445 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 ZNF641Q96N77 438 aaPredicted RBP2.28□□□□□ -2.04
TTC3-220ENST00000487711 NDFIP1Q9BT67 221 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 C20orf24Q9BUV8 137 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 CCDC94Q9BW85 323 aaPredicted RBP2.28□□□□□ -2.04
TTC3-220ENST00000487711 RACGAP1Q9H0H5 632 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 CYP3A43Q9HB55 503 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 NMRAL1Q9HBL8 299 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 TUBG2Q9NRH3 451 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 EXD2Q9NVH0 621 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 PSMC3IPQ9P2W1 217 aaPredicted RBP2.28□□□□□ -2.04
TTC3-220ENST00000487711 ZNF835Q9Y2P0 537 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 YTHDF2Q9Y5A9 579 aaKnown RBP2.28□□□□□ -2.04
TTC3-220ENST00000487711 N6AMT1Q9Y5N5 214 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 MYH6P13533 1939 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 CCDC88AQ3V6T2 1871 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 MYO5AQ9Y4I1 1855 aaKnown RBP2.28□□□□□ -2.04
TTC3-220ENST00000487711 CASZ1Q86V15 1759 aa2.28□□□□□ -2.04
TTC3-220ENST00000487711 MYH2Q9UKX2 1941 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 IGLV3-22A0A075B6J6 115 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 LOC100653049A0A140TA62 436 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 SMCO3A2RU48 225 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 E7EWF7 191 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 ZNF701M0R085 212 aaPredicted RBP2.27□□□□□ -2.05
TTC3-220ENST00000487711 B4GALT5O43286 388 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 KRT34O76011 436 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 ERCC1P07992 297 aaPredicted RBP2.27□□□□□ -2.05
TTC3-220ENST00000487711 ZNF286BP0CG31 522 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 CALM1P0DP23 149 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 CALM2P0DP24 149 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 CALM3P0DP25 149 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 NEFHP12036 1026 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 TNNI1P19237 187 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 GSTM3P21266 225 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 CD9P21926 228 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 OMGP23515 440 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 U2AF2P26368 475 aaKnown RBP eCLIP2.27□□□□□ -2.051e-7■■□□□ 14.1
TTC3-220ENST00000487711 VHLP40337 213 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 PPP1R2P41236 205 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 ACLYP53396 1101 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 ITIH4Q14624 930 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 TGFBIQ15582 683 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 TTLL9Q3SXZ7 439 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 ABCA11PQ4W5N1 156 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 PLCXD3Q63HM9 321 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 SLC8B1Q6J4K2 584 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 SLC25A48Q6ZT89 311 aaKnown RBP2.27□□□□□ -2.05
TTC3-220ENST00000487711 PIANPQ8IYJ0 282 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 MICU2Q8IYU8 434 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 GABRG1Q8N1C3 465 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 LINC00301Q8NCQ3 95 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 OR4F6Q8NGB9 312 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 SDR42E1Q8WUS8 393 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 TOP1MTQ969P6 601 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.27□□□□□ -2.05
TTC3-220ENST00000487711 LRRC39Q96DD0 335 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 IFT74Q96LB3 600 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 ZNF578Q96N58 590 aaPredicted RBP2.27□□□□□ -2.05
TTC3-220ENST00000487711 CNN2Q99439 309 aaKnown RBP2.27□□□□□ -2.05
TTC3-220ENST00000487711 FMO2Q99518 471 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 BLZF1Q9H2G9 400 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 BOLA2Q9H3K6 86 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 RGCCQ9H4X1 137 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 ELOVL6Q9H5J4 265 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 HAUS4Q9H6D7 363 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 NOX3Q9HBY0 568 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 LYRM4Q9HD34 91 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 SLC40A1Q9NP59 571 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 ADAP2Q9NPF8 381 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 C20orf96Q9NUD7 363 aaPredicted RBP2.27□□□□□ -2.05
TTC3-220ENST00000487711 ZMAT5Q9UDW3 170 aaKnown RBP2.27□□□□□ -2.05
TTC3-220ENST00000487711 F11RQ9Y624 299 aaKnown RBP2.27□□□□□ -2.05
TTC3-220ENST00000487711 NHSQ6T4R5 1651 aa2.27□□□□□ -2.05
TTC3-220ENST00000487711 CACNA1SQ13698 1873 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 ROBO3Q96MS0 1386 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 LRRC37AA6NMS7 1700 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 LY75O60449 1722 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 DDX60LQ5H9U9 1706 aaKnown RBP2.26□□□□□ -2.05
TTC3-220ENST00000487711 ABCB11O95342 1321 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 CIB4A0PJX0 185 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 CHST1O43916 411 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 STX10O60499 249 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 FLOT1O75955 427 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 DEXIO95424 95 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 CSTAP01040 98 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 UBTFL6P0CB48 400 aaPredicted RBP2.26□□□□□ -2.05
TTC3-220ENST00000487711 SMIM10L1P0DMW3 83 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 PGAM1P18669 254 aa2.26□□□□□ -2.05
TTC3-220ENST00000487711 GPR6P46095 362 aaPredicted RBP2.26□□□□□ -2.05
TTC3-220ENST00000487711 YAP1P46937 504 aaKnown RBP2.26□□□□□ -2.05
TTC3-220ENST00000487711 SUB1P53999 127 aaKnown RBP eCLIP2.26□□□□□ -2.05
TTC3-220ENST00000487711 CLDN18P56856 261 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms