RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 MYL2P10916 166 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 RALBP11234 206 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 ICAM2P13598 275 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 GFAPP14136 432 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 NCF1P14598 390 aaPredicted RBP2.34□□□□□ -2.03
LINC00888-204ENST00000487386 ZNF7P17097 686 aaPredicted RBP2.34□□□□□ -2.03
LINC00888-204ENST00000487386 BGNP21810 368 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 MAPK3P27361 379 aaPredicted RBP2.34□□□□□ -2.03
LINC00888-204ENST00000487386 FGF9P31371 208 aaPredicted RBP2.34□□□□□ -2.03
LINC00888-204ENST00000487386 HPCAL1P37235 193 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 MDH1P40925 334 aaKnown RBP2.34□□□□□ -2.03
LINC00888-204ENST00000487386 PMELP40967 661 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 P2RY2P41231 377 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 TTPAP49638 278 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 RGS4P49798 205 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 DAP3P51398 398 aaKnown RBP2.34□□□□□ -2.03
LINC00888-204ENST00000487386 RAP1BP61224 184 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 RPL26P61254 145 aaKnown RBP2.34□□□□□ -2.03
LINC00888-204ENST00000487386 SELENOTP62341 195 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 ACVR1Q04771 509 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 SCGB2A2Q13296 93 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 RIPK1Q13546 671 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 ITIH4Q14624 930 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 PTGES3Q15185 160 aaKnown RBP2.34□□□□□ -2.03
LINC00888-204ENST00000487386 IRF4Q15306 451 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 CST6Q15828 149 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 INAQ16352 499 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 TTLL9Q3SXZ7 439 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 TMEM41BQ5BJD5 291 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 CFAP157Q5JU67 520 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 CTSL3PQ5NE16 218 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 TMEM215Q68D42 235 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 CTRB2Q6GPI1 263 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 CNSTQ6PJW8 725 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 C6orf89Q6UWU4 347 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 TMIGD1Q6UXZ0 262 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 NLRP9Q7RTR0 991 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 SNX20Q7Z614 316 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 TMEM135Q86UB9 458 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 MFSD6LQ8IWD5 586 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 CPNE9Q8IYJ1 553 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 RDH10Q8IZV5 341 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 ZNF561Q8N587 486 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 DHRSXQ8N5I4 330 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 DUSP18Q8NEJ0 188 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 TSTD1Q8NFU3 115 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 OR2T3Q8NH03 318 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 TCP10LQ8TDR4 215 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 TMEM158Q8WZ71 300 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 FAM3CQ92520 227 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 PEX13Q92968 403 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 RAB7BQ96AH8 199 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 ISG20Q96AZ6 181 aaKnown RBP2.34□□□□□ -2.03
LINC00888-204ENST00000487386 ECHDC3Q96DC8 303 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 CHMP6Q96FZ7 201 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 DCUN1D1Q96GG9 259 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 ZNF641Q96N77 438 aaPredicted RBP2.34□□□□□ -2.03
LINC00888-204ENST00000487386 CDX2Q99626 313 aaPredicted RBP2.34□□□□□ -2.03
LINC00888-204ENST00000487386 COPS8Q99627 209 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 GPR21Q99679 349 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 NIPSNAP3BQ9BS92 247 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 TMEM109Q9BVC6 243 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 PLA2G2FQ9BZM2 168 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 LINC00597Q9H2U6 94 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 FAM96AQ9H5X1 160 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 C8orf33Q9H7E9 229 aaPredicted RBP2.34□□□□□ -2.03
LINC00888-204ENST00000487386 EML4Q9HC35 981 aaKnown RBP2.34□□□□□ -2.03
LINC00888-204ENST00000487386 FGFR1OP2Q9NVK5 253 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 NLE1Q9NVX2 485 aaPredicted RBP2.34□□□□□ -2.03
LINC00888-204ENST00000487386 SMOXQ9NWM0 555 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 SLC17A7Q9P2U7 560 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 NPIPA1Q9UND3 350 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 RPL26L1Q9UNX3 145 aaKnown RBP2.34□□□□□ -2.03
LINC00888-204ENST00000487386 FIS1Q9Y3D6 152 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 TNRC18O15417 2968 aaPredicted RBP2.34□□□□□ -2.04
LINC00888-204ENST00000487386 PRRC2BQ5JSZ5 2229 aaKnown RBP2.33□□□□□ -2.04
LINC00888-204ENST00000487386 A0A0G2JLM5 398 aa2.33□□□□□ -2.04
LINC00888-204ENST00000487386 CXorf51AA0A1B0GTR3 108 aa2.33□□□□□ -2.04
LINC00888-204ENST00000487386 A8MT66 165 aa2.33□□□□□ -2.04
LINC00888-204ENST00000487386 UBXN8O00124 270 aa2.33□□□□□ -2.04
LINC00888-204ENST00000487386 PSMD11O00231 422 aa2.33□□□□□ -2.04
LINC00888-204ENST00000487386 DCTN6O00399 190 aa2.33□□□□□ -2.04
LINC00888-204ENST00000487386 PRMT5O14744 637 aaPredicted RBP2.33□□□□□ -2.04
LINC00888-204ENST00000487386 RAD51BO15315 384 aa2.33□□□□□ -2.04
LINC00888-204ENST00000487386 OR1F1O43749 312 aa2.33□□□□□ -2.04
LINC00888-204ENST00000487386 CXCL13O43927 109 aa2.33□□□□□ -2.04
LINC00888-204ENST00000487386 OR1I1O60431 355 aa2.33□□□□□ -2.04
LINC00888-204ENST00000487386 PLIN3O60664 434 aa2.33□□□□□ -2.04
LINC00888-204ENST00000487386 SMIM24O75264 130 aa2.33□□□□□ -2.04
LINC00888-204ENST00000487386 TNFSF13O75888 250 aa2.33□□□□□ -2.04
LINC00888-204ENST00000487386 TRIM16O95361 564 aa2.33□□□□□ -2.04
LINC00888-204ENST00000487386 FTH1P02794 183 aa2.33□□□□□ -2.04
LINC00888-204ENST00000487386 P04436 131 aa2.33□□□□□ -2.04
LINC00888-204ENST00000487386 SERPINE1P05121 402 aa2.33□□□□□ -2.04
LINC00888-204ENST00000487386 OR56A5P0C7T3 313 aa2.33□□□□□ -2.04
LINC00888-204ENST00000487386 TDGF1P13385 188 aa2.33□□□□□ -2.04
LINC00888-204ENST00000487386 TAC1P20366 129 aa2.33□□□□□ -2.04
LINC00888-204ENST00000487386 OTX2P32243 289 aa2.33□□□□□ -2.04
LINC00888-204ENST00000487386 RPA3P35244 121 aaPredicted RBP2.33□□□□□ -2.04
LINC00888-204ENST00000487386 MAGEA12P43365 314 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms