RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 IGHV2-70DA0A0C4DH43 119 aa10.19□□□□□ -0.78
VPS16-208ENST00000487461 KIR2DS1A0A191URI9 304 aa10.19□□□□□ -0.78
VPS16-208ENST00000487461 LRRC30A6NM36 301 aa10.19□□□□□ -0.78
VPS16-208ENST00000487461 OR10H3O60404 316 aa10.19□□□□□ -0.78
VPS16-208ENST00000487461 FSTL3O95633 263 aa10.19□□□□□ -0.78
VPS16-208ENST00000487461 LCATP04180 440 aa10.19□□□□□ -0.78
VPS16-208ENST00000487461 PPIAL4GP0DN37 164 aa10.19□□□□□ -0.78
VPS16-208ENST00000487461 RPS2P15880 293 aaKnown RBP10.19□□□□□ -0.78
VPS16-208ENST00000487461 MSX2P35548 267 aaPredicted RBP10.19□□□□□ -0.78
VPS16-208ENST00000487461 GSSP48637 474 aa10.19□□□□□ -0.78
VPS16-208ENST00000487461 GNB2P62879 340 aa10.19□□□□□ -0.78
VPS16-208ENST00000487461 GK2Q14410 553 aaPredicted RBP10.19□□□□□ -0.78
VPS16-208ENST00000487461 SLC9A3R2Q15599 337 aa10.19□□□□□ -0.78
VPS16-208ENST00000487461 ZNF404Q494X3 552 aa10.19□□□□□ -0.78
VPS16-208ENST00000487461 SLC36A3Q495N2 470 aa10.19□□□□□ -0.78
VPS16-208ENST00000487461 SLC35F1Q5T1Q4 408 aa10.19□□□□□ -0.78
VPS16-208ENST00000487461 LYPD2Q6UXB3 125 aa10.19□□□□□ -0.78
VPS16-208ENST00000487461 BTNL3Q6UXE8 466 aa10.19□□□□□ -0.78
VPS16-208ENST00000487461 OR2AJ1Q8NGZ0 328 aa10.19□□□□□ -0.78
VPS16-208ENST00000487461 TAF15Q92804 592 aaKnown RBP eCLIP10.19□□□□□ -0.78
VPS16-208ENST00000487461 SLCO4A1Q96BD0 722 aa10.19□□□□□ -0.78
VPS16-208ENST00000487461 NEIL1Q96FI4 390 aaPredicted RBP10.19□□□□□ -0.78
VPS16-208ENST00000487461 FN3KQ9H479 309 aa10.19□□□□□ -0.78
VPS16-208ENST00000487461 MRPL22Q9NWU5 206 aaKnown RBP10.19□□□□□ -0.78
VPS16-208ENST00000487461 TMPRSS2O15393 492 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 IDH3BO43837 385 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 PLATP00750 562 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 HLA-DQA2P01906 255 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 NOS3P29474 1203 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 GATA4P43694 442 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 RAD23AP54725 363 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 HOXA4Q00056 320 aaPredicted RBP10.18□□□□□ -0.78
VPS16-208ENST00000487461 TRAP1Q12931 704 aaKnown RBP10.18□□□□□ -0.78
VPS16-208ENST00000487461 ECH1Q13011 328 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 SHISA2Q6UWI4 295 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 C9orf139Q6ZV77 190 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 C1orf87Q8N0U7 546 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 PARP8Q8N3A8 854 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 CELF2-AS1Q8N7Q2 184 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 C19orf18Q8NEA5 215 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 SDR9C7Q8NEX9 313 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 OR8B3Q8NGG8 313 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 Q8TCH9 128 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 GNPDA2Q8TDQ7 276 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 UPRTQ96BW1 309 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 PLEKHA8Q96JA3 519 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 MAP6Q96JE9 813 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 OR8B2Q96RD0 313 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 DDOQ99489 341 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 ATF6BQ99941 703 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 CD300AQ9UGN4 299 aa10.18□□□□□ -0.78
VPS16-208ENST00000487461 C5orf63A6NC05 138 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 CLDN34H7C241 214 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 FAM20BO75063 409 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 RNASE1P07998 156 aaKnown RBP10.17□□□□□ -0.78
VPS16-208ENST00000487461 HSD17B1P14061 328 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 ANOS1P23352 680 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 RRM2P31350 389 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 PYCR1P32322 319 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 CD200P41217 278 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 MTNR1AP48039 350 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 PITPNBP48739 271 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.17□□□□□ -0.78
VPS16-208ENST00000487461 MALLQ13021 153 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 MPPED2Q15777 294 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 CLEC12AQ5QGZ9 265 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 PRAMEF6Q5VXH4 476 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 WDR25Q64LD2 544 aaPredicted RBP10.17□□□□□ -0.78
VPS16-208ENST00000487461 ZNF841Q6ZN19 808 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 ZNF620Q6ZNG0 422 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 PGAP1Q75T13 922 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 OR10S1Q8NGN2 331 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 SPRYD4Q8WW59 207 aaPredicted RBP10.17□□□□□ -0.78
VPS16-208ENST00000487461 ZNRF4Q8WWF5 429 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 ERGIC1Q969X5 290 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 SLC25A28Q96A46 364 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 MCUR1Q96AQ8 359 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 CDRT15Q96T59 188 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 NUDT16L1Q9BRJ7 211 aaKnown RBP10.17□□□□□ -0.78
VPS16-208ENST00000487461 UNKLQ9H9P5 680 aaKnown RBP10.17□□□□□ -0.78
VPS16-208ENST00000487461 ZMAT3Q9HA38 289 aaKnown RBP10.17□□□□□ -0.78
VPS16-208ENST00000487461 IL1RAPQ9NPH3 570 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 UFSP2Q9NUQ7 469 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 MAGEL2Q9UJ55 1249 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 DOCK11Q5JSL3 2073 aa10.17□□□□□ -0.78
VPS16-208ENST00000487461 MDFIC2A0A1B0GVS7 189 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 TVP23AA6NH52 213 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 CD300LBA8K4G0 201 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 ARPC2O15144 300 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 SNX3O60493 162 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 FABP3P05413 133 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 PSKH1P11801 424 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 IRF2P14316 349 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 ZNF823P16415 610 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 CA6P23280 308 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 IFNGR2P38484 337 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 RPS27P42677 84 aaKnown RBP10.16□□□□□ -0.78
VPS16-208ENST00000487461 TPTEP56180 551 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 ZNF92Q03936 586 aa10.16□□□□□ -0.78
VPS16-208ENST00000487461 TSPAN31Q12999 210 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms