RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 TRIB1Q96RU8 372 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 ABCB10Q9NRK6 738 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 TAS2R4Q9NYW5 299 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 PRSS50Q9UI38 385 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 ATPIF1Q9UII2 106 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 SPATA2Q9UM82 520 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 TP53TG5Q9Y2B4 290 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 CACNA1AO00555 2505 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 MAP1BP46821 2468 aaKnown RBP8.26□□□□□ -1.09
SF3B1-211ENST00000487698 ATMQ13315 3056 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 PIEZO2Q9H5I5 2752 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 A0A1B0GVI7 797 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 ISPDA4D126 451 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 ANXA2P2A6NMY6 339 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 F5H5K5 113 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 CRYABP02511 175 aaKnown RBP8.25□□□□□ -1.09
SF3B1-211ENST00000487698 APOA1P02647 267 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 ANXA2P07355 339 aaKnown RBP8.25□□□□□ -1.09
SF3B1-211ENST00000487698 PSMD7P51665 324 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 TMPRSS3P57727 454 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 HGFACQ04756 655 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 FAPQ12884 760 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 RGS21Q2M5E4 152 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 FBXW9Q5XUX1 488 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 FAM166AQ6J272 317 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 ZNF529Q6P280 563 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 DRAM2Q6UX65 266 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 Q6ZSR3 168 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 P4HA3Q7Z4N8 544 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 ABHD12BQ7Z5M8 362 aaPredicted RBP8.25□□□□□ -1.09
SF3B1-211ENST00000487698 NAA40Q86UY6 237 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 LYPD6Q86Y78 171 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 GDPD1Q8N9F7 314 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 OR5M9Q8NGP3 310 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 SNRNP27Q8WVK2 155 aaKnown RBP8.25□□□□□ -1.09
SF3B1-211ENST00000487698 WNT2BQ93097 391 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 CMTM3Q96MX0 182 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 GPR137Q96N19 417 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 MRI1Q9BV20 369 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 C12orf49Q9H741 205 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 GPR84Q9NQS5 396 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 UPB1Q9UBR1 384 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 CKLFQ9UBR5 152 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 TLN1Q9Y490 2541 aaKnown RBP8.25□□□□□ -1.09
SF3B1-211ENST00000487698 NCOR2Q9Y618 2525 aa8.25□□□□□ -1.09
SF3B1-211ENST00000487698 AHRRA9YTQ3 701 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 IL18BPO95998 194 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 ITGA5P08648 1049 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 CALCBP10092 127 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 AZGP1P25311 298 aaKnown RBP8.24□□□□□ -1.09
SF3B1-211ENST00000487698 UCNP55089 124 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 SCAND1P57086 179 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 P2RY14Q15391 338 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 SFRP5Q5T4F7 317 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 C9orf135Q5VTT2 229 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 TFAP2EQ6VUC0 442 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 FAM214BQ7L5A3 538 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 UBE2J2Q8N2K1 259 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 C9orf106Q8NAJ2 232 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 OR4M1Q8NGD0 313 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 OR51A2Q8NGJ7 313 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 AKR7LQ8NHP1 331 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 EXTL1Q92935 676 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 ADAT3Q96EY9 351 aaPredicted RBP8.24□□□□□ -1.09
SF3B1-211ENST00000487698 LYZL4Q96KX0 146 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 SOX7Q9BT81 388 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 LIN7BQ9HAP6 207 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 EXTL2Q9UBQ6 330 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 MYO7BQ6PIF6 2116 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 LOC390937A0A1W2PQ73 354 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 ZNF503-AS2A6NEH8 195 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 FAM25AB3EWG3 89 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 FAM25CB3EWG5 89 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 FAM25GB3EWG6 89 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 SLC17A2O00624 439 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 MPGP29372 298 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 DDOSTP39656 456 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 HTR5AP47898 357 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 SLC6A9P48067 706 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 TPTEP56180 551 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 CLDN12P56749 244 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 OXA1LQ15070 435 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 BAK1Q16611 211 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 SLC36A2Q495M3 483 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 PABPC1L2AQ5JQF8 200 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 UBE2NLQ5JXB2 153 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 NSUN5P2Q63ZY6 315 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 ZNF324BQ6AW86 544 aaPredicted RBP8.24□□□□□ -1.09
SF3B1-211ENST00000487698 Q6ZNX1 250 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 DCDC5Q6ZRR9 648 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 DOK3Q7L591 496 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 LUZP2Q86TE4 346 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 GCNT2Q8N0V5 402 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 OR52H1Q8NGJ2 320 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 OR1K1Q8NGR3 316 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 ZNF671Q8TAW3 534 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 FGGYQ96C11 551 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 SLC25A38Q96DW6 304 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 PGAM5Q96HS1 289 aa8.24□□□□□ -1.09
SF3B1-211ENST00000487698 C14orf119Q9NWQ9 140 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms